data_3S4J # _model_server_result.job_id EKNr1x3e3XAos_Pm7MoJCQ _model_server_result.datetime_utc '2025-01-10 08:15:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3s4j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":909}' # _entry.id 3S4J # _exptl.entry_id 3S4J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3S4J _cell.length_a 111.198 _cell.length_b 111.198 _cell.length_c 69.598 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3S4J _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 99 A ASP 103 1_555 C MG MG . A MG 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc2 A OD1 ASP 99 A ASP 103 1_555 E MG MG . A MG 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc3 A OD2 ASP 103 A ASP 107 1_555 C MG MG . A MG 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc4 A OD2 ASP 103 A ASP 107 1_555 E MG MG . A MG 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc5 A OD2 ASP 239 A ASP 243 1_555 D MG MG . A MG 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc6 G O HOH . A HOH 372 1_555 E MG MG . A MG 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? metalc ? metalc7 G O HOH . A HOH 381 1_555 C MG MG . A MG 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc8 G O HOH . A HOH 510 1_555 D MG MG . A MG 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc9 G O HOH . A HOH 512 1_555 E MG MG . A MG 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc10 G O HOH . A HOH 513 1_555 C MG MG . A MG 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc11 G O HOH . A HOH 514 1_555 D MG MG . A MG 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc12 G O HOH . A HOH 517 1_555 D MG MG . A MG 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc13 G O HOH . A HOH 518 1_555 E MG MG . A MG 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc14 B O22 UNV . A UNV 901 1_555 C MG MG . A MG 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc15 B O18 UNV . A UNV 901 1_555 C MG MG . A MG 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc16 B O20 UNV . A UNV 901 1_555 D MG MG . A MG 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? metalc ? metalc17 B O23 UNV . A UNV 901 1_555 D MG MG . A MG 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc18 B O22 UNV . A UNV 901 1_555 E MG MG . A MG 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3S4J _atom_sites.fract_transf_matrix[1][1] 0.008993 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008993 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014368 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UNV A 1 901 901 UNV UNV . C 3 MG A 1 907 907 MG MG . D 3 MG A 1 908 908 MG MG . E 3 MG A 1 909 909 MG MG . F 4 SO4 A 1 1001 1001 SO4 SO4 . G 5 HOH A 1 2 2 HOH HOH . G 5 HOH A 2 3 3 HOH HOH . G 5 HOH A 3 4 4 HOH HOH . G 5 HOH A 4 354 5 HOH HOH . G 5 HOH A 5 355 6 HOH HOH . G 5 HOH A 6 356 7 HOH HOH . G 5 HOH A 7 357 8 HOH HOH . G 5 HOH A 8 358 9 HOH HOH . G 5 HOH A 9 359 10 HOH HOH . G 5 HOH A 10 360 11 HOH HOH . G 5 HOH A 11 361 12 HOH HOH . G 5 HOH A 12 362 13 HOH HOH . G 5 HOH A 13 363 14 HOH HOH . G 5 HOH A 14 364 15 HOH HOH . G 5 HOH A 15 365 16 HOH HOH . G 5 HOH A 16 366 17 HOH HOH . G 5 HOH A 17 367 18 HOH HOH . G 5 HOH A 18 368 19 HOH HOH . G 5 HOH A 19 369 20 HOH HOH . G 5 HOH A 20 370 21 HOH HOH . G 5 HOH A 21 371 22 HOH HOH . G 5 HOH A 22 372 23 HOH HOH . G 5 HOH A 23 373 24 HOH HOH . G 5 HOH A 24 374 25 HOH HOH . G 5 HOH A 25 375 26 HOH HOH . G 5 HOH A 26 376 27 HOH HOH . G 5 HOH A 27 377 28 HOH HOH . G 5 HOH A 28 378 29 HOH HOH . G 5 HOH A 29 379 30 HOH HOH . G 5 HOH A 30 380 31 HOH HOH . G 5 HOH A 31 381 33 HOH HOH . G 5 HOH A 32 382 34 HOH HOH . G 5 HOH A 33 383 38 HOH HOH . G 5 HOH A 34 384 39 HOH HOH . G 5 HOH A 35 385 40 HOH HOH . G 5 HOH A 36 386 41 HOH HOH . G 5 HOH A 37 387 43 HOH HOH . G 5 HOH A 38 388 44 HOH HOH . G 5 HOH A 39 389 45 HOH HOH . G 5 HOH A 40 390 46 HOH HOH . G 5 HOH A 41 391 47 HOH HOH . G 5 HOH A 42 392 48 HOH HOH . G 5 HOH A 43 393 49 HOH HOH . G 5 HOH A 44 394 50 HOH HOH . G 5 HOH A 45 395 52 HOH HOH . G 5 HOH A 46 396 55 HOH HOH . G 5 HOH A 47 397 56 HOH HOH . G 5 HOH A 48 398 57 HOH HOH . G 5 HOH A 49 399 59 HOH HOH . G 5 HOH A 50 400 60 HOH HOH . G 5 HOH A 51 401 61 HOH HOH . G 5 HOH A 52 402 62 HOH HOH . G 5 HOH A 53 403 63 HOH HOH . G 5 HOH A 54 404 64 HOH HOH . G 5 HOH A 55 405 65 HOH HOH . G 5 HOH A 56 406 66 HOH HOH . G 5 HOH A 57 407 68 HOH HOH . G 5 HOH A 58 408 69 HOH HOH . G 5 HOH A 59 409 70 HOH HOH . G 5 HOH A 60 410 72 HOH HOH . G 5 HOH A 61 411 73 HOH HOH . G 5 HOH A 62 412 74 HOH HOH . G 5 HOH A 63 413 75 HOH HOH . G 5 HOH A 64 414 76 HOH HOH . G 5 HOH A 65 415 78 HOH HOH . G 5 HOH A 66 416 79 HOH HOH . G 5 HOH A 67 417 80 HOH HOH . G 5 HOH A 68 418 81 HOH HOH . G 5 HOH A 69 419 82 HOH HOH . G 5 HOH A 70 420 83 HOH HOH . G 5 HOH A 71 421 84 HOH HOH . G 5 HOH A 72 422 85 HOH HOH . G 5 HOH A 73 423 88 HOH HOH . G 5 HOH A 74 424 89 HOH HOH . G 5 HOH A 75 425 90 HOH HOH . G 5 HOH A 76 426 91 HOH HOH . G 5 HOH A 77 427 92 HOH HOH . G 5 HOH A 78 428 93 HOH HOH . G 5 HOH A 79 429 95 HOH HOH . G 5 HOH A 80 430 96 HOH HOH . G 5 HOH A 81 431 97 HOH HOH . G 5 HOH A 82 432 98 HOH HOH . G 5 HOH A 83 433 99 HOH HOH . G 5 HOH A 84 434 100 HOH HOH . G 5 HOH A 85 435 103 HOH HOH . G 5 HOH A 86 436 104 HOH HOH . G 5 HOH A 87 437 107 HOH HOH . G 5 HOH A 88 438 108 HOH HOH . G 5 HOH A 89 439 109 HOH HOH . G 5 HOH A 90 440 111 HOH HOH . G 5 HOH A 91 441 112 HOH HOH . G 5 HOH A 92 442 113 HOH HOH . G 5 HOH A 93 443 114 HOH HOH . G 5 HOH A 94 444 115 HOH HOH . G 5 HOH A 95 445 116 HOH HOH . G 5 HOH A 96 446 117 HOH HOH . G 5 HOH A 97 447 118 HOH HOH . G 5 HOH A 98 448 119 HOH HOH . G 5 HOH A 99 449 120 HOH HOH . G 5 HOH A 100 450 121 HOH HOH . G 5 HOH A 101 451 122 HOH HOH . G 5 HOH A 102 452 123 HOH HOH . G 5 HOH A 103 453 124 HOH HOH . G 5 HOH A 104 454 125 HOH HOH . G 5 HOH A 105 455 126 HOH HOH . G 5 HOH A 106 456 127 HOH HOH . G 5 HOH A 107 457 128 HOH HOH . G 5 HOH A 108 458 129 HOH HOH . G 5 HOH A 109 459 131 HOH HOH . G 5 HOH A 110 460 132 HOH HOH . G 5 HOH A 111 461 133 HOH HOH . G 5 HOH A 112 462 134 HOH HOH . G 5 HOH A 113 463 135 HOH HOH . G 5 HOH A 114 464 136 HOH HOH . G 5 HOH A 115 465 137 HOH HOH . G 5 HOH A 116 466 138 HOH HOH . G 5 HOH A 117 467 139 HOH HOH . G 5 HOH A 118 468 140 HOH HOH . G 5 HOH A 119 469 143 HOH HOH . G 5 HOH A 120 470 144 HOH HOH . G 5 HOH A 121 471 145 HOH HOH . G 5 HOH A 122 472 147 HOH HOH . G 5 HOH A 123 473 150 HOH HOH . G 5 HOH A 124 474 151 HOH HOH . G 5 HOH A 125 475 153 HOH HOH . G 5 HOH A 126 476 154 HOH HOH . G 5 HOH A 127 477 156 HOH HOH . G 5 HOH A 128 478 157 HOH HOH . G 5 HOH A 129 479 158 HOH HOH . G 5 HOH A 130 480 159 HOH HOH . G 5 HOH A 131 481 160 HOH HOH . G 5 HOH A 132 482 161 HOH HOH . G 5 HOH A 133 483 162 HOH HOH . G 5 HOH A 134 484 163 HOH HOH . G 5 HOH A 135 485 164 HOH HOH . G 5 HOH A 136 486 165 HOH HOH . G 5 HOH A 137 487 166 HOH HOH . G 5 HOH A 138 488 167 HOH HOH . G 5 HOH A 139 489 169 HOH HOH . G 5 HOH A 140 490 171 HOH HOH . G 5 HOH A 141 491 172 HOH HOH . G 5 HOH A 142 492 173 HOH HOH . G 5 HOH A 143 493 174 HOH HOH . G 5 HOH A 144 494 175 HOH HOH . G 5 HOH A 145 495 176 HOH HOH . G 5 HOH A 146 496 177 HOH HOH . G 5 HOH A 147 497 178 HOH HOH . G 5 HOH A 148 498 179 HOH HOH . G 5 HOH A 149 499 180 HOH HOH . G 5 HOH A 150 500 181 HOH HOH . G 5 HOH A 151 501 182 HOH HOH . G 5 HOH A 152 502 183 HOH HOH . G 5 HOH A 153 503 184 HOH HOH . G 5 HOH A 154 504 185 HOH HOH . G 5 HOH A 155 505 186 HOH HOH . G 5 HOH A 156 506 187 HOH HOH . G 5 HOH A 157 507 188 HOH HOH . G 5 HOH A 158 508 189 HOH HOH . G 5 HOH A 159 509 190 HOH HOH . G 5 HOH A 160 510 191 HOH HOH . G 5 HOH A 161 511 192 HOH HOH . G 5 HOH A 162 512 194 HOH HOH . G 5 HOH A 163 513 195 HOH HOH . G 5 HOH A 164 514 196 HOH HOH . G 5 HOH A 165 515 197 HOH HOH . G 5 HOH A 166 516 198 HOH HOH . G 5 HOH A 167 517 199 HOH HOH . G 5 HOH A 168 518 200 HOH HOH . G 5 HOH A 169 519 201 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 19.666 _atom_site.Cartn_y 32.642 _atom_site.Cartn_z -9.346 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.81 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 909 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #