data_3S6H # _model_server_result.job_id w8J4Q3kX3_cN7GViz-VvoA _model_server_result.datetime_utc '2024-12-22 01:20:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3s6h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":501}' # _entry.id 3S6H # _exptl.entry_id 3S6H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3S6H _cell.length_a 114.587 _cell.length_b 118.211 _cell.length_c 152.279 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3S6H _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,J 1 1 B,D,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 3S6H _atom_sites.fract_transf_matrix[1][1] 0.008727 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008459 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006567 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GLU A 1 501 1 GLU GLU . F 3 COA X 1 501 2 COA COA . G 3 COA Y 1 501 1 COA COA . H 2 GLU Y 1 502 1 GLU GLU . I 4 HOH B 1 501 1 HOH HOH . I 4 HOH B 2 502 6 HOH HOH . J 4 HOH X 1 601 2 HOH HOH . J 4 HOH X 2 602 3 HOH HOH . J 4 HOH X 3 603 5 HOH HOH . K 4 HOH Y 1 601 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . G 3 92.753 34.521 66.142 1 181.03 ? N1A COA 501 Y 1 HETATM 2 C C2A COA . . . G 3 92.293 34.942 67.404 1 179.56 ? C2A COA 501 Y 1 HETATM 3 N N3A COA . . . G 3 93.116 35.832 68.236 1 177.21 ? N3A COA 501 Y 1 HETATM 4 C C4A COA . . . G 3 94.364 36.268 67.778 1 171.56 ? C4A COA 501 Y 1 HETATM 5 C C5A COA . . . G 3 94.844 35.832 66.474 1 180.34 ? C5A COA 501 Y 1 HETATM 6 C C6A COA . . . G 3 94.032 34.958 65.658 1 182.25 ? C6A COA 501 Y 1 HETATM 7 N N6A COA . . . G 3 94.487 34.522 64.337 1 177.12 ? N6A COA 501 Y 1 HETATM 8 N N7A COA . . . G 3 96.187 36.446 66.264 1 171.28 ? N7A COA 501 Y 1 HETATM 9 C C8A COA . . . G 3 96.5 37.215 67.398 1 161.21 ? C8A COA 501 Y 1 HETATM 10 N N9A COA . . . G 3 95.354 37.116 68.356 1 153.72 ? N9A COA 501 Y 1 HETATM 11 C C1B COA . . . G 3 95.3 37.725 69.684 1 132.25 ? C1B COA 501 Y 1 HETATM 12 C C2B COA . . . G 3 94.668 36.847 70.837 1 171.89 ? C2B COA 501 Y 1 HETATM 13 O O2B COA . . . G 3 93.341 36.477 70.753 1 173.46 ? O2B COA 501 Y 1 HETATM 14 C C3B COA . . . G 3 95.224 37.39 72.169 1 170.97 ? C3B COA 501 Y 1 HETATM 15 O O3B COA . . . G 3 94.358 37.428 73.258 1 166.88 ? O3B COA 501 Y 1 HETATM 16 P P3B COA . . . G 3 94.03 36.135 74.113 1 425.38 ? P3B COA 501 Y 1 HETATM 17 O O7A COA . . . G 3 93.978 36.509 75.626 1 82.69 ? O7A COA 501 Y 1 HETATM 18 O O8A COA . . . G 3 92.636 35.514 73.757 1 115.83 ? O8A COA 501 Y 1 HETATM 19 O O9A COA . . . G 3 95.094 35.104 73.899 1 425.97 ? O9A COA 501 Y 1 HETATM 20 C C4B COA . . . G 3 96.073 38.642 71.768 1 99.52 ? C4B COA 501 Y 1 HETATM 21 O O4B COA . . . G 3 96.301 38.604 70.313 1 115.01 ? O4B COA 501 Y 1 HETATM 22 C C5B COA . . . G 3 97.236 39.14 72.651 1 85.13 ? C5B COA 501 Y 1 HETATM 23 O O5B COA . . . G 3 97.841 40.34 72.266 1 80.75 ? O5B COA 501 Y 1 HETATM 24 P P1A COA . . . G 3 97.958 41.518 73.333 1 153.35 ? P1A COA 501 Y 1 HETATM 25 O O1A COA . . . G 3 97.06 41.165 74.582 1 434.16 ? O1A COA 501 Y 1 HETATM 26 O O2A COA . . . G 3 97.46 42.806 72.705 1 150.92 ? O2A COA 501 Y 1 HETATM 27 O O3A COA . . . G 3 99.453 41.669 73.805 1 78.72 ? O3A COA 501 Y 1 HETATM 28 P P2A COA . . . G 3 99.929 42.687 74.899 1 246.86 ? P2A COA 501 Y 1 HETATM 29 O O4A COA . . . G 3 101.475 42.741 74.952 1 240.74 ? O4A COA 501 Y 1 HETATM 30 O O5A COA . . . G 3 99.391 44.034 74.573 1 256.61 ? O5A COA 501 Y 1 HETATM 31 O O6A COA . . . G 3 99.383 42.238 76.331 1 88.71 ? O6A COA 501 Y 1 HETATM 32 C CBP COA . . . G 3 98.409 44.074 77.771 1 107.49 ? CBP COA 501 Y 1 HETATM 33 C CCP COA . . . G 3 99.567 43.132 77.406 1 102.78 ? CCP COA 501 Y 1 HETATM 34 C CDP COA . . . G 3 97.669 43.565 78.99 1 115.4 ? CDP COA 501 Y 1 HETATM 35 C CEP COA . . . G 3 97.417 44.195 76.613 1 92.99 ? CEP COA 501 Y 1 HETATM 36 C CAP COA . . . G 3 98.961 45.487 78.122 1 140.1 ? CAP COA 501 Y 1 HETATM 37 O OAP COA . . . G 3 97.96 46.451 78.337 1 149.09 ? OAP COA 501 Y 1 HETATM 38 C C9P COA . . . G 3 100.043 45.495 79.168 1 110.66 ? C9P COA 501 Y 1 HETATM 39 O O9P COA . . . G 3 99.775 45.314 80.364 1 80.57 ? O9P COA 501 Y 1 HETATM 40 N N8P COA . . . G 3 101.436 45.683 78.683 1 111.77 ? N8P COA 501 Y 1 HETATM 41 C C7P COA . . . G 3 102.165 46.931 78.753 1 107.98 ? C7P COA 501 Y 1 HETATM 42 C C6P COA . . . G 3 103.02 47.309 77.575 1 97.78 ? C6P COA 501 Y 1 HETATM 43 C C5P COA . . . G 3 104.489 47.271 77.908 1 122.91 ? C5P COA 501 Y 1 HETATM 44 O O5P COA . . . G 3 105.293 47.267 77.004 1 141.13 ? O5P COA 501 Y 1 HETATM 45 N N4P COA . . . G 3 104.936 47.148 79.299 1 123.64 ? N4P COA 501 Y 1 HETATM 46 C C3P COA . . . G 3 106.367 47.214 79.636 1 114.21 ? C3P COA 501 Y 1 HETATM 47 C C2P COA . . . G 3 106.784 47.868 80.924 1 111.49 ? C2P COA 501 Y 1 HETATM 48 S S1P COA . . . G 3 106.158 49.45 81.331 1 171.24 ? S1P COA 501 Y 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 39 _model_server_stats.query_time_ms 967 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 48 #