data_3S2O # _model_server_result.job_id GvbdfjyP7iNmayqWZRtZFA _model_server_result.datetime_utc '2024-11-04 22:49:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3s2o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":394}' # _entry.id 3S2O # _exptl.entry_id 3S2O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3S2O _cell.length_a 101.88 _cell.length_b 101.88 _cell.length_c 170.181 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3S2O _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 171 A CYS 155 1_555 A SG CYS 375 A CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? disulf ? disulf2 A SG CYS 233 A CYS 217 1_555 A SG CYS 398 A CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 A SG CYS 285 A CYS 269 1_555 A SG CYS 335 A CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3S2O _atom_sites.fract_transf_matrix[1][1] 0.009815 _atom_sites.fract_transf_matrix[1][2] 0.005667 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011334 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005876 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EV6 A 1 393 393 EV6 EV6 . C 3 IOD A 1 394 394 IOD IOD . D 3 IOD A 1 395 395 IOD IOD . E 4 HOH A 1 396 396 HOH HOH . E 4 HOH A 2 397 397 HOH HOH . E 4 HOH A 3 398 398 HOH HOH . E 4 HOH A 4 399 399 HOH HOH . E 4 HOH A 5 400 400 HOH HOH . E 4 HOH A 6 401 401 HOH HOH . E 4 HOH A 7 402 402 HOH HOH . E 4 HOH A 8 403 403 HOH HOH . E 4 HOH A 9 404 404 HOH HOH . E 4 HOH A 10 405 405 HOH HOH . E 4 HOH A 11 406 406 HOH HOH . E 4 HOH A 12 407 407 HOH HOH . E 4 HOH A 13 408 408 HOH HOH . E 4 HOH A 14 409 409 HOH HOH . E 4 HOH A 15 410 410 HOH HOH . E 4 HOH A 16 411 411 HOH HOH . E 4 HOH A 17 412 412 HOH HOH . E 4 HOH A 18 413 413 HOH HOH . E 4 HOH A 19 414 414 HOH HOH . E 4 HOH A 20 415 415 HOH HOH . E 4 HOH A 21 416 416 HOH HOH . E 4 HOH A 22 417 417 HOH HOH . E 4 HOH A 23 418 418 HOH HOH . E 4 HOH A 24 419 419 HOH HOH . E 4 HOH A 25 420 420 HOH HOH . E 4 HOH A 26 421 421 HOH HOH . E 4 HOH A 27 422 422 HOH HOH . E 4 HOH A 28 423 423 HOH HOH . E 4 HOH A 29 424 424 HOH HOH . E 4 HOH A 30 425 425 HOH HOH . E 4 HOH A 31 426 426 HOH HOH . E 4 HOH A 32 427 427 HOH HOH . E 4 HOH A 33 428 428 HOH HOH . E 4 HOH A 34 429 429 HOH HOH . E 4 HOH A 35 430 430 HOH HOH . E 4 HOH A 36 431 431 HOH HOH . E 4 HOH A 37 432 432 HOH HOH . E 4 HOH A 38 433 433 HOH HOH . E 4 HOH A 39 434 434 HOH HOH . E 4 HOH A 40 435 435 HOH HOH . E 4 HOH A 41 436 436 HOH HOH . E 4 HOH A 42 437 437 HOH HOH . E 4 HOH A 43 438 438 HOH HOH . E 4 HOH A 44 439 439 HOH HOH . E 4 HOH A 45 440 440 HOH HOH . E 4 HOH A 46 441 441 HOH HOH . E 4 HOH A 47 442 442 HOH HOH . E 4 HOH A 48 443 443 HOH HOH . E 4 HOH A 49 444 444 HOH HOH . E 4 HOH A 50 445 445 HOH HOH . E 4 HOH A 51 446 446 HOH HOH . E 4 HOH A 52 447 447 HOH HOH . E 4 HOH A 53 448 448 HOH HOH . E 4 HOH A 54 449 449 HOH HOH . E 4 HOH A 55 450 450 HOH HOH . E 4 HOH A 56 451 451 HOH HOH . E 4 HOH A 57 452 452 HOH HOH . E 4 HOH A 58 453 453 HOH HOH . E 4 HOH A 59 454 454 HOH HOH . E 4 HOH A 60 455 455 HOH HOH . E 4 HOH A 61 456 456 HOH HOH . E 4 HOH A 62 457 457 HOH HOH . E 4 HOH A 63 458 458 HOH HOH . E 4 HOH A 64 459 459 HOH HOH . E 4 HOH A 65 460 460 HOH HOH . E 4 HOH A 66 461 461 HOH HOH . E 4 HOH A 67 462 462 HOH HOH . E 4 HOH A 68 463 463 HOH HOH . E 4 HOH A 69 464 464 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -28.803 _atom_site.Cartn_y 30.822 _atom_site.Cartn_z 15.466 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 57.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 394 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #