data_3S61
#
_model_server_result.job_id            28LqHHgomfLX_eovp8uivw 
_model_server_result.datetime_utc      '2024-10-17 03:30:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3s61 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":444}' 
#
_entry.id    3S61 
#
_exptl.entry_id    3S61 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3S61 
_cell.length_a            128.162 
_cell.length_b            128.162 
_cell.length_c            316.514 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3S61 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        98 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 41 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E 1 1 
B,F,G,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     3S61 
_atom_sites.fract_transf_matrix[1][1]    0.007803 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007803 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003159 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 444 440 FAD FAD . 
D 3 ORN A 1 445 441 ORN ORN . 
E 4 NDP A 1 446 442 NDP NDP . 
F 2 FAD B 1 444 440 FAD FAD . 
G 3 ORN B 1 445 441 ORN ORN . 
H 4 NDP B 1 446 442 NDP NDP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . C 2 15.527 -46.626 -22.773 1 71.11 ? PA FAD 444 A 1 
HETATM 2 O O1A FAD . . . C 2 14.676 -45.54 -22.162 1 69.48 ? O1A FAD 444 A 1 
HETATM 3 O O2A FAD . . . C 2 16.041 -46.235 -24.139 1 70.07 ? O2A FAD 444 A 1 
HETATM 4 O O5B FAD . . . C 2 14.71 -48 -22.799 1 74.03 ? O5B FAD 444 A 1 
HETATM 5 C C5B FAD . . . C 2 13.747 -48.346 -21.828 1 77 ? C5B FAD 444 A 1 
HETATM 6 C C4B FAD . . . C 2 12.595 -49.041 -22.544 1 79.7 ? C4B FAD 444 A 1 
HETATM 7 O O4B FAD . . . C 2 11.882 -49.86 -21.653 1 80.67 ? O4B FAD 444 A 1 
HETATM 8 C C3B FAD . . . C 2 11.584 -48.05 -23.093 1 81.31 ? C3B FAD 444 A 1 
HETATM 9 O O3B FAD . . . C 2 11.033 -48.629 -24.246 1 81.74 ? O3B FAD 444 A 1 
HETATM 10 C C2B FAD . . . C 2 10.495 -47.961 -22.049 1 82.08 ? C2B FAD 444 A 1 
HETATM 11 O O2B FAD . . . C 2 9.256 -47.582 -22.639 1 82.32 ? O2B FAD 444 A 1 
HETATM 12 C C1B FAD . . . C 2 10.556 -49.386 -21.489 1 81.38 ? C1B FAD 444 A 1 
HETATM 13 N N9A FAD . . . C 2 10.224 -49.531 -20.055 1 81.28 ? N9A FAD 444 A 1 
HETATM 14 C C8A FAD . . . C 2 10.339 -48.623 -19.027 1 80.94 ? C8A FAD 444 A 1 
HETATM 15 N N7A FAD . . . C 2 9.907 -49.222 -17.893 1 80.55 ? N7A FAD 444 A 1 
HETATM 16 C C5A FAD . . . C 2 9.527 -50.489 -18.189 1 80.36 ? C5A FAD 444 A 1 
HETATM 17 C C6A FAD . . . C 2 9.002 -51.523 -17.424 1 80.19 ? C6A FAD 444 A 1 
HETATM 18 N N6A FAD . . . C 2 8.194 -51.162 -16.434 1 81.16 ? N6A FAD 444 A 1 
HETATM 19 N N1A FAD . . . C 2 8.72 -52.731 -18.039 1 79.6 ? N1A FAD 444 A 1 
HETATM 20 C C2A FAD . . . C 2 8.914 -52.921 -19.394 1 78.73 ? C2A FAD 444 A 1 
HETATM 21 N N3A FAD . . . C 2 9.42 -51.882 -20.137 1 79.14 ? N3A FAD 444 A 1 
HETATM 22 C C4A FAD . . . C 2 9.721 -50.695 -19.544 1 80.24 ? C4A FAD 444 A 1 
HETATM 23 N N1 FAD . . . C 2 21.889 -40.767 -25.304 1 77.36 ? N1 FAD 444 A 1 
HETATM 24 C C2 FAD . . . C 2 22.901 -40.716 -26.232 1 78.06 ? C2 FAD 444 A 1 
HETATM 25 O O2 FAD . . . C 2 23.971 -41.253 -25.978 1 78.29 ? O2 FAD 444 A 1 
HETATM 26 N N3 FAD . . . C 2 22.716 -40.067 -27.443 1 79.92 ? N3 FAD 444 A 1 
HETATM 27 C C4 FAD . . . C 2 21.502 -39.454 -27.744 1 80.58 ? C4 FAD 444 A 1 
HETATM 28 O O4 FAD . . . C 2 21.33 -38.873 -28.833 1 80.95 ? O4 FAD 444 A 1 
HETATM 29 C C4X FAD . . . C 2 20.48 -39.514 -26.791 1 78.62 ? C4X FAD 444 A 1 
HETATM 30 N N5 FAD . . . C 2 19.274 -38.928 -27.064 1 77.2 ? N5 FAD 444 A 1 
HETATM 31 C C5X FAD . . . C 2 18.273 -38.983 -26.14 1 77.02 ? C5X FAD 444 A 1 
HETATM 32 C C6 FAD . . . C 2 17.064 -38.372 -26.455 1 76.95 ? C6 FAD 444 A 1 
HETATM 33 C C7 FAD . . . C 2 16.032 -38.407 -25.525 1 77.25 ? C7 FAD 444 A 1 
HETATM 34 C C7M FAD . . . C 2 14.742 -37.748 -25.889 1 76.69 ? C7M FAD 444 A 1 
HETATM 35 C C8 FAD . . . C 2 16.217 -39.06 -24.292 1 77.95 ? C8 FAD 444 A 1 
HETATM 36 C C8M FAD . . . C 2 15.124 -39.136 -23.27 1 78.86 ? C8M FAD 444 A 1 
HETATM 37 C C9 FAD . . . C 2 17.429 -39.68 -23.989 1 77.61 ? C9 FAD 444 A 1 
HETATM 38 C C9A FAD . . . C 2 18.468 -39.642 -24.92 1 77.03 ? C9A FAD 444 A 1 
HETATM 39 N N10 FAD . . . C 2 19.681 -40.241 -24.646 1 76.89 ? N10 FAD 444 A 1 
HETATM 40 C C10 FAD . . . C 2 20.682 -40.171 -25.58 1 77.39 ? C10 FAD 444 A 1 
HETATM 41 C C1' FAD . . . C 2 19.948 -40.953 -23.346 1 75.87 ? C1' FAD 444 A 1 
HETATM 42 C C2' FAD . . . C 2 19.235 -42.301 -23.342 1 74.58 ? C2' FAD 444 A 1 
HETATM 43 O O2' FAD . . . C 2 19.013 -42.657 -22.004 1 75.97 ? O2' FAD 444 A 1 
HETATM 44 C C3' FAD . . . C 2 20.042 -43.403 -24.014 1 72.11 ? C3' FAD 444 A 1 
HETATM 45 O O3' FAD . . . C 2 20.37 -43.012 -25.316 1 72.19 ? O3' FAD 444 A 1 
HETATM 46 C C4' FAD . . . C 2 19.255 -44.689 -24.131 1 70.19 ? C4' FAD 444 A 1 
HETATM 47 O O4' FAD . . . C 2 17.893 -44.405 -24.312 1 68.5 ? O4' FAD 444 A 1 
HETATM 48 C C5' FAD . . . C 2 19.422 -45.552 -22.894 1 70.91 ? C5' FAD 444 A 1 
HETATM 49 O O5' FAD . . . C 2 18.914 -46.806 -23.269 1 71.85 ? O5' FAD 444 A 1 
HETATM 50 P P FAD . . . C 2 18.07 -47.768 -22.301 1 70.29 ? P FAD 444 A 1 
HETATM 51 O O1P FAD . . . C 2 17.71 -48.949 -23.145 1 71.17 ? O1P FAD 444 A 1 
HETATM 52 O O2P FAD . . . C 2 18.879 -48.119 -21.094 1 69.81 ? O2P FAD 444 A 1 
HETATM 53 O O3P FAD . . . C 2 16.74 -47.011 -21.805 1 70.64 ? O3P FAD 444 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           53 
#