data_3S6H # _model_server_result.job_id op9lNY0LFXQUv_z9gbUxRw _model_server_result.datetime_utc '2024-12-22 01:28:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3s6h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 3S6H # _exptl.entry_id 3S6H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3S6H _cell.length_a 114.587 _cell.length_b 118.211 _cell.length_c 152.279 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3S6H _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,J 1 1 B,D,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 3S6H _atom_sites.fract_transf_matrix[1][1] 0.008727 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008459 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006567 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GLU A 1 501 1 GLU GLU . F 3 COA X 1 501 2 COA COA . G 3 COA Y 1 501 1 COA COA . H 2 GLU Y 1 502 1 GLU GLU . I 4 HOH B 1 501 1 HOH HOH . I 4 HOH B 2 502 6 HOH HOH . J 4 HOH X 1 601 2 HOH HOH . J 4 HOH X 2 602 3 HOH HOH . J 4 HOH X 3 603 5 HOH HOH . K 4 HOH Y 1 601 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . F 3 22.236 -31.689 55.603 1 199.59 ? N1A COA 501 X 1 HETATM 2 C C2A COA . . . F 3 22.379 -32.414 56.802 1 195.43 ? C2A COA 501 X 1 HETATM 3 N N3A COA . . . F 3 21.227 -33.087 57.404 1 193.45 ? N3A COA 501 X 1 HETATM 4 C C4A COA . . . F 3 19.98 -33.009 56.788 1 196.3 ? C4A COA 501 X 1 HETATM 5 C C5A COA . . . F 3 19.818 -32.264 55.557 1 200.95 ? C5A COA 501 X 1 HETATM 6 C C6A COA . . . F 3 20.947 -31.608 54.967 1 205.09 ? C6A COA 501 X 1 HETATM 7 N N6A COA . . . F 3 20.792 -30.859 53.721 1 209.86 ? N6A COA 501 X 1 HETATM 8 N N7A COA . . . F 3 18.395 -32.354 55.142 1 200.84 ? N7A COA 501 X 1 HETATM 9 C C8A COA . . . F 3 17.711 -33.132 56.097 1 200.56 ? C8A COA 501 X 1 HETATM 10 N N9A COA . . . F 3 18.708 -33.55 57.138 1 198.7 ? N9A COA 501 X 1 HETATM 11 C C1B COA . . . F 3 18.41 -34.348 58.329 1 197.57 ? C1B COA 501 X 1 HETATM 12 C C2B COA . . . F 3 18.901 -33.799 59.735 1 175.9 ? C2B COA 501 X 1 HETATM 13 O O2B COA . . . F 3 20.117 -34.211 60.279 1 168.44 ? O2B COA 501 X 1 HETATM 14 C C3B COA . . . F 3 17.602 -33.748 60.577 1 167.05 ? C3B COA 501 X 1 HETATM 15 O O3B COA . . . F 3 17.62 -33.582 61.955 1 159.16 ? O3B COA 501 X 1 HETATM 16 P P3B COA . . . F 3 18.413 -32.43 62.682 1 178.55 ? P3B COA 501 X 1 HETATM 17 O O7A COA . . . F 3 19.109 -33.011 63.958 1 177.62 ? O7A COA 501 X 1 HETATM 18 O O8A COA . . . F 3 19.504 -31.8 61.752 1 214.83 ? O8A COA 501 X 1 HETATM 19 O O9A COA . . . F 3 17.47 -31.349 63.118 1 187.7 ? O9A COA 501 X 1 HETATM 20 C C4B COA . . . F 3 16.774 -34.927 59.983 1 183.16 ? C4B COA 501 X 1 HETATM 21 O O4B COA . . . F 3 17.214 -35.15 58.596 1 190.53 ? O4B COA 501 X 1 HETATM 22 C C5B COA . . . F 3 15.271 -35.071 60.304 1 180.57 ? C5B COA 501 X 1 HETATM 23 O O5B COA . . . F 3 14.61 -36.153 59.739 1 178.35 ? O5B COA 501 X 1 HETATM 24 P P1A COA . . . F 3 13.742 -37.125 60.652 1 204.96 ? P1A COA 501 X 1 HETATM 25 O O1A COA . . . F 3 13.384 -36.387 62 1 142.23 ? O1A COA 501 X 1 HETATM 26 O O2A COA . . . F 3 14.55 -38.37 60.976 1 200.6 ? O2A COA 501 X 1 HETATM 27 O O3A COA . . . F 3 12.407 -37.516 59.894 1 449.4 ? O3A COA 501 X 1 HETATM 28 P P2A COA . . . F 3 11.241 -38.251 60.659 1 380.48 ? P2A COA 501 X 1 HETATM 29 O O4A COA . . . F 3 9.957 -38.421 59.801 1 102.62 ? O4A COA 501 X 1 HETATM 30 O O5A COA . . . F 3 11.72 -39.595 61.083 1 381.24 ? O5A COA 501 X 1 HETATM 31 O O6A COA . . . F 3 10.862 -37.383 61.947 1 101.85 ? O6A COA 501 X 1 HETATM 32 C CBP COA . . . F 3 11.455 -38.31 64.231 1 102.66 ? CBP COA 501 X 1 HETATM 33 C CCP COA . . . F 3 10.444 -38.066 63.099 1 106.7 ? CCP COA 501 X 1 HETATM 34 C CDP COA . . . F 3 11.612 -36.987 64.951 1 97.78 ? CDP COA 501 X 1 HETATM 35 C CEP COA . . . F 3 12.834 -38.719 63.707 1 91.92 ? CEP COA 501 X 1 HETATM 36 C CAP COA . . . F 3 10.923 -39.471 65.155 1 153.34 ? CAP COA 501 X 1 HETATM 37 O OAP COA . . . F 3 11.656 -39.692 66.333 1 146.35 ? OAP COA 501 X 1 HETATM 38 C C9P COA . . . F 3 9.418 -39.605 65.328 1 152.05 ? C9P COA 501 X 1 HETATM 39 O O9P COA . . . F 3 8.771 -38.791 65.986 1 144.85 ? O9P COA 501 X 1 HETATM 40 N N8P COA . . . F 3 8.775 -40.84 64.781 1 149.59 ? N8P COA 501 X 1 HETATM 41 C C7P COA . . . F 3 7.426 -41.262 65.06 1 128.23 ? C7P COA 501 X 1 HETATM 42 C C6P COA . . . F 3 6.452 -41.065 63.941 1 130.51 ? C6P COA 501 X 1 HETATM 43 C C5P COA . . . F 3 5.092 -40.688 64.474 1 156.7 ? C5P COA 501 X 1 HETATM 44 O O5P COA . . . F 3 4.234 -40.315 63.701 1 159.62 ? O5P COA 501 X 1 HETATM 45 N N4P COA . . . F 3 4.801 -40.88 65.902 1 164.01 ? N4P COA 501 X 1 HETATM 46 C C3P COA . . . F 3 3.432 -40.767 66.428 1 155.3 ? C3P COA 501 X 1 HETATM 47 C C2P COA . . . F 3 2.763 -42.007 66.956 1 149.87 ? C2P COA 501 X 1 HETATM 48 S S1P COA . . . F 3 3.398 -43.593 66.547 1 131.88 ? S1P COA 501 X 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 46 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 48 #