data_3S0B # _model_server_result.job_id JlenZzvMWhzDT5HJGbLj3g _model_server_result.datetime_utc '2025-01-11 06:57:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3s0b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":120}' # _entry.id 3S0B # _exptl.entry_id 3S0B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 219.281 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-phenylnaphthalen-1-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3S0B _cell.length_a 32.38 _cell.length_b 37.11 _cell.length_c 89.75 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3S0B _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 17 A CYS 17 1_555 A SG CYS 49 A CYS 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf2 A SG CYS 88 A CYS 88 1_555 A SG CYS 106 A CYS 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? # _chem_comp.formula 'C16 H13 N' _chem_comp.formula_weight 219.281 _chem_comp.id FNA _chem_comp.mon_nstd_flag . _chem_comp.name N-phenylnaphthalen-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C3 FNA sing 83 n y C1 H1 FNA sing 84 n n N1 C4 FNA sing 85 n n N1 HN1 FNA sing 86 n n C2 C1 FNA doub 87 n y C2 H2 FNA sing 88 n n C3 H3 FNA sing 89 n n C4 C6 FNA doub 90 n y C4 C2 FNA sing 91 n y C5 C3 FNA doub 92 n y C5 H5 FNA sing 93 n n C6 C5 FNA sing 94 n y C6 H6 FNA sing 95 n n C7 C15 FNA sing 96 n y C8 C7 FNA doub 97 n y C8 C14 FNA sing 98 n y C9 N1 FNA sing 99 n n C9 C7 FNA sing 100 n y C10 C8 FNA sing 101 n y C10 H110 FNA sing 102 n n C11 C9 FNA doub 103 n y C11 H11 FNA sing 104 n n C12 C11 FNA sing 105 n y C12 C10 FNA doub 106 n y C12 H112 FNA sing 107 n n C13 C16 FNA sing 108 n y C13 H13 FNA sing 109 n n C14 C13 FNA doub 110 n y C14 H14 FNA sing 111 n n C15 C16 FNA doub 112 n y C15 H15 FNA sing 113 n n C16 H16 FNA sing 114 n n # _atom_sites.entry_id 3S0B _atom_sites.fract_transf_matrix[1][1] 0.030883 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026947 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011142 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FNA A 1 120 1 FNA FNA . C 3 HOH A 1 121 121 HOH HOH . C 3 HOH A 2 122 122 HOH HOH . C 3 HOH A 3 123 123 HOH HOH . C 3 HOH A 4 124 124 HOH HOH . C 3 HOH A 5 125 125 HOH HOH . C 3 HOH A 6 126 126 HOH HOH . C 3 HOH A 7 127 127 HOH HOH . C 3 HOH A 8 128 128 HOH HOH . C 3 HOH A 9 129 129 HOH HOH . C 3 HOH A 10 130 130 HOH HOH . C 3 HOH A 11 131 131 HOH HOH . C 3 HOH A 12 132 132 HOH HOH . C 3 HOH A 13 133 133 HOH HOH . C 3 HOH A 14 134 134 HOH HOH . C 3 HOH A 15 135 135 HOH HOH . C 3 HOH A 16 136 136 HOH HOH . C 3 HOH A 17 137 137 HOH HOH . C 3 HOH A 18 138 138 HOH HOH . C 3 HOH A 19 139 139 HOH HOH . C 3 HOH A 20 140 140 HOH HOH . C 3 HOH A 21 141 141 HOH HOH . C 3 HOH A 22 142 142 HOH HOH . C 3 HOH A 23 143 143 HOH HOH . C 3 HOH A 24 144 144 HOH HOH . C 3 HOH A 25 145 145 HOH HOH . C 3 HOH A 26 146 146 HOH HOH . C 3 HOH A 27 147 147 HOH HOH . C 3 HOH A 28 148 148 HOH HOH . C 3 HOH A 29 149 149 HOH HOH . C 3 HOH A 30 150 150 HOH HOH . C 3 HOH A 31 151 151 HOH HOH . C 3 HOH A 32 152 152 HOH HOH . C 3 HOH A 33 153 153 HOH HOH . C 3 HOH A 34 154 154 HOH HOH . C 3 HOH A 35 155 155 HOH HOH . C 3 HOH A 36 156 156 HOH HOH . C 3 HOH A 37 157 157 HOH HOH . C 3 HOH A 38 158 158 HOH HOH . C 3 HOH A 39 159 159 HOH HOH . C 3 HOH A 40 160 160 HOH HOH . C 3 HOH A 41 161 161 HOH HOH . C 3 HOH A 42 162 162 HOH HOH . C 3 HOH A 43 163 163 HOH HOH . C 3 HOH A 44 164 164 HOH HOH . C 3 HOH A 45 165 165 HOH HOH . C 3 HOH A 46 166 166 HOH HOH . C 3 HOH A 47 167 167 HOH HOH . C 3 HOH A 48 168 168 HOH HOH . C 3 HOH A 49 169 169 HOH HOH . C 3 HOH A 50 170 170 HOH HOH . C 3 HOH A 51 171 171 HOH HOH . C 3 HOH A 52 172 172 HOH HOH . C 3 HOH A 53 173 1 HOH HOH . C 3 HOH A 54 174 2 HOH HOH . C 3 HOH A 55 175 3 HOH HOH . C 3 HOH A 56 176 4 HOH HOH . C 3 HOH A 57 177 5 HOH HOH . C 3 HOH A 58 178 6 HOH HOH . C 3 HOH A 59 179 7 HOH HOH . C 3 HOH A 60 180 8 HOH HOH . C 3 HOH A 61 181 9 HOH HOH . C 3 HOH A 62 182 10 HOH HOH . C 3 HOH A 63 183 11 HOH HOH . C 3 HOH A 64 184 12 HOH HOH . C 3 HOH A 65 185 13 HOH HOH . C 3 HOH A 66 186 14 HOH HOH . C 3 HOH A 67 187 15 HOH HOH . C 3 HOH A 68 188 16 HOH HOH . C 3 HOH A 69 189 17 HOH HOH . C 3 HOH A 70 190 18 HOH HOH . C 3 HOH A 71 191 19 HOH HOH . C 3 HOH A 72 192 20 HOH HOH . C 3 HOH A 73 193 21 HOH HOH . C 3 HOH A 74 194 22 HOH HOH . C 3 HOH A 75 195 23 HOH HOH . C 3 HOH A 76 196 24 HOH HOH . C 3 HOH A 77 197 25 HOH HOH . C 3 HOH A 78 198 26 HOH HOH . C 3 HOH A 79 199 27 HOH HOH . C 3 HOH A 80 200 28 HOH HOH . C 3 HOH A 81 201 29 HOH HOH . C 3 HOH A 82 202 30 HOH HOH . C 3 HOH A 83 203 31 HOH HOH . C 3 HOH A 84 204 32 HOH HOH . C 3 HOH A 85 205 33 HOH HOH . C 3 HOH A 86 206 34 HOH HOH . C 3 HOH A 87 207 35 HOH HOH . C 3 HOH A 88 208 36 HOH HOH . C 3 HOH A 89 209 37 HOH HOH . C 3 HOH A 90 210 38 HOH HOH . C 3 HOH A 91 211 39 HOH HOH . C 3 HOH A 92 212 40 HOH HOH . C 3 HOH A 93 213 41 HOH HOH . C 3 HOH A 94 214 42 HOH HOH . C 3 HOH A 95 215 43 HOH HOH . C 3 HOH A 96 216 44 HOH HOH . C 3 HOH A 97 217 45 HOH HOH . C 3 HOH A 98 218 46 HOH HOH . C 3 HOH A 99 219 47 HOH HOH . C 3 HOH A 100 220 48 HOH HOH . C 3 HOH A 101 221 49 HOH HOH . C 3 HOH A 102 222 50 HOH HOH . C 3 HOH A 103 223 51 HOH HOH . C 3 HOH A 104 224 52 HOH HOH . C 3 HOH A 105 225 53 HOH HOH . C 3 HOH A 106 226 54 HOH HOH . C 3 HOH A 107 227 55 HOH HOH . C 3 HOH A 108 228 56 HOH HOH . C 3 HOH A 109 229 57 HOH HOH . C 3 HOH A 110 230 58 HOH HOH . C 3 HOH A 111 231 59 HOH HOH . C 3 HOH A 112 232 60 HOH HOH . C 3 HOH A 113 233 61 HOH HOH . C 3 HOH A 114 234 62 HOH HOH . C 3 HOH A 115 235 63 HOH HOH . C 3 HOH A 116 236 64 HOH HOH . C 3 HOH A 117 237 65 HOH HOH . C 3 HOH A 118 238 66 HOH HOH . C 3 HOH A 119 239 67 HOH HOH . C 3 HOH A 120 240 68 HOH HOH . C 3 HOH A 121 241 69 HOH HOH . C 3 HOH A 122 242 70 HOH HOH . C 3 HOH A 123 243 71 HOH HOH . C 3 HOH A 124 244 72 HOH HOH . C 3 HOH A 125 245 73 HOH HOH . C 3 HOH A 126 246 74 HOH HOH . C 3 HOH A 127 247 75 HOH HOH . C 3 HOH A 128 248 76 HOH HOH . C 3 HOH A 129 249 77 HOH HOH . C 3 HOH A 130 250 78 HOH HOH . C 3 HOH A 131 251 79 HOH HOH . C 3 HOH A 132 252 80 HOH HOH . C 3 HOH A 133 253 81 HOH HOH . C 3 HOH A 134 254 82 HOH HOH . C 3 HOH A 135 255 83 HOH HOH . C 3 HOH A 136 256 84 HOH HOH . C 3 HOH A 137 257 85 HOH HOH . C 3 HOH A 138 258 86 HOH HOH . C 3 HOH A 139 259 87 HOH HOH . C 3 HOH A 140 260 88 HOH HOH . C 3 HOH A 141 261 89 HOH HOH . C 3 HOH A 142 262 90 HOH HOH . C 3 HOH A 143 263 91 HOH HOH . C 3 HOH A 144 264 92 HOH HOH . C 3 HOH A 145 265 93 HOH HOH . C 3 HOH A 146 266 94 HOH HOH . C 3 HOH A 147 267 95 HOH HOH . C 3 HOH A 148 268 96 HOH HOH . C 3 HOH A 149 269 97 HOH HOH . C 3 HOH A 150 270 98 HOH HOH . C 3 HOH A 151 271 99 HOH HOH . C 3 HOH A 152 272 100 HOH HOH . C 3 HOH A 153 273 101 HOH HOH . C 3 HOH A 154 274 102 HOH HOH . C 3 HOH A 155 275 103 HOH HOH . C 3 HOH A 156 276 104 HOH HOH . C 3 HOH A 157 277 105 HOH HOH . C 3 HOH A 158 278 106 HOH HOH . C 3 HOH A 159 279 107 HOH HOH . C 3 HOH A 160 280 108 HOH HOH . C 3 HOH A 161 281 109 HOH HOH . C 3 HOH A 162 282 110 HOH HOH . C 3 HOH A 163 283 111 HOH HOH . C 3 HOH A 164 284 112 HOH HOH . C 3 HOH A 165 285 113 HOH HOH . C 3 HOH A 166 286 114 HOH HOH . C 3 HOH A 167 287 115 HOH HOH . C 3 HOH A 168 288 116 HOH HOH . C 3 HOH A 169 289 117 HOH HOH . C 3 HOH A 170 290 118 HOH HOH . C 3 HOH A 171 291 119 HOH HOH . C 3 HOH A 172 292 120 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FNA . . . B 2 -5.415 -7.297 11.503 1 16.96 ? C1 FNA 120 A 1 HETATM 2 N N1 FNA . . . B 2 -8.662 -6.31 9.912 1 17.65 ? N1 FNA 120 A 1 HETATM 3 C C2 FNA . . . B 2 -6.698 -7.425 10.944 1 16.35 ? C2 FNA 120 A 1 HETATM 4 C C3 FNA . . . B 2 -4.819 -5.986 11.611 1 17.85 ? C3 FNA 120 A 1 HETATM 5 C C4 FNA . . . B 2 -7.348 -6.299 10.517 1 16.13 ? C4 FNA 120 A 1 HETATM 6 C C5 FNA . . . B 2 -5.476 -4.916 11.198 1 17.73 ? C5 FNA 120 A 1 HETATM 7 C C6 FNA . . . B 2 -6.79 -5.046 10.623 1 17.5 ? C6 FNA 120 A 1 HETATM 8 C C7 FNA . . . B 2 -9.759 -8.312 10.992 1 15.57 ? C7 FNA 120 A 1 HETATM 9 C C8 FNA . . . B 2 -10.375 -9.528 10.853 1 16.35 ? C8 FNA 120 A 1 HETATM 10 C C9 FNA . . . B 2 -9.593 -7.422 9.791 1 16.35 ? C9 FNA 120 A 1 HETATM 11 C C10 FNA . . . B 2 -10.834 -10.087 9.527 1 17.85 ? C10 FNA 120 A 1 HETATM 12 C C11 FNA . . . B 2 -9.686 -8.075 8.493 1 15.25 ? C11 FNA 120 A 1 HETATM 13 C C12 FNA . . . B 2 -10.591 -9.188 8.356 1 14.7 ? C12 FNA 120 A 1 HETATM 14 C C13 FNA . . . B 2 -10.208 -9.907 13.208 1 18.11 ? C13 FNA 120 A 1 HETATM 15 C C14 FNA . . . B 2 -10.598 -10.339 12.011 1 19.28 ? C14 FNA 120 A 1 HETATM 16 C C15 FNA . . . B 2 -9.411 -7.852 12.255 1 17.42 ? C15 FNA 120 A 1 HETATM 17 C C16 FNA . . . B 2 -9.626 -8.629 13.35 1 18.91 ? C16 FNA 120 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 17 #