data_3S67 # _model_server_result.job_id 1XI1PNg8bxikH_bCItnqsg _model_server_result.datetime_utc '2024-11-02 11:54:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3s67 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":124}' # _entry.id 3S67 # _exptl.entry_id 3S67 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3S67 _cell.length_a 140.135 _cell.length_b 140.135 _cell.length_c 140.135 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3S67 _symmetry.cell_setting ? _symmetry.Int_Tables_number 211 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 140.135 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 73 A CYS 73 1_555 A SG CYS 83 A CYS 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf2 A SG CYS 97 A CYS 97 1_555 A SG CYS 117 A CYS 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 179 n y N1 C5 IMD sing 180 n y N1 HN1 IMD sing 181 n n C2 N3 IMD doub 182 n y C2 H2 IMD sing 183 n n N3 C4 IMD sing 184 n y N3 HN3 IMD sing 185 n n C4 C5 IMD doub 186 n y C4 H4 IMD sing 187 n n C5 H5 IMD sing 188 n n # _atom_sites.entry_id 3S67 _atom_sites.fract_transf_matrix[1][1] 0.007136 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007136 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007136 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PEG A 1 121 1 PEG PEG . C 2 PEG A 1 122 2 PEG PEG . D 2 PEG A 1 123 3 PEG PEG . E 3 IMD A 1 124 1 IMD IMD . F 3 IMD A 1 125 2 IMD IMD . G 4 ACT A 1 126 1 ACT ACT . H 4 ACT A 1 127 2 ACT ACT . I 5 CL A 1 128 1 CL CL . J 4 ACT A 1 129 3 ACT ACT . K 6 HOH A 1 130 1 HOH HOH . K 6 HOH A 2 131 2 HOH HOH . K 6 HOH A 3 132 3 HOH HOH . K 6 HOH A 4 133 4 HOH HOH . K 6 HOH A 5 134 5 HOH HOH . K 6 HOH A 6 135 6 HOH HOH . K 6 HOH A 7 136 7 HOH HOH . K 6 HOH A 8 137 8 HOH HOH . K 6 HOH A 9 138 9 HOH HOH . K 6 HOH A 10 139 10 HOH HOH . K 6 HOH A 11 140 11 HOH HOH . K 6 HOH A 12 141 12 HOH HOH . K 6 HOH A 13 142 13 HOH HOH . K 6 HOH A 14 143 15 HOH HOH . K 6 HOH A 15 144 16 HOH HOH . K 6 HOH A 16 145 17 HOH HOH . K 6 HOH A 17 146 18 HOH HOH . K 6 HOH A 18 147 19 HOH HOH . K 6 HOH A 19 148 20 HOH HOH . K 6 HOH A 20 149 21 HOH HOH . K 6 HOH A 21 150 22 HOH HOH . K 6 HOH A 22 151 23 HOH HOH . K 6 HOH A 23 152 25 HOH HOH . K 6 HOH A 24 153 26 HOH HOH . K 6 HOH A 25 154 27 HOH HOH . K 6 HOH A 26 155 28 HOH HOH . K 6 HOH A 27 156 29 HOH HOH . K 6 HOH A 28 157 32 HOH HOH . K 6 HOH A 29 158 33 HOH HOH . K 6 HOH A 30 159 34 HOH HOH . K 6 HOH A 31 160 35 HOH HOH . K 6 HOH A 32 161 36 HOH HOH . K 6 HOH A 33 162 37 HOH HOH . K 6 HOH A 34 163 41 HOH HOH . K 6 HOH A 35 164 43 HOH HOH . K 6 HOH A 36 165 46 HOH HOH . K 6 HOH A 37 166 48 HOH HOH . K 6 HOH A 38 167 53 HOH HOH . K 6 HOH A 39 168 54 HOH HOH . K 6 HOH A 40 169 56 HOH HOH . K 6 HOH A 41 170 57 HOH HOH . K 6 HOH A 42 171 60 HOH HOH . K 6 HOH A 43 172 61 HOH HOH . K 6 HOH A 44 173 62 HOH HOH . K 6 HOH A 45 174 63 HOH HOH . K 6 HOH A 46 175 66 HOH HOH . K 6 HOH A 47 176 67 HOH HOH . K 6 HOH A 48 177 68 HOH HOH . K 6 HOH A 49 178 69 HOH HOH . K 6 HOH A 50 179 70 HOH HOH . K 6 HOH A 51 180 71 HOH HOH . K 6 HOH A 52 181 72 HOH HOH . K 6 HOH A 53 182 73 HOH HOH . K 6 HOH A 54 183 74 HOH HOH . K 6 HOH A 55 184 75 HOH HOH . K 6 HOH A 56 185 76 HOH HOH . K 6 HOH A 57 186 77 HOH HOH . K 6 HOH A 58 187 78 HOH HOH . K 6 HOH A 59 188 79 HOH HOH . K 6 HOH A 60 189 80 HOH HOH . K 6 HOH A 61 190 81 HOH HOH . K 6 HOH A 62 191 82 HOH HOH . K 6 HOH A 63 192 83 HOH HOH . K 6 HOH A 64 193 84 HOH HOH . K 6 HOH A 65 194 85 HOH HOH . K 6 HOH A 66 195 86 HOH HOH . K 6 HOH A 67 196 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . E 3 69.222 -0.363 22.419 0.5 110.89 ? N1 IMD 124 A 1 HETATM 2 C C2 IMD . . . E 3 70.488 0.123 22.391 0.5 111.93 ? C2 IMD 124 A 1 HETATM 3 N N3 IMD . . . E 3 70.909 0.326 23.658 0.5 110.79 ? N3 IMD 124 A 1 HETATM 4 C C4 IMD . . . E 3 69.898 -0.031 24.482 0.5 111.21 ? C4 IMD 124 A 1 HETATM 5 C C5 IMD . . . E 3 68.833 -0.466 23.707 0.5 109.98 ? C5 IMD 124 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 230 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #