data_3S4O
#
_model_server_result.job_id            7jtnwzaREa9-7U-8R17OjA 
_model_server_result.datetime_utc      '2024-10-19 05:28:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3s4o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":164}' 
#
_entry.id    3S4O 
#
_exptl.entry_id    3S4O 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3S4O 
_cell.length_a            42.518 
_cell.length_b            69.42 
_cell.length_c            118.931 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3S4O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E 1 1 
B,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 55 A CYS 51 1_555 A SG CYS 116 A CYS 112 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf2 B SG CYS 55 B CYS 51 1_555 B SG CYS 116 B CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
covale ? covale1 A C MSE 5 A MSE 1 1_555 A N ASN 6 A ASN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 A C GLN 158 A GLN 154 1_555 A N MSE 159 A MSE 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 A C MSE 159 A MSE 155 1_555 A N HIS 160 A HIS 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale4 B C MSE 5 B MSE 1 1_555 B N ASN 6 B ASN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale5 B C GLN 158 B GLN 154 1_555 B N MSE 159 B MSE 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale6 B C MSE 159 B MSE 155 1_555 B N HIS 160 B HIS 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
#
_chem_comp.formula           'C8 H18 N2 O4 S' 
_chem_comp.formula_weight    238.305 
_chem_comp.id                EPE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEPES 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 EPE sing 83 n n 
N1 C6 EPE sing 84 n n 
N1 C9 EPE sing 85 n n 
C2 C3 EPE sing 86 n n 
C2 H21 EPE sing 87 n n 
C2 H22 EPE sing 88 n n 
C3 N4 EPE sing 89 n n 
C3 H31 EPE sing 90 n n 
C3 H32 EPE sing 91 n n 
N4 C5 EPE sing 92 n n 
N4 C7 EPE sing 93 n n 
C5 C6 EPE sing 94 n n 
C5 H51 EPE sing 95 n n 
C5 H52 EPE sing 96 n n 
C6 H61 EPE sing 97 n n 
C6 H62 EPE sing 98 n n 
C7 C8 EPE sing 99 n n 
C7 H71 EPE sing 100 n n 
C7 H72 EPE sing 101 n n 
C8 O8 EPE sing 102 n n 
C8 H81 EPE sing 103 n n 
C8 H82 EPE sing 104 n n 
O8 HO8 EPE sing 105 n n 
C9 C10 EPE sing 106 n n 
C9 H91 EPE sing 107 n n 
C9 H92 EPE sing 108 n n 
C10 S EPE sing 109 n n 
C10 H101 EPE sing 110 n n 
C10 H102 EPE sing 111 n n 
S O1S EPE doub 112 n n 
S O2S EPE doub 113 n n 
S O3S EPE sing 114 n n 
O3S HOS3 EPE sing 115 n n 
#
_atom_sites.entry_id                     3S4O 
_atom_sites.fract_transf_matrix[1][1]    0.023519 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014405 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008408 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 THJ A 1 170 170 THJ THJ . 
D 3 EPE A 1 164 1 EPE EPE . 
E 4 HOH A 1 165 1 HOH HOH . 
E 4 HOH A 2 166 4 HOH HOH . 
E 4 HOH A 3 167 6 HOH HOH . 
E 4 HOH A 4 168 7 HOH HOH . 
E 4 HOH A 5 169 8 HOH HOH . 
E 4 HOH A 6 171 9 HOH HOH . 
E 4 HOH A 7 172 12 HOH HOH . 
E 4 HOH A 8 173 13 HOH HOH . 
E 4 HOH A 9 174 14 HOH HOH . 
E 4 HOH A 10 175 15 HOH HOH . 
E 4 HOH A 11 176 16 HOH HOH . 
E 4 HOH A 12 177 18 HOH HOH . 
E 4 HOH A 13 178 23 HOH HOH . 
E 4 HOH A 14 179 25 HOH HOH . 
E 4 HOH A 15 180 28 HOH HOH . 
E 4 HOH A 16 181 29 HOH HOH . 
E 4 HOH A 17 182 31 HOH HOH . 
E 4 HOH A 18 183 32 HOH HOH . 
E 4 HOH A 19 184 34 HOH HOH . 
E 4 HOH A 20 185 38 HOH HOH . 
E 4 HOH A 21 186 40 HOH HOH . 
E 4 HOH A 22 187 41 HOH HOH . 
E 4 HOH A 23 188 48 HOH HOH . 
E 4 HOH A 24 189 51 HOH HOH . 
E 4 HOH A 25 190 58 HOH HOH . 
E 4 HOH A 26 191 59 HOH HOH . 
E 4 HOH A 27 192 60 HOH HOH . 
E 4 HOH A 28 193 61 HOH HOH . 
E 4 HOH A 29 194 64 HOH HOH . 
E 4 HOH A 30 195 66 HOH HOH . 
E 4 HOH A 31 196 71 HOH HOH . 
E 4 HOH A 32 197 74 HOH HOH . 
E 4 HOH A 33 198 75 HOH HOH . 
E 4 HOH A 34 199 77 HOH HOH . 
E 4 HOH A 35 200 78 HOH HOH . 
E 4 HOH A 36 201 79 HOH HOH . 
E 4 HOH A 37 202 80 HOH HOH . 
E 4 HOH A 38 203 81 HOH HOH . 
E 4 HOH A 39 204 82 HOH HOH . 
E 4 HOH A 40 205 85 HOH HOH . 
E 4 HOH A 41 206 86 HOH HOH . 
E 4 HOH A 42 207 88 HOH HOH . 
E 4 HOH A 43 208 89 HOH HOH . 
E 4 HOH A 44 209 93 HOH HOH . 
E 4 HOH A 45 210 95 HOH HOH . 
E 4 HOH A 46 211 97 HOH HOH . 
E 4 HOH A 47 212 99 HOH HOH . 
E 4 HOH A 48 213 49 HOH HOH . 
F 4 HOH B 1 164 2 HOH HOH . 
F 4 HOH B 2 165 3 HOH HOH . 
F 4 HOH B 3 166 5 HOH HOH . 
F 4 HOH B 4 167 10 HOH HOH . 
F 4 HOH B 5 168 11 HOH HOH . 
F 4 HOH B 6 169 17 HOH HOH . 
F 4 HOH B 7 170 19 HOH HOH . 
F 4 HOH B 8 171 20 HOH HOH . 
F 4 HOH B 9 172 21 HOH HOH . 
F 4 HOH B 10 173 22 HOH HOH . 
F 4 HOH B 11 174 24 HOH HOH . 
F 4 HOH B 12 175 26 HOH HOH . 
F 4 HOH B 13 176 30 HOH HOH . 
F 4 HOH B 14 177 33 HOH HOH . 
F 4 HOH B 15 178 36 HOH HOH . 
F 4 HOH B 16 179 37 HOH HOH . 
F 4 HOH B 17 180 39 HOH HOH . 
F 4 HOH B 18 181 42 HOH HOH . 
F 4 HOH B 19 182 44 HOH HOH . 
F 4 HOH B 20 183 45 HOH HOH . 
F 4 HOH B 21 184 46 HOH HOH . 
F 4 HOH B 22 186 54 HOH HOH . 
F 4 HOH B 23 187 55 HOH HOH . 
F 4 HOH B 24 188 57 HOH HOH . 
F 4 HOH B 25 189 62 HOH HOH . 
F 4 HOH B 26 190 63 HOH HOH . 
F 4 HOH B 27 191 67 HOH HOH . 
F 4 HOH B 28 192 68 HOH HOH . 
F 4 HOH B 29 193 69 HOH HOH . 
F 4 HOH B 30 194 70 HOH HOH . 
F 4 HOH B 31 195 73 HOH HOH . 
F 4 HOH B 32 196 76 HOH HOH . 
F 4 HOH B 33 197 83 HOH HOH . 
F 4 HOH B 34 198 84 HOH HOH . 
F 4 HOH B 35 199 87 HOH HOH . 
F 4 HOH B 36 200 90 HOH HOH . 
F 4 HOH B 37 201 91 HOH HOH . 
F 4 HOH B 38 202 92 HOH HOH . 
F 4 HOH B 39 203 94 HOH HOH . 
F 4 HOH B 40 204 98 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 EPE . . . D 3 15.428 -8.36 -26.158 0.33 34.94 ? N1 EPE 164 A 1 
HETATM 2 C C2 EPE . . . D 3 15.486 -7.716 -24.837 0.33 34.66 ? C2 EPE 164 A 1 
HETATM 3 C C3 EPE . . . D 3 14.315 -6.748 -24.73 0.33 34.48 ? C3 EPE 164 A 1 
HETATM 4 N N4 EPE . . . D 3 13.313 -7.054 -25.735 0.33 34.81 ? N4 EPE 164 A 1 
HETATM 5 C C5 EPE . . . D 3 13.817 -6.81 -27.074 0.33 34.3 ? C5 EPE 164 A 1 
HETATM 6 C C6 EPE . . . D 3 15.228 -7.366 -27.215 0.33 33.37 ? C6 EPE 164 A 1 
HETATM 7 C C7 EPE . . . D 3 12.095 -6.329 -25.442 0.33 34.2 ? C7 EPE 164 A 1 
HETATM 8 C C8 EPE . . . D 3 10.893 -6.986 -26.103 0.33 34.3 ? C8 EPE 164 A 1 
HETATM 9 O O8 EPE . . . D 3 9.686 -6.342 -25.752 0.33 33.82 ? O8 EPE 164 A 1 
HETATM 10 C C9 EPE . . . D 3 16.638 -9.14 -26.422 0.33 35.96 ? C9 EPE 164 A 1 
HETATM 11 C C10 EPE . . . D 3 16.559 -10.463 -25.682 0.33 34.44 ? C10 EPE 164 A 1 
HETATM 12 S S EPE . . . D 3 17.737 -11.649 -26.367 0.33 36.48 ? S EPE 164 A 1 
HETATM 13 O O1S EPE . . . D 3 18.807 -11.999 -25.454 0.33 34.69 ? O1S EPE 164 A 1 
HETATM 14 O O2S EPE . . . D 3 18.327 -11.078 -27.586 0.33 35.73 ? O2S EPE 164 A 1 
HETATM 15 O O3S EPE . . . D 3 16.993 -12.868 -26.622 0.33 32.51 ? O3S EPE 164 A 1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           337 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           15 
#