data_3S6H # _model_server_result.job_id AhNu1hkF50ZmphFbCTaaNw _model_server_result.datetime_utc '2024-12-22 01:15:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3s6h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 3S6H # _exptl.entry_id 3S6H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 147.129 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GLUTAMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3S6H _cell.length_a 114.587 _cell.length_b 118.211 _cell.length_c 152.279 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3S6H _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,J 1 1 B,D,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N # _chem_comp.formula 'C5 H9 N O4' _chem_comp.formula_weight 147.129 _chem_comp.id GLU _chem_comp.mon_nstd_flag y _chem_comp.name 'GLUTAMIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA GLU sing 188 n n N H GLU sing 189 n n N H2 GLU sing 190 n n CA C GLU sing 191 n n CA CB GLU sing 192 n n CA HA GLU sing 193 n n C O GLU doub 194 n n C OXT GLU sing 195 n n CB CG GLU sing 196 n n CB HB2 GLU sing 197 n n CB HB3 GLU sing 198 n n CG CD GLU sing 199 n n CG HG2 GLU sing 200 n n CG HG3 GLU sing 201 n n CD OE1 GLU doub 202 n n CD OE2 GLU sing 203 n n OE2 HE2 GLU sing 204 n n OXT HXT GLU sing 205 n n # _atom_sites.entry_id 3S6H _atom_sites.fract_transf_matrix[1][1] 0.008727 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008459 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006567 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GLU A 1 501 1 GLU GLU . F 3 COA X 1 501 2 COA COA . G 3 COA Y 1 501 1 COA COA . H 2 GLU Y 1 502 1 GLU GLU . I 4 HOH B 1 501 1 HOH HOH . I 4 HOH B 2 502 6 HOH HOH . J 4 HOH X 1 601 2 HOH HOH . J 4 HOH X 2 602 3 HOH HOH . J 4 HOH X 3 603 5 HOH HOH . K 4 HOH Y 1 601 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N GLU . . . E 2 11.069 -20.637 71.206 1 117.54 ? N GLU 501 A 1 HETATM 2 C CA GLU . . . E 2 10.01 -20.083 72.053 1 105.16 ? CA GLU 501 A 1 HETATM 3 C C GLU . . . E 2 9.779 -20.914 73.337 1 112.39 ? C GLU 501 A 1 HETATM 4 O O GLU . . . E 2 9.576 -22.135 73.312 1 128.06 ? O GLU 501 A 1 HETATM 5 C CB GLU . . . E 2 8.695 -19.942 71.269 1 72.42 ? CB GLU 501 A 1 HETATM 6 C CG GLU . . . E 2 8.792 -19.879 69.731 1 54.29 ? CG GLU 501 A 1 HETATM 7 C CD GLU . . . E 2 7.403 -20.171 69.074 1 102.31 ? CD GLU 501 A 1 HETATM 8 O OE1 GLU . . . E 2 6.764 -21.187 69.443 1 108.71 ? OE1 GLU 501 A 1 HETATM 9 O OE2 GLU . . . E 2 6.927 -19.395 68.206 1 71.85 ? OE2 GLU 501 A 1 HETATM 10 O OXT GLU . . . E 2 9.78 -20.386 74.449 1 88.47 ? OXT GLU 501 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 44 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #