data_3S53 # _model_server_result.job_id WGCkNEFhFo78epwsBNtRIA _model_server_result.datetime_utc '2024-11-14 17:00:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3s53 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":203}' # _entry.id 3S53 # _exptl.entry_id 3S53 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 547.664 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3S53 _cell.length_a 28.931 _cell.length_b 66.09 _cell.length_c 92.833 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3S53 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 K N N # _chem_comp.formula 'C27 H37 N3 O7 S' _chem_comp.formula_weight 547.664 _chem_comp.id 017 _chem_comp.mon_nstd_flag . _chem_comp.name (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Darunavir;TMC114;UIC-94017 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 017 sing 1 n n N1 H11 017 sing 2 n n N1 H12 017 sing 3 n n C2 C3 017 doub 4 n y C2 C7 017 sing 5 n y C3 C4 017 sing 6 n y C3 H3 017 sing 7 n n C4 C5 017 doub 8 n y C4 H4 017 sing 9 n n C5 C6 017 sing 10 n y C5 S8 017 sing 11 n n C6 C7 017 doub 12 n y C6 H6 017 sing 13 n n C7 H7 017 sing 14 n n S8 O9 017 doub 15 n n S8 O10 017 doub 16 n n S8 N11 017 sing 17 n n N11 C12 017 sing 18 n n N11 C16 017 sing 19 n n C12 C13 017 sing 20 n n C12 H121 017 sing 21 n n C12 H122 017 sing 22 n n C13 C14 017 sing 23 n n C13 C15 017 sing 24 n n C13 H13 017 sing 25 n n C14 H141 017 sing 26 n n C14 H142 017 sing 27 n n C14 H143 017 sing 28 n n C15 H151 017 sing 29 n n C15 H152 017 sing 30 n n C15 H153 017 sing 31 n n C16 C17 017 sing 32 n n C16 H161 017 sing 33 n n C16 H162 017 sing 34 n n C17 O18 017 sing 35 n n C17 C19 017 sing 36 n n C17 H17 017 sing 37 n n O18 H18 017 sing 38 n n C19 N20 017 sing 39 n n C19 C32 017 sing 40 n n C19 H19 017 sing 41 n n N20 C21 017 sing 42 n n N20 H20 017 sing 43 n n C21 O22 017 doub 44 n n C21 O23 017 sing 45 n n O23 C24 017 sing 46 n n C24 C25 017 sing 47 n n C24 C31 017 sing 48 n n C24 H24 017 sing 49 n n C25 O26 017 sing 50 n n C25 H251 017 sing 51 n n C25 H252 017 sing 52 n n O26 C27 017 sing 53 n n C27 O28 017 sing 54 n n C27 C31 017 sing 55 n n C27 H27 017 sing 56 n n O28 C29 017 sing 57 n n C29 C30 017 sing 58 n n C29 H291 017 sing 59 n n C29 H292 017 sing 60 n n C30 C31 017 sing 61 n n C30 H301 017 sing 62 n n C30 H302 017 sing 63 n n C31 H31 017 sing 64 n n C32 C38 017 sing 65 n n C32 H321 017 sing 66 n n C32 H322 017 sing 67 n n C33 C34 017 doub 68 n y C33 C38 017 sing 69 n y C33 H33 017 sing 70 n n C34 C35 017 sing 71 n y C34 H34 017 sing 72 n n C35 C36 017 doub 73 n y C35 H35 017 sing 74 n n C36 C37 017 sing 75 n y C36 H36 017 sing 76 n n C37 C38 017 doub 77 n y C37 H37 017 sing 78 n n # _atom_sites.entry_id 3S53 _atom_sites.fract_transf_matrix[1][1] 0.034565 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015131 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010772 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 017 A 1 201 201 017 017 . D 3 PO4 A 1 801 801 PO4 PO4 . E 4 IOD A 1 902 902 IOD IOD . F 4 IOD A 1 903 903 IOD IOD . G 4 IOD A 1 904 904 IOD IOD . H 4 IOD A 1 905 905 IOD IOD . I 4 IOD A 1 906 906 IOD IOD . J 4 IOD A 1 910 910 IOD IOD . K 2 017 B 1 203 203 017 017 . L 4 IOD B 1 901 901 IOD IOD . M 4 IOD B 1 907 907 IOD IOD . N 4 IOD B 1 908 908 IOD IOD . O 4 IOD B 1 909 909 IOD IOD . P 5 HOH A 1 1001 1001 HOH HOH . P 5 HOH A 2 1002 1002 HOH HOH . P 5 HOH A 3 1003 1003 HOH HOH . P 5 HOH A 4 1004 1004 HOH HOH . P 5 HOH A 5 1007 1007 HOH HOH . P 5 HOH A 6 1009 1009 HOH HOH . P 5 HOH A 7 1012 1012 HOH HOH . P 5 HOH A 8 1013 1013 HOH HOH . P 5 HOH A 9 1016 1016 HOH HOH . P 5 HOH A 10 1020 1020 HOH HOH . P 5 HOH A 11 1021 1021 HOH HOH . P 5 HOH A 12 1022 1022 HOH HOH . P 5 HOH A 13 1023 1023 HOH HOH . P 5 HOH A 14 1024 1024 HOH HOH . P 5 HOH A 15 1025 1025 HOH HOH . P 5 HOH A 16 1026 1026 HOH HOH . P 5 HOH A 17 1028 1028 HOH HOH . P 5 HOH A 18 1031 1031 HOH HOH . P 5 HOH A 19 1032 1032 HOH HOH . P 5 HOH A 20 1033 1033 HOH HOH . P 5 HOH A 21 1036 1036 HOH HOH . P 5 HOH A 22 1037 1037 HOH HOH . P 5 HOH A 23 1039 1039 HOH HOH . P 5 HOH A 24 1041 1041 HOH HOH . P 5 HOH A 25 1047 1047 HOH HOH . P 5 HOH A 26 1048 1048 HOH HOH . P 5 HOH A 27 1050 1050 HOH HOH . P 5 HOH A 28 1054 1054 HOH HOH . P 5 HOH A 29 1055 1055 HOH HOH . P 5 HOH A 30 1056 1056 HOH HOH . P 5 HOH A 31 1057 1057 HOH HOH . P 5 HOH A 32 1058 1058 HOH HOH . P 5 HOH A 33 1060 1060 HOH HOH . P 5 HOH A 34 1065 1065 HOH HOH . P 5 HOH A 35 1066 1066 HOH HOH . P 5 HOH A 36 1068 1068 HOH HOH . P 5 HOH A 37 1070 1070 HOH HOH . P 5 HOH A 38 1074 1074 HOH HOH . P 5 HOH A 39 1077 1077 HOH HOH . P 5 HOH A 40 1080 1080 HOH HOH . P 5 HOH A 41 1081 1081 HOH HOH . P 5 HOH A 42 1082 1082 HOH HOH . P 5 HOH A 43 1083 1083 HOH HOH . P 5 HOH A 44 1084 1084 HOH HOH . P 5 HOH A 45 1086 1086 HOH HOH . P 5 HOH A 46 1095 1095 HOH HOH . P 5 HOH A 47 1096 1096 HOH HOH . P 5 HOH A 48 1100 1100 HOH HOH . P 5 HOH A 49 1101 1101 HOH HOH . P 5 HOH A 50 1106 1106 HOH HOH . P 5 HOH A 51 1107 1107 HOH HOH . P 5 HOH A 52 1109 1109 HOH HOH . P 5 HOH A 53 1110 1110 HOH HOH . P 5 HOH A 54 1111 1111 HOH HOH . P 5 HOH A 55 1112 1112 HOH HOH . P 5 HOH A 56 1114 1114 HOH HOH . P 5 HOH A 57 1117 1117 HOH HOH . P 5 HOH A 58 1118 1118 HOH HOH . P 5 HOH A 59 1119 1119 HOH HOH . P 5 HOH A 60 1120 1120 HOH HOH . P 5 HOH A 61 1126 1126 HOH HOH . Q 5 HOH B 1 1005 1005 HOH HOH . Q 5 HOH B 2 1006 1006 HOH HOH . Q 5 HOH B 3 1008 1008 HOH HOH . Q 5 HOH B 4 1010 1010 HOH HOH . Q 5 HOH B 5 1011 1011 HOH HOH . Q 5 HOH B 6 1014 1014 HOH HOH . Q 5 HOH B 7 1015 1015 HOH HOH . Q 5 HOH B 8 1017 1017 HOH HOH . Q 5 HOH B 9 1018 1018 HOH HOH . Q 5 HOH B 10 1019 1019 HOH HOH . Q 5 HOH B 11 1027 1027 HOH HOH . Q 5 HOH B 12 1029 1029 HOH HOH . Q 5 HOH B 13 1030 1030 HOH HOH . Q 5 HOH B 14 1034 1034 HOH HOH . Q 5 HOH B 15 1035 1035 HOH HOH . Q 5 HOH B 16 1038 1038 HOH HOH . Q 5 HOH B 17 1040 1040 HOH HOH . Q 5 HOH B 18 1042 1042 HOH HOH . Q 5 HOH B 19 1043 1043 HOH HOH . Q 5 HOH B 20 1044 1044 HOH HOH . Q 5 HOH B 21 1045 1045 HOH HOH . Q 5 HOH B 22 1046 1046 HOH HOH . Q 5 HOH B 23 1049 1049 HOH HOH . Q 5 HOH B 24 1051 1051 HOH HOH . Q 5 HOH B 25 1052 1052 HOH HOH . Q 5 HOH B 26 1053 1053 HOH HOH . Q 5 HOH B 27 1059 1059 HOH HOH . Q 5 HOH B 28 1061 1061 HOH HOH . Q 5 HOH B 29 1062 1062 HOH HOH . Q 5 HOH B 30 1063 1063 HOH HOH . Q 5 HOH B 31 1064 1064 HOH HOH . Q 5 HOH B 32 1067 1067 HOH HOH . Q 5 HOH B 33 1069 1069 HOH HOH . Q 5 HOH B 34 1071 1071 HOH HOH . Q 5 HOH B 35 1072 1072 HOH HOH . Q 5 HOH B 36 1073 1073 HOH HOH . Q 5 HOH B 37 1075 1075 HOH HOH . Q 5 HOH B 38 1076 1076 HOH HOH . Q 5 HOH B 39 1078 1078 HOH HOH . Q 5 HOH B 40 1079 1079 HOH HOH . Q 5 HOH B 41 1085 1085 HOH HOH . Q 5 HOH B 42 1087 1087 HOH HOH . Q 5 HOH B 43 1088 1088 HOH HOH . Q 5 HOH B 44 1089 1089 HOH HOH . Q 5 HOH B 45 1090 1090 HOH HOH . Q 5 HOH B 46 1091 1091 HOH HOH . Q 5 HOH B 47 1092 1092 HOH HOH . Q 5 HOH B 48 1093 1093 HOH HOH . Q 5 HOH B 49 1094 1094 HOH HOH . Q 5 HOH B 50 1097 1097 HOH HOH . Q 5 HOH B 51 1098 1098 HOH HOH . Q 5 HOH B 52 1099 1099 HOH HOH . Q 5 HOH B 53 1102 1102 HOH HOH . Q 5 HOH B 54 1104 1104 HOH HOH . Q 5 HOH B 55 1105 1105 HOH HOH . Q 5 HOH B 56 1108 1108 HOH HOH . Q 5 HOH B 57 1113 1113 HOH HOH . Q 5 HOH B 58 1115 1115 HOH HOH . Q 5 HOH B 59 1121 1121 HOH HOH . Q 5 HOH B 60 1122 1122 HOH HOH . Q 5 HOH B 61 1123 1123 HOH HOH . Q 5 HOH B 62 1124 1124 HOH HOH . Q 5 HOH B 63 1125 1125 HOH HOH . Q 5 HOH B 64 1127 1127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 017 . A . K 2 -0.895 20.668 23.994 0.3 17.71 ? N1 017 203 B 1 HETATM 2 C C2 017 . A . K 2 0.322 20.83 23.392 0.3 11.61 ? C2 017 203 B 1 HETATM 3 C C3 017 . A . K 2 1.058 19.731 22.929 0.3 6.77 ? C3 017 203 B 1 HETATM 4 C C4 017 . A . K 2 2.301 19.893 22.303 0.3 3.65 ? C4 017 203 B 1 HETATM 5 C C5 017 . A . K 2 2.807 21.18 22.01 0.3 9.38 ? C5 017 203 B 1 HETATM 6 C C6 017 . A . K 2 2.129 22.264 22.597 0.3 3.86 ? C6 017 203 B 1 HETATM 7 C C7 017 . A . K 2 0.88 22.117 23.225 0.3 6.73 ? C7 017 203 B 1 HETATM 8 S S8 017 . A . K 2 4.504 21.383 21.345 0.3 25.51 ? S8 017 203 B 1 HETATM 9 O O9 017 . A . K 2 4.709 20.461 20.07 0.3 20.07 ? O9 017 203 B 1 HETATM 10 O O10 017 . A . K 2 4.707 22.877 20.824 0.3 32.58 ? O10 017 203 B 1 HETATM 11 N N11 017 . A . K 2 5.771 21.015 22.596 0.3 20.63 ? N11 017 203 B 1 HETATM 12 C C12 017 . A . K 2 5.665 19.564 23.051 0.3 25.85 ? C12 017 203 B 1 HETATM 13 C C13 017 . A . K 2 6.978 18.806 23.294 0.3 30.74 ? C13 017 203 B 1 HETATM 14 C C14 017 . A . K 2 7.999 19.246 22.248 0.3 45.39 ? C14 017 203 B 1 HETATM 15 C C15 017 . A . K 2 6.734 17.308 23.166 0.3 5.93 ? C15 017 203 B 1 HETATM 16 C C16 017 . A . K 2 5.648 21.899 23.836 0.3 20.67 ? C16 017 203 B 1 HETATM 17 C C17 017 . A . K 2 6.503 23.167 24.083 0.3 22.62 ? C17 017 203 B 1 HETATM 18 O O18 017 . A . K 2 5.864 23.971 25.097 0.3 18.07 ? O18 017 203 B 1 HETATM 19 C C19 017 . A . K 2 8.028 23.049 24.403 0.3 29.02 ? C19 017 203 B 1 HETATM 20 N N20 017 . A . K 2 8.847 23.947 23.65 0.3 27.23 ? N20 017 203 B 1 HETATM 21 C C21 017 . A . K 2 9.453 23.783 22.437 0.3 26.03 ? C21 017 203 B 1 HETATM 22 O O22 017 . A . K 2 9.154 22.806 21.661 0.3 20.98 ? O22 017 203 B 1 HETATM 23 O O23 017 . A . K 2 10.464 24.719 21.989 0.3 26.59 ? O23 017 203 B 1 HETATM 24 C C24 017 . A . K 2 10.004 26.099 21.836 0.3 23.53 ? C24 017 203 B 1 HETATM 25 C C25 017 . A . K 2 9.666 26.788 23.175 0.3 22.22 ? C25 017 203 B 1 HETATM 26 O O26 017 . A . K 2 10.619 27.843 23.472 0.3 22.27 ? O26 017 203 B 1 HETATM 27 C C27 017 . A . K 2 11.687 27.533 22.582 0.3 17.02 ? C27 017 203 B 1 HETATM 28 O O28 017 . A . K 2 12.593 26.487 22.949 0.3 19.65 ? O28 017 203 B 1 HETATM 29 C C29 017 . A . K 2 13.14 26.122 21.647 0.3 24.65 ? C29 017 203 B 1 HETATM 30 C C30 017 . A . K 2 12.26 26.732 20.535 0.3 21.5 ? C30 017 203 B 1 HETATM 31 C C31 017 . A . K 2 11.043 27.083 21.336 0.3 19.89 ? C31 017 203 B 1 HETATM 32 C C32 017 . A . K 2 8.605 21.607 24.472 0.3 34.13 ? C32 017 203 B 1 HETATM 33 C C33 017 . A . K 2 11.02 22.36 24.966 0.3 36.89 ? C33 017 203 B 1 HETATM 34 C C34 017 . A . K 2 12.393 22.086 25.124 0.3 39 ? C34 017 203 B 1 HETATM 35 C C35 017 . A . K 2 12.872 20.776 24.963 0.3 40.76 ? C35 017 203 B 1 HETATM 36 C C36 017 . A . K 2 11.966 19.748 24.654 0.3 39.29 ? C36 017 203 B 1 HETATM 37 C C37 017 . A . K 2 10.597 20.035 24.499 0.3 40.21 ? C37 017 203 B 1 HETATM 38 C C38 017 . A . K 2 10.098 21.349 24.641 0.3 37.45 ? C38 017 203 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 38 #