data_3S41
#
_model_server_result.job_id            ewD-k5p78WyarS_uiii4Kw 
_model_server_result.datetime_utc      '2024-11-23 07:26:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3s41 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":600}' 
#
_entry.id    3S41 
#
_exptl.entry_id    3S41 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3S41 
_cell.length_a            67.01 
_cell.length_b            82.2 
_cell.length_c            86.16 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3S41 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O MET 242 A MET 238 1_555 C NA NA . A NA 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? 
metalc ? metalc2 A O VAL 245 A VAL 241 1_555 C NA NA . A NA 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? 
metalc ? metalc3 A O VAL 248 A VAL 244 1_555 C NA NA . A NA 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? 
metalc ? metalc4 A O GLY 250 A GLY 246 1_555 C NA NA . A NA 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3S41 
_atom_sites.fract_transf_matrix[1][1]    0.014923 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012165 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011606 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GLC A 1 500 500 GLC GLC . 
C 3 NA A 1 600 600 NA NA . 
D 4 S41 A 1 4000 4000 S41 PFE . 
E 5 HOH A 1 466 1 HOH HOH . 
E 5 HOH A 2 467 2 HOH HOH . 
E 5 HOH A 3 468 3 HOH HOH . 
E 5 HOH A 4 469 4 HOH HOH . 
E 5 HOH A 5 470 5 HOH HOH . 
E 5 HOH A 6 471 6 HOH HOH . 
E 5 HOH A 7 472 7 HOH HOH . 
E 5 HOH A 8 473 8 HOH HOH . 
E 5 HOH A 9 474 9 HOH HOH . 
E 5 HOH A 10 475 10 HOH HOH . 
E 5 HOH A 11 476 11 HOH HOH . 
E 5 HOH A 12 477 13 HOH HOH . 
E 5 HOH A 13 478 14 HOH HOH . 
E 5 HOH A 14 479 15 HOH HOH . 
E 5 HOH A 15 480 16 HOH HOH . 
E 5 HOH A 16 481 17 HOH HOH . 
E 5 HOH A 17 482 18 HOH HOH . 
E 5 HOH A 18 483 19 HOH HOH . 
E 5 HOH A 19 484 20 HOH HOH . 
E 5 HOH A 20 485 21 HOH HOH . 
E 5 HOH A 21 486 22 HOH HOH . 
E 5 HOH A 22 487 23 HOH HOH . 
E 5 HOH A 23 488 24 HOH HOH . 
E 5 HOH A 24 489 25 HOH HOH . 
E 5 HOH A 25 490 26 HOH HOH . 
E 5 HOH A 26 491 27 HOH HOH . 
E 5 HOH A 27 492 28 HOH HOH . 
E 5 HOH A 28 493 29 HOH HOH . 
E 5 HOH A 29 494 30 HOH HOH . 
E 5 HOH A 30 495 31 HOH HOH . 
E 5 HOH A 31 496 32 HOH HOH . 
E 5 HOH A 32 497 33 HOH HOH . 
E 5 HOH A 33 498 34 HOH HOH . 
E 5 HOH A 34 499 35 HOH HOH . 
E 5 HOH A 35 501 36 HOH HOH . 
E 5 HOH A 36 502 37 HOH HOH . 
E 5 HOH A 37 503 38 HOH HOH . 
E 5 HOH A 38 504 39 HOH HOH . 
E 5 HOH A 39 505 40 HOH HOH . 
E 5 HOH A 40 506 41 HOH HOH . 
E 5 HOH A 41 507 42 HOH HOH . 
E 5 HOH A 42 508 43 HOH HOH . 
E 5 HOH A 43 509 44 HOH HOH . 
E 5 HOH A 44 510 45 HOH HOH . 
E 5 HOH A 45 511 46 HOH HOH . 
E 5 HOH A 46 512 47 HOH HOH . 
E 5 HOH A 47 513 48 HOH HOH . 
E 5 HOH A 48 514 49 HOH HOH . 
E 5 HOH A 49 515 50 HOH HOH . 
E 5 HOH A 50 516 51 HOH HOH . 
E 5 HOH A 51 517 52 HOH HOH . 
E 5 HOH A 52 518 53 HOH HOH . 
E 5 HOH A 53 519 54 HOH HOH . 
E 5 HOH A 54 520 55 HOH HOH . 
E 5 HOH A 55 521 56 HOH HOH . 
E 5 HOH A 56 522 57 HOH HOH . 
E 5 HOH A 57 523 58 HOH HOH . 
E 5 HOH A 58 524 59 HOH HOH . 
E 5 HOH A 59 525 60 HOH HOH . 
E 5 HOH A 60 526 61 HOH HOH . 
E 5 HOH A 61 527 62 HOH HOH . 
E 5 HOH A 62 528 63 HOH HOH . 
E 5 HOH A 63 529 64 HOH HOH . 
E 5 HOH A 64 530 65 HOH HOH . 
E 5 HOH A 65 531 66 HOH HOH . 
E 5 HOH A 66 532 67 HOH HOH . 
E 5 HOH A 67 533 68 HOH HOH . 
E 5 HOH A 68 534 69 HOH HOH . 
E 5 HOH A 69 535 70 HOH HOH . 
E 5 HOH A 70 536 71 HOH HOH . 
E 5 HOH A 71 537 72 HOH HOH . 
E 5 HOH A 72 538 73 HOH HOH . 
E 5 HOH A 73 539 74 HOH HOH . 
E 5 HOH A 74 540 75 HOH HOH . 
E 5 HOH A 75 541 76 HOH HOH . 
E 5 HOH A 76 542 77 HOH HOH . 
E 5 HOH A 77 543 78 HOH HOH . 
E 5 HOH A 78 544 79 HOH HOH . 
E 5 HOH A 79 545 80 HOH HOH . 
E 5 HOH A 80 546 81 HOH HOH . 
E 5 HOH A 81 547 82 HOH HOH . 
E 5 HOH A 82 548 83 HOH HOH . 
E 5 HOH A 83 549 84 HOH HOH . 
E 5 HOH A 84 550 85 HOH HOH . 
E 5 HOH A 85 551 86 HOH HOH . 
E 5 HOH A 86 552 87 HOH HOH . 
E 5 HOH A 87 553 88 HOH HOH . 
E 5 HOH A 88 554 90 HOH HOH . 
E 5 HOH A 89 555 91 HOH HOH . 
E 5 HOH A 90 556 92 HOH HOH . 
E 5 HOH A 91 557 93 HOH HOH . 
E 5 HOH A 92 558 94 HOH HOH . 
E 5 HOH A 93 559 95 HOH HOH . 
E 5 HOH A 94 560 96 HOH HOH . 
E 5 HOH A 95 561 97 HOH HOH . 
E 5 HOH A 96 562 98 HOH HOH . 
E 5 HOH A 97 563 99 HOH HOH . 
E 5 HOH A 98 564 100 HOH HOH . 
E 5 HOH A 99 565 101 HOH HOH . 
E 5 HOH A 100 566 102 HOH HOH . 
E 5 HOH A 101 567 103 HOH HOH . 
E 5 HOH A 102 568 104 HOH HOH . 
E 5 HOH A 103 569 105 HOH HOH . 
E 5 HOH A 104 570 106 HOH HOH . 
E 5 HOH A 105 571 107 HOH HOH . 
E 5 HOH A 106 572 108 HOH HOH . 
E 5 HOH A 107 573 109 HOH HOH . 
E 5 HOH A 108 574 110 HOH HOH . 
E 5 HOH A 109 575 111 HOH HOH . 
E 5 HOH A 110 576 112 HOH HOH . 
E 5 HOH A 111 577 113 HOH HOH . 
E 5 HOH A 112 578 114 HOH HOH . 
E 5 HOH A 113 579 115 HOH HOH . 
E 5 HOH A 114 580 116 HOH HOH . 
E 5 HOH A 115 581 117 HOH HOH . 
E 5 HOH A 116 582 118 HOH HOH . 
E 5 HOH A 117 583 119 HOH HOH . 
E 5 HOH A 118 584 120 HOH HOH . 
E 5 HOH A 119 585 121 HOH HOH . 
E 5 HOH A 120 586 122 HOH HOH . 
E 5 HOH A 121 587 123 HOH HOH . 
E 5 HOH A 122 588 124 HOH HOH . 
E 5 HOH A 123 589 125 HOH HOH . 
E 5 HOH A 124 590 126 HOH HOH . 
E 5 HOH A 125 591 127 HOH HOH . 
E 5 HOH A 126 592 128 HOH HOH . 
E 5 HOH A 127 593 129 HOH HOH . 
E 5 HOH A 128 594 130 HOH HOH . 
E 5 HOH A 129 595 131 HOH HOH . 
E 5 HOH A 130 596 132 HOH HOH . 
E 5 HOH A 131 597 133 HOH HOH . 
E 5 HOH A 132 598 134 HOH HOH . 
E 5 HOH A 133 599 135 HOH HOH . 
E 5 HOH A 134 601 136 HOH HOH . 
E 5 HOH A 135 602 137 HOH HOH . 
E 5 HOH A 136 603 138 HOH HOH . 
E 5 HOH A 137 604 139 HOH HOH . 
E 5 HOH A 138 605 140 HOH HOH . 
E 5 HOH A 139 606 141 HOH HOH . 
E 5 HOH A 140 607 142 HOH HOH . 
E 5 HOH A 141 608 143 HOH HOH . 
E 5 HOH A 142 609 144 HOH HOH . 
E 5 HOH A 143 610 145 HOH HOH . 
E 5 HOH A 144 611 146 HOH HOH . 
E 5 HOH A 145 612 147 HOH HOH . 
E 5 HOH A 146 613 148 HOH HOH . 
E 5 HOH A 147 614 149 HOH HOH . 
E 5 HOH A 148 615 150 HOH HOH . 
E 5 HOH A 149 616 151 HOH HOH . 
E 5 HOH A 150 617 152 HOH HOH . 
E 5 HOH A 151 618 153 HOH HOH . 
E 5 HOH A 152 619 154 HOH HOH . 
E 5 HOH A 153 620 155 HOH HOH . 
E 5 HOH A 154 621 156 HOH HOH . 
E 5 HOH A 155 622 157 HOH HOH . 
E 5 HOH A 156 623 158 HOH HOH . 
E 5 HOH A 157 624 159 HOH HOH . 
E 5 HOH A 158 625 160 HOH HOH . 
E 5 HOH A 159 626 161 HOH HOH . 
E 5 HOH A 160 627 162 HOH HOH . 
E 5 HOH A 161 628 163 HOH HOH . 
E 5 HOH A 162 629 164 HOH HOH . 
E 5 HOH A 163 630 165 HOH HOH . 
E 5 HOH A 164 631 166 HOH HOH . 
E 5 HOH A 165 632 167 HOH HOH . 
E 5 HOH A 166 633 168 HOH HOH . 
E 5 HOH A 167 634 169 HOH HOH . 
E 5 HOH A 168 635 170 HOH HOH . 
E 5 HOH A 169 636 171 HOH HOH . 
E 5 HOH A 170 637 172 HOH HOH . 
E 5 HOH A 171 638 173 HOH HOH . 
E 5 HOH A 172 639 174 HOH HOH . 
E 5 HOH A 173 640 175 HOH HOH . 
E 5 HOH A 174 641 176 HOH HOH . 
E 5 HOH A 175 642 177 HOH HOH . 
E 5 HOH A 176 643 178 HOH HOH . 
E 5 HOH A 177 644 179 HOH HOH . 
E 5 HOH A 178 645 180 HOH HOH . 
E 5 HOH A 179 646 181 HOH HOH . 
E 5 HOH A 180 647 182 HOH HOH . 
E 5 HOH A 181 648 183 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -18.532 
_atom_site.Cartn_y               -1.847 
_atom_site.Cartn_z               34.795 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        17.73 
_atom_site.pdbx_formal_charge    1 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           600 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           1 
#