data_3S3F # _model_server_result.job_id rc-Sp2OWVKbVu53jYnL9aQ _model_server_result.datetime_utc '2025-04-11 21:47:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3s3f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":309}' # _entry.id 3S3F # _exptl.entry_id 3S3F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 90.121 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,4-BUTANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3S3F _cell.length_a 103.07 _cell.length_b 103.07 _cell.length_c 173.401 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3S3F _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O2' _chem_comp.formula_weight 90.121 _chem_comp.id BU1 _chem_comp.mon_nstd_flag . _chem_comp.name 1,4-BUTANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BU1 sing 84 n n C1 O5 BU1 sing 85 n n C1 H11 BU1 sing 86 n n C1 H12 BU1 sing 87 n n C2 C3 BU1 sing 88 n n C2 H21 BU1 sing 89 n n C2 H22 BU1 sing 90 n n C3 C4 BU1 sing 91 n n C3 H31 BU1 sing 92 n n C3 H32 BU1 sing 93 n n C4 O6 BU1 sing 94 n n C4 H41 BU1 sing 95 n n C4 H42 BU1 sing 96 n n O5 HO5 BU1 sing 97 n n O6 HO6 BU1 sing 98 n n # _atom_sites.entry_id 3S3F _atom_sites.fract_transf_matrix[1][1] 0.009702 _atom_sites.fract_transf_matrix[1][2] 0.005602 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011203 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005767 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1BO A 1 308 1 1BO 1BO . D 3 IPA A 1 309 1 IPA IOH . E 3 IPA A 1 310 1 IPA IOH . F 4 VO4 B 1 308 1 VO4 VO4 . G 5 BU1 B 1 309 1 BU1 BU1 . H 2 1BO B 1 310 1 1BO 1BO . I 6 HOH A 1 311 1 HOH HOH . I 6 HOH A 2 312 3 HOH HOH . I 6 HOH A 3 313 11 HOH HOH . I 6 HOH A 4 314 12 HOH HOH . I 6 HOH A 5 315 14 HOH HOH . I 6 HOH A 6 316 15 HOH HOH . I 6 HOH A 7 317 16 HOH HOH . I 6 HOH A 8 318 20 HOH HOH . I 6 HOH A 9 319 21 HOH HOH . I 6 HOH A 10 320 22 HOH HOH . I 6 HOH A 11 321 23 HOH HOH . I 6 HOH A 12 322 26 HOH HOH . I 6 HOH A 13 323 29 HOH HOH . I 6 HOH A 14 324 30 HOH HOH . I 6 HOH A 15 325 32 HOH HOH . I 6 HOH A 16 326 35 HOH HOH . I 6 HOH A 17 327 37 HOH HOH . I 6 HOH A 18 328 41 HOH HOH . I 6 HOH A 19 329 45 HOH HOH . I 6 HOH A 20 330 46 HOH HOH . I 6 HOH A 21 331 49 HOH HOH . I 6 HOH A 22 332 57 HOH HOH . I 6 HOH A 23 333 58 HOH HOH . I 6 HOH A 24 334 62 HOH HOH . I 6 HOH A 25 335 63 HOH HOH . I 6 HOH A 26 336 65 HOH HOH . I 6 HOH A 27 337 66 HOH HOH . I 6 HOH A 28 338 67 HOH HOH . I 6 HOH A 29 339 79 HOH HOH . I 6 HOH A 30 340 80 HOH HOH . I 6 HOH A 31 341 81 HOH HOH . I 6 HOH A 32 342 83 HOH HOH . I 6 HOH A 33 343 92 HOH HOH . I 6 HOH A 34 344 104 HOH HOH . I 6 HOH A 35 345 105 HOH HOH . I 6 HOH A 36 346 114 HOH HOH . I 6 HOH A 37 347 117 HOH HOH . I 6 HOH A 38 348 119 HOH HOH . I 6 HOH A 39 349 122 HOH HOH . I 6 HOH A 40 350 192 HOH HOH . I 6 HOH A 41 351 7 HOH HOH . I 6 HOH A 42 352 8 HOH HOH . I 6 HOH A 43 357 16 HOH HOH . J 6 HOH B 1 311 2 HOH HOH . J 6 HOH B 2 312 5 HOH HOH . J 6 HOH B 3 313 6 HOH HOH . J 6 HOH B 4 314 8 HOH HOH . J 6 HOH B 5 315 9 HOH HOH . J 6 HOH B 6 316 10 HOH HOH . J 6 HOH B 7 317 13 HOH HOH . J 6 HOH B 8 318 17 HOH HOH . J 6 HOH B 9 319 19 HOH HOH . J 6 HOH B 10 320 33 HOH HOH . J 6 HOH B 11 321 34 HOH HOH . J 6 HOH B 12 322 38 HOH HOH . J 6 HOH B 13 323 39 HOH HOH . J 6 HOH B 14 324 40 HOH HOH . J 6 HOH B 15 325 42 HOH HOH . J 6 HOH B 16 326 47 HOH HOH . J 6 HOH B 17 327 50 HOH HOH . J 6 HOH B 18 328 51 HOH HOH . J 6 HOH B 19 329 52 HOH HOH . J 6 HOH B 20 330 54 HOH HOH . J 6 HOH B 21 331 55 HOH HOH . J 6 HOH B 22 332 59 HOH HOH . J 6 HOH B 23 333 64 HOH HOH . J 6 HOH B 24 334 73 HOH HOH . J 6 HOH B 25 335 74 HOH HOH . J 6 HOH B 26 336 82 HOH HOH . J 6 HOH B 27 337 85 HOH HOH . J 6 HOH B 28 338 100 HOH HOH . J 6 HOH B 29 339 103 HOH HOH . J 6 HOH B 30 340 108 HOH HOH . J 6 HOH B 31 341 111 HOH HOH . J 6 HOH B 32 342 113 HOH HOH . J 6 HOH B 33 343 118 HOH HOH . J 6 HOH B 34 344 123 HOH HOH . J 6 HOH B 35 345 131 HOH HOH . J 6 HOH B 36 346 145 HOH HOH . J 6 HOH B 37 347 190 HOH HOH . J 6 HOH B 38 348 191 HOH HOH . J 6 HOH B 39 349 3 HOH HOH . J 6 HOH B 40 350 4 HOH HOH . J 6 HOH B 41 351 5 HOH HOH . J 6 HOH B 42 352 9 HOH HOH . J 6 HOH B 43 353 10 HOH HOH . J 6 HOH B 44 354 11 HOH HOH . J 6 HOH B 45 355 14 HOH HOH . J 6 HOH B 46 356 15 HOH HOH . J 6 HOH B 47 358 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BU1 . . . G 5 7.938 37.282 -1.957 1 40.64 ? C1 BU1 309 B 1 HETATM 2 C C2 BU1 . . . G 5 7.201 37.05 -3.292 1 39.75 ? C2 BU1 309 B 1 HETATM 3 C C3 BU1 . . . G 5 6.148 35.922 -3.184 1 39.62 ? C3 BU1 309 B 1 HETATM 4 C C4 BU1 . . . G 5 6.72 34.591 -2.668 1 39.51 ? C4 BU1 309 B 1 HETATM 5 O O5 BU1 . . . G 5 8.4 38.634 -1.811 1 40.35 ? O5 BU1 309 B 1 HETATM 6 O O6 BU1 . . . G 5 5.715 33.568 -2.703 1 38.42 ? O6 BU1 309 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #