data_3S30 # _model_server_result.job_id YbilWh0cpFN4BBRAoL6MEQ _model_server_result.datetime_utc '2024-10-25 20:26:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3s30 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":383}' # _entry.id 3S30 # _exptl.entry_id 3S30 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3S30 _cell.length_a 146.745 _cell.length_b 146.745 _cell.length_c 91.51 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3S30 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 182 A GLY 210 1_555 A N MSE 183 A MSE 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C MSE 183 A MSE 211 1_555 A N PRO 184 A PRO 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale3 A C ALA 200 A ALA 228 1_555 A N MSE 201 A MSE 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C MSE 201 A MSE 229 1_555 A N SER 202 A SER 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 A C GLN 260 A GLN 288 1_555 A N MSE 261 A MSE 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale6 A C MSE 261 A MSE 289 1_555 A N LEU 262 A LEU 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale7 A C ASN 275 A ASN 303 1_555 A N MSE 276 A MSE 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale8 A C MSE 276 A MSE 304 1_555 A N VAL 277 A VAL 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale9 B C GLY 182 B GLY 210 1_555 B N MSE 183 B MSE 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale10 B C MSE 183 B MSE 211 1_555 B N PRO 184 B PRO 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale11 B C ALA 200 B ALA 228 1_555 B N MSE 201 B MSE 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale12 B C MSE 201 B MSE 229 1_555 B N SER 202 B SER 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale13 B C GLN 260 B GLN 288 1_555 B N MSE 261 B MSE 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale14 B C MSE 261 B MSE 289 1_555 B N LEU 262 B LEU 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale15 B C ASN 275 B ASN 303 1_555 B N MSE 276 B MSE 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale16 B C MSE 276 B MSE 304 1_555 B N VAL 277 B VAL 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? metalc ? metalc1 A O ASN 105 A ASN 133 1_555 C NA NA . A NA 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc2 A OE2 GLU 107 A GLU 135 1_555 C NA NA . A NA 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.882 ? metalc ? metalc3 A O ASN 165 A ASN 193 1_555 C NA NA . A NA 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc4 A OD1 ASP 343 A ASP 371 1_555 C NA NA . A NA 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc5 B O ASN 105 B ASN 133 1_555 D NA NA . B NA 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc6 B OE2 GLU 107 B GLU 135 1_555 D NA NA . B NA 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.853 ? metalc ? metalc7 B O ASN 165 B ASN 193 1_555 D NA NA . B NA 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc8 B OD1 ASP 343 B ASP 371 1_555 D NA NA . B NA 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3S30 _atom_sites.fract_transf_matrix[1][1] 0.006815 _atom_sites.fract_transf_matrix[1][2] 0.003934 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007869 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010928 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 383 383 NA NA . D 2 NA B 1 384 384 NA NA . E 3 HOH A 1 385 385 HOH HOH . E 3 HOH A 2 386 386 HOH HOH . E 3 HOH A 3 388 388 HOH HOH . E 3 HOH A 4 392 392 HOH HOH . E 3 HOH A 5 394 394 HOH HOH . E 3 HOH A 6 396 396 HOH HOH . E 3 HOH A 7 398 398 HOH HOH . E 3 HOH A 8 399 399 HOH HOH . E 3 HOH A 9 400 400 HOH HOH . E 3 HOH A 10 401 401 HOH HOH . E 3 HOH A 11 402 402 HOH HOH . E 3 HOH A 12 404 404 HOH HOH . E 3 HOH A 13 407 407 HOH HOH . E 3 HOH A 14 408 408 HOH HOH . E 3 HOH A 15 410 410 HOH HOH . E 3 HOH A 16 412 412 HOH HOH . E 3 HOH A 17 415 415 HOH HOH . E 3 HOH A 18 417 417 HOH HOH . E 3 HOH A 19 421 421 HOH HOH . E 3 HOH A 20 424 424 HOH HOH . E 3 HOH A 21 426 426 HOH HOH . E 3 HOH A 22 427 427 HOH HOH . E 3 HOH A 23 428 428 HOH HOH . E 3 HOH A 24 429 429 HOH HOH . E 3 HOH A 25 430 430 HOH HOH . E 3 HOH A 26 431 431 HOH HOH . E 3 HOH A 27 433 433 HOH HOH . E 3 HOH A 28 436 436 HOH HOH . E 3 HOH A 29 438 438 HOH HOH . E 3 HOH A 30 439 439 HOH HOH . E 3 HOH A 31 441 441 HOH HOH . E 3 HOH A 32 444 444 HOH HOH . E 3 HOH A 33 446 446 HOH HOH . E 3 HOH A 34 448 448 HOH HOH . E 3 HOH A 35 449 449 HOH HOH . E 3 HOH A 36 450 450 HOH HOH . E 3 HOH A 37 451 451 HOH HOH . E 3 HOH A 38 453 453 HOH HOH . E 3 HOH A 39 456 456 HOH HOH . E 3 HOH A 40 459 459 HOH HOH . E 3 HOH A 41 460 460 HOH HOH . E 3 HOH A 42 461 461 HOH HOH . E 3 HOH A 43 462 462 HOH HOH . E 3 HOH A 44 463 463 HOH HOH . E 3 HOH A 45 465 465 HOH HOH . E 3 HOH A 46 467 467 HOH HOH . E 3 HOH A 47 469 469 HOH HOH . E 3 HOH A 48 470 470 HOH HOH . E 3 HOH A 49 471 471 HOH HOH . E 3 HOH A 50 472 472 HOH HOH . E 3 HOH A 51 473 473 HOH HOH . E 3 HOH A 52 475 475 HOH HOH . E 3 HOH A 53 476 476 HOH HOH . E 3 HOH A 54 477 477 HOH HOH . E 3 HOH A 55 478 478 HOH HOH . E 3 HOH A 56 483 483 HOH HOH . E 3 HOH A 57 484 484 HOH HOH . E 3 HOH A 58 487 487 HOH HOH . E 3 HOH A 59 489 489 HOH HOH . E 3 HOH A 60 490 490 HOH HOH . E 3 HOH A 61 492 492 HOH HOH . E 3 HOH A 62 495 495 HOH HOH . E 3 HOH A 63 496 496 HOH HOH . E 3 HOH A 64 497 497 HOH HOH . E 3 HOH A 65 498 498 HOH HOH . E 3 HOH A 66 502 502 HOH HOH . E 3 HOH A 67 505 505 HOH HOH . E 3 HOH A 68 506 506 HOH HOH . E 3 HOH A 69 507 507 HOH HOH . E 3 HOH A 70 508 508 HOH HOH . E 3 HOH A 71 509 509 HOH HOH . E 3 HOH A 72 515 515 HOH HOH . E 3 HOH A 73 516 516 HOH HOH . E 3 HOH A 74 517 517 HOH HOH . E 3 HOH A 75 519 519 HOH HOH . E 3 HOH A 76 520 520 HOH HOH . E 3 HOH A 77 522 522 HOH HOH . E 3 HOH A 78 523 523 HOH HOH . E 3 HOH A 79 524 524 HOH HOH . E 3 HOH A 80 525 525 HOH HOH . E 3 HOH A 81 528 528 HOH HOH . E 3 HOH A 82 530 530 HOH HOH . E 3 HOH A 83 531 531 HOH HOH . E 3 HOH A 84 532 532 HOH HOH . E 3 HOH A 85 533 533 HOH HOH . E 3 HOH A 86 535 535 HOH HOH . E 3 HOH A 87 545 545 HOH HOH . E 3 HOH A 88 546 546 HOH HOH . E 3 HOH A 89 547 547 HOH HOH . E 3 HOH A 90 548 548 HOH HOH . E 3 HOH A 91 551 551 HOH HOH . E 3 HOH A 92 552 552 HOH HOH . F 3 HOH B 1 387 387 HOH HOH . F 3 HOH B 2 389 389 HOH HOH . F 3 HOH B 3 390 390 HOH HOH . F 3 HOH B 4 391 391 HOH HOH . F 3 HOH B 5 393 393 HOH HOH . F 3 HOH B 6 395 395 HOH HOH . F 3 HOH B 7 397 397 HOH HOH . F 3 HOH B 8 403 403 HOH HOH . F 3 HOH B 9 405 405 HOH HOH . F 3 HOH B 10 406 406 HOH HOH . F 3 HOH B 11 409 409 HOH HOH . F 3 HOH B 12 411 411 HOH HOH . F 3 HOH B 13 413 413 HOH HOH . F 3 HOH B 14 414 414 HOH HOH . F 3 HOH B 15 416 416 HOH HOH . F 3 HOH B 16 418 418 HOH HOH . F 3 HOH B 17 419 419 HOH HOH . F 3 HOH B 18 420 420 HOH HOH . F 3 HOH B 19 422 422 HOH HOH . F 3 HOH B 20 423 423 HOH HOH . F 3 HOH B 21 425 425 HOH HOH . F 3 HOH B 22 432 432 HOH HOH . F 3 HOH B 23 434 434 HOH HOH . F 3 HOH B 24 435 435 HOH HOH . F 3 HOH B 25 437 437 HOH HOH . F 3 HOH B 26 440 440 HOH HOH . F 3 HOH B 27 442 442 HOH HOH . F 3 HOH B 28 443 443 HOH HOH . F 3 HOH B 29 445 445 HOH HOH . F 3 HOH B 30 447 447 HOH HOH . F 3 HOH B 31 452 452 HOH HOH . F 3 HOH B 32 454 454 HOH HOH . F 3 HOH B 33 455 455 HOH HOH . F 3 HOH B 34 457 457 HOH HOH . F 3 HOH B 35 458 458 HOH HOH . F 3 HOH B 36 464 464 HOH HOH . F 3 HOH B 37 466 466 HOH HOH . F 3 HOH B 38 468 468 HOH HOH . F 3 HOH B 39 474 474 HOH HOH . F 3 HOH B 40 479 479 HOH HOH . F 3 HOH B 41 480 480 HOH HOH . F 3 HOH B 42 481 481 HOH HOH . F 3 HOH B 43 482 482 HOH HOH . F 3 HOH B 44 485 485 HOH HOH . F 3 HOH B 45 486 486 HOH HOH . F 3 HOH B 46 488 488 HOH HOH . F 3 HOH B 47 491 491 HOH HOH . F 3 HOH B 48 493 493 HOH HOH . F 3 HOH B 49 494 494 HOH HOH . F 3 HOH B 50 499 499 HOH HOH . F 3 HOH B 51 500 500 HOH HOH . F 3 HOH B 52 501 501 HOH HOH . F 3 HOH B 53 503 503 HOH HOH . F 3 HOH B 54 504 504 HOH HOH . F 3 HOH B 55 510 510 HOH HOH . F 3 HOH B 56 511 511 HOH HOH . F 3 HOH B 57 512 512 HOH HOH . F 3 HOH B 58 513 513 HOH HOH . F 3 HOH B 59 514 514 HOH HOH . F 3 HOH B 60 518 518 HOH HOH . F 3 HOH B 61 521 521 HOH HOH . F 3 HOH B 62 526 526 HOH HOH . F 3 HOH B 63 527 527 HOH HOH . F 3 HOH B 64 529 529 HOH HOH . F 3 HOH B 65 534 534 HOH HOH . F 3 HOH B 66 536 536 HOH HOH . F 3 HOH B 67 537 537 HOH HOH . F 3 HOH B 68 538 538 HOH HOH . F 3 HOH B 69 539 539 HOH HOH . F 3 HOH B 70 540 540 HOH HOH . F 3 HOH B 71 541 541 HOH HOH . F 3 HOH B 72 542 542 HOH HOH . F 3 HOH B 73 543 543 HOH HOH . F 3 HOH B 74 544 544 HOH HOH . F 3 HOH B 75 549 549 HOH HOH . F 3 HOH B 76 550 550 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 1.449 _atom_site.Cartn_y 37.324 _atom_site.Cartn_z 5.522 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 47.66 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 383 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 233 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #