data_3S0K # _model_server_result.job_id GMRQEoRqK4XNRHqOiIZLBQ _model_server_result.datetime_utc '2025-03-03 02:42:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3s0k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":240}' # _entry.id 3S0K # _exptl.entry_id 3S0K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.693 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICKEL (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3S0K _cell.length_a 50.659 _cell.length_b 61.646 _cell.length_c 67.214 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3S0K _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 7 A HIS 7 1_555 C NI NI . A NI 240 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc2 A OE1 GLU 25 A GLU 25 1_555 C NI NI . A NI 240 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc3 A OE2 GLU 25 A GLU 25 1_555 C NI NI . A NI 240 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc4 A NE2 HIS 29 A HIS 29 1_555 C NI NI . A NI 240 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? # _chem_comp.formula 'Ni 2' _chem_comp.formula_weight 58.693 _chem_comp.id NI _chem_comp.mon_nstd_flag . _chem_comp.name 'NICKEL (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3S0K _atom_sites.fract_transf_matrix[1][1] 0.01974 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016222 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014878 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 03F A 1 210 210 03F 03F . C 3 NI A 1 240 240 NI NI . D 4 HOH A 1 211 211 HOH HOH . D 4 HOH A 2 212 212 HOH HOH . D 4 HOH A 3 213 213 HOH HOH . D 4 HOH A 4 214 214 HOH HOH . D 4 HOH A 5 215 215 HOH HOH . D 4 HOH A 6 216 216 HOH HOH . D 4 HOH A 7 217 217 HOH HOH . D 4 HOH A 8 218 218 HOH HOH . D 4 HOH A 9 219 219 HOH HOH . D 4 HOH A 10 220 220 HOH HOH . D 4 HOH A 11 221 221 HOH HOH . D 4 HOH A 12 222 222 HOH HOH . D 4 HOH A 13 223 223 HOH HOH . D 4 HOH A 14 224 224 HOH HOH . D 4 HOH A 15 225 225 HOH HOH . D 4 HOH A 16 226 226 HOH HOH . D 4 HOH A 17 227 227 HOH HOH . D 4 HOH A 18 228 228 HOH HOH . D 4 HOH A 19 229 229 HOH HOH . D 4 HOH A 20 230 230 HOH HOH . D 4 HOH A 21 231 231 HOH HOH . D 4 HOH A 22 232 232 HOH HOH . D 4 HOH A 23 233 233 HOH HOH . D 4 HOH A 24 234 234 HOH HOH . D 4 HOH A 25 235 235 HOH HOH . D 4 HOH A 26 236 236 HOH HOH . D 4 HOH A 27 237 237 HOH HOH . D 4 HOH A 28 238 238 HOH HOH . D 4 HOH A 29 239 239 HOH HOH . D 4 HOH A 30 241 241 HOH HOH . D 4 HOH A 31 242 242 HOH HOH . D 4 HOH A 32 243 243 HOH HOH . D 4 HOH A 33 244 244 HOH HOH . D 4 HOH A 34 245 245 HOH HOH . D 4 HOH A 35 246 246 HOH HOH . D 4 HOH A 36 247 247 HOH HOH . D 4 HOH A 37 248 248 HOH HOH . D 4 HOH A 38 249 249 HOH HOH . D 4 HOH A 39 250 250 HOH HOH . D 4 HOH A 40 251 251 HOH HOH . D 4 HOH A 41 252 252 HOH HOH . D 4 HOH A 42 253 253 HOH HOH . D 4 HOH A 43 254 254 HOH HOH . D 4 HOH A 44 255 255 HOH HOH . D 4 HOH A 45 256 256 HOH HOH . D 4 HOH A 46 257 257 HOH HOH . D 4 HOH A 47 258 258 HOH HOH . D 4 HOH A 48 259 259 HOH HOH . D 4 HOH A 49 260 260 HOH HOH . D 4 HOH A 50 261 261 HOH HOH . D 4 HOH A 51 262 262 HOH HOH . D 4 HOH A 52 263 263 HOH HOH . D 4 HOH A 53 264 264 HOH HOH . D 4 HOH A 54 265 265 HOH HOH . D 4 HOH A 55 266 266 HOH HOH . D 4 HOH A 56 267 267 HOH HOH . D 4 HOH A 57 268 268 HOH HOH . D 4 HOH A 58 269 269 HOH HOH . D 4 HOH A 59 270 270 HOH HOH . D 4 HOH A 60 271 271 HOH HOH . D 4 HOH A 61 272 272 HOH HOH . D 4 HOH A 62 273 273 HOH HOH . D 4 HOH A 63 274 274 HOH HOH . D 4 HOH A 64 275 275 HOH HOH . D 4 HOH A 65 276 276 HOH HOH . D 4 HOH A 66 277 277 HOH HOH . D 4 HOH A 67 278 278 HOH HOH . D 4 HOH A 68 279 279 HOH HOH . D 4 HOH A 69 280 280 HOH HOH . D 4 HOH A 70 281 281 HOH HOH . D 4 HOH A 71 282 282 HOH HOH . D 4 HOH A 72 283 283 HOH HOH . D 4 HOH A 73 284 284 HOH HOH . D 4 HOH A 74 285 285 HOH HOH . D 4 HOH A 75 286 286 HOH HOH . D 4 HOH A 76 287 287 HOH HOH . D 4 HOH A 77 288 288 HOH HOH . D 4 HOH A 78 289 289 HOH HOH . D 4 HOH A 79 290 290 HOH HOH . D 4 HOH A 80 291 291 HOH HOH . D 4 HOH A 81 292 292 HOH HOH . D 4 HOH A 82 293 293 HOH HOH . D 4 HOH A 83 294 294 HOH HOH . D 4 HOH A 84 295 295 HOH HOH . D 4 HOH A 85 296 296 HOH HOH . D 4 HOH A 86 297 297 HOH HOH . D 4 HOH A 87 298 298 HOH HOH . D 4 HOH A 88 299 299 HOH HOH . D 4 HOH A 89 300 300 HOH HOH . D 4 HOH A 90 301 301 HOH HOH . D 4 HOH A 91 302 302 HOH HOH . D 4 HOH A 92 303 303 HOH HOH . D 4 HOH A 93 304 304 HOH HOH . D 4 HOH A 94 305 305 HOH HOH . D 4 HOH A 95 306 306 HOH HOH . D 4 HOH A 96 307 307 HOH HOH . D 4 HOH A 97 308 308 HOH HOH . D 4 HOH A 98 309 309 HOH HOH . D 4 HOH A 99 310 310 HOH HOH . D 4 HOH A 100 311 311 HOH HOH . D 4 HOH A 101 312 312 HOH HOH . D 4 HOH A 102 313 313 HOH HOH . D 4 HOH A 103 314 314 HOH HOH . D 4 HOH A 104 315 315 HOH HOH . D 4 HOH A 105 316 316 HOH HOH . D 4 HOH A 106 317 317 HOH HOH . D 4 HOH A 107 318 318 HOH HOH . D 4 HOH A 108 319 319 HOH HOH . D 4 HOH A 109 320 320 HOH HOH . D 4 HOH A 110 321 321 HOH HOH . D 4 HOH A 111 322 322 HOH HOH . D 4 HOH A 112 323 323 HOH HOH . D 4 HOH A 113 324 324 HOH HOH . D 4 HOH A 114 325 325 HOH HOH . D 4 HOH A 115 326 326 HOH HOH . D 4 HOH A 116 327 327 HOH HOH . D 4 HOH A 117 328 328 HOH HOH . D 4 HOH A 118 329 329 HOH HOH . D 4 HOH A 119 330 330 HOH HOH . D 4 HOH A 120 331 331 HOH HOH . D 4 HOH A 121 332 332 HOH HOH . D 4 HOH A 122 333 333 HOH HOH . D 4 HOH A 123 334 334 HOH HOH . D 4 HOH A 124 335 335 HOH HOH . D 4 HOH A 125 336 336 HOH HOH . D 4 HOH A 126 337 337 HOH HOH . D 4 HOH A 127 338 338 HOH HOH . D 4 HOH A 128 339 339 HOH HOH . D 4 HOH A 129 340 340 HOH HOH . D 4 HOH A 130 341 341 HOH HOH . D 4 HOH A 131 342 342 HOH HOH . D 4 HOH A 132 343 343 HOH HOH . D 4 HOH A 133 344 344 HOH HOH . D 4 HOH A 134 345 345 HOH HOH . D 4 HOH A 135 346 346 HOH HOH . D 4 HOH A 136 347 347 HOH HOH . D 4 HOH A 137 348 348 HOH HOH . D 4 HOH A 138 349 349 HOH HOH . D 4 HOH A 139 350 350 HOH HOH . D 4 HOH A 140 351 351 HOH HOH . D 4 HOH A 141 352 352 HOH HOH . D 4 HOH A 142 353 353 HOH HOH . D 4 HOH A 143 354 354 HOH HOH . D 4 HOH A 144 355 355 HOH HOH . D 4 HOH A 145 356 356 HOH HOH . D 4 HOH A 146 357 357 HOH HOH . D 4 HOH A 147 358 358 HOH HOH . D 4 HOH A 148 359 359 HOH HOH . D 4 HOH A 149 360 360 HOH HOH . D 4 HOH A 150 361 361 HOH HOH . D 4 HOH A 151 362 362 HOH HOH . D 4 HOH A 152 363 363 HOH HOH . D 4 HOH A 153 364 364 HOH HOH . D 4 HOH A 154 365 365 HOH HOH . D 4 HOH A 155 366 366 HOH HOH . D 4 HOH A 156 367 367 HOH HOH . D 4 HOH A 157 368 368 HOH HOH . D 4 HOH A 158 369 369 HOH HOH . D 4 HOH A 159 370 370 HOH HOH . D 4 HOH A 160 371 371 HOH HOH . D 4 HOH A 161 372 372 HOH HOH . D 4 HOH A 162 373 373 HOH HOH . D 4 HOH A 163 374 374 HOH HOH . D 4 HOH A 164 375 375 HOH HOH . D 4 HOH A 165 376 376 HOH HOH . D 4 HOH A 166 377 377 HOH HOH . D 4 HOH A 167 378 378 HOH HOH . D 4 HOH A 168 379 379 HOH HOH . D 4 HOH A 169 380 380 HOH HOH . D 4 HOH A 170 381 381 HOH HOH . D 4 HOH A 171 382 382 HOH HOH . D 4 HOH A 172 383 383 HOH HOH . D 4 HOH A 173 384 384 HOH HOH . D 4 HOH A 174 385 385 HOH HOH . D 4 HOH A 175 386 386 HOH HOH . D 4 HOH A 176 387 387 HOH HOH . D 4 HOH A 177 388 388 HOH HOH . D 4 HOH A 178 389 389 HOH HOH . D 4 HOH A 179 390 390 HOH HOH . D 4 HOH A 180 391 391 HOH HOH . D 4 HOH A 181 392 392 HOH HOH . D 4 HOH A 182 393 393 HOH HOH . D 4 HOH A 183 394 394 HOH HOH . D 4 HOH A 184 395 395 HOH HOH . D 4 HOH A 185 396 396 HOH HOH . D 4 HOH A 186 397 397 HOH HOH . D 4 HOH A 187 398 398 HOH HOH . D 4 HOH A 188 399 399 HOH HOH . D 4 HOH A 189 400 400 HOH HOH . D 4 HOH A 190 401 401 HOH HOH . D 4 HOH A 191 402 402 HOH HOH . D 4 HOH A 192 403 403 HOH HOH . D 4 HOH A 193 404 404 HOH HOH . D 4 HOH A 194 405 405 HOH HOH . D 4 HOH A 195 406 406 HOH HOH . D 4 HOH A 196 407 407 HOH HOH . D 4 HOH A 197 408 408 HOH HOH . D 4 HOH A 198 409 409 HOH HOH . D 4 HOH A 199 410 410 HOH HOH . D 4 HOH A 200 411 411 HOH HOH . D 4 HOH A 201 412 412 HOH HOH . D 4 HOH A 202 413 413 HOH HOH . D 4 HOH A 203 414 414 HOH HOH . D 4 HOH A 204 415 415 HOH HOH . D 4 HOH A 205 416 416 HOH HOH . D 4 HOH A 206 417 417 HOH HOH . D 4 HOH A 207 418 418 HOH HOH . D 4 HOH A 208 419 419 HOH HOH . D 4 HOH A 209 420 420 HOH HOH . D 4 HOH A 210 421 421 HOH HOH . D 4 HOH A 211 422 422 HOH HOH . D 4 HOH A 212 423 423 HOH HOH . D 4 HOH A 213 424 424 HOH HOH . D 4 HOH A 214 425 425 HOH HOH . D 4 HOH A 215 426 426 HOH HOH . D 4 HOH A 216 427 427 HOH HOH . D 4 HOH A 217 428 428 HOH HOH . D 4 HOH A 218 429 429 HOH HOH . D 4 HOH A 219 430 430 HOH HOH . D 4 HOH A 220 431 431 HOH HOH . D 4 HOH A 221 432 432 HOH HOH . D 4 HOH A 222 433 433 HOH HOH . D 4 HOH A 223 434 434 HOH HOH . D 4 HOH A 224 435 435 HOH HOH . D 4 HOH A 225 436 436 HOH HOH . D 4 HOH A 226 437 437 HOH HOH . D 4 HOH A 227 438 438 HOH HOH . D 4 HOH A 228 439 439 HOH HOH . D 4 HOH A 229 440 440 HOH HOH . D 4 HOH A 230 441 441 HOH HOH . D 4 HOH A 231 442 442 HOH HOH . D 4 HOH A 232 443 443 HOH HOH . D 4 HOH A 233 444 444 HOH HOH . D 4 HOH A 234 445 445 HOH HOH . D 4 HOH A 235 446 446 HOH HOH . D 4 HOH A 236 447 447 HOH HOH . D 4 HOH A 237 448 448 HOH HOH . D 4 HOH A 238 449 449 HOH HOH . D 4 HOH A 239 450 450 HOH HOH . D 4 HOH A 240 451 451 HOH HOH . D 4 HOH A 241 452 452 HOH HOH . D 4 HOH A 242 453 453 HOH HOH . D 4 HOH A 243 454 454 HOH HOH . D 4 HOH A 244 455 455 HOH HOH . D 4 HOH A 245 456 456 HOH HOH . D 4 HOH A 246 457 457 HOH HOH . D 4 HOH A 247 458 458 HOH HOH . D 4 HOH A 248 459 459 HOH HOH . D 4 HOH A 249 460 460 HOH HOH . D 4 HOH A 250 461 461 HOH HOH . D 4 HOH A 251 462 462 HOH HOH . D 4 HOH A 252 463 463 HOH HOH . D 4 HOH A 253 464 464 HOH HOH . D 4 HOH A 254 465 465 HOH HOH . D 4 HOH A 255 466 466 HOH HOH . D 4 HOH A 256 467 467 HOH HOH . D 4 HOH A 257 468 468 HOH HOH . D 4 HOH A 258 469 469 HOH HOH . D 4 HOH A 259 470 470 HOH HOH . D 4 HOH A 260 471 471 HOH HOH . D 4 HOH A 261 472 472 HOH HOH . D 4 HOH A 262 473 473 HOH HOH . D 4 HOH A 263 474 474 HOH HOH . D 4 HOH A 264 475 475 HOH HOH . D 4 HOH A 265 476 476 HOH HOH . D 4 HOH A 266 477 477 HOH HOH . D 4 HOH A 267 478 478 HOH HOH . D 4 HOH A 268 479 479 HOH HOH . D 4 HOH A 269 480 480 HOH HOH . D 4 HOH A 270 481 481 HOH HOH . D 4 HOH A 271 482 482 HOH HOH . D 4 HOH A 272 483 483 HOH HOH . D 4 HOH A 273 484 484 HOH HOH . D 4 HOH A 274 485 485 HOH HOH . D 4 HOH A 275 486 486 HOH HOH . D 4 HOH A 276 487 487 HOH HOH . D 4 HOH A 277 488 488 HOH HOH . D 4 HOH A 278 489 489 HOH HOH . D 4 HOH A 279 490 490 HOH HOH . D 4 HOH A 280 491 491 HOH HOH . D 4 HOH A 281 492 492 HOH HOH . D 4 HOH A 282 493 493 HOH HOH . D 4 HOH A 283 494 494 HOH HOH . D 4 HOH A 284 495 495 HOH HOH . D 4 HOH A 285 496 496 HOH HOH . D 4 HOH A 286 497 497 HOH HOH . D 4 HOH A 287 498 498 HOH HOH . D 4 HOH A 288 499 499 HOH HOH . D 4 HOH A 289 500 500 HOH HOH . D 4 HOH A 290 501 501 HOH HOH . D 4 HOH A 291 502 502 HOH HOH . D 4 HOH A 292 503 503 HOH HOH . D 4 HOH A 293 504 504 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NI _atom_site.label_atom_id NI _atom_site.label_comp_id NI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 16.718 _atom_site.Cartn_y 21.757 _atom_site.Cartn_z 16.75 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NI _atom_site.auth_comp_id NI _atom_site.auth_seq_id 240 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #