data_3S8B # _model_server_result.job_id fq7rAhKRh1eMjLBKQm4f-g _model_server_result.datetime_utc '2024-11-04 23:10:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3s8b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":891}' # _entry.id 3S8B # _exptl.entry_id 3S8B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3S8B _cell.length_a 107.869 _cell.length_b 117.567 _cell.length_c 64.967 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3S8B _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 117.567 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C O3A ANP . A ANP 890 1_555 D MG MG . A MG 891 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc2 C O1G ANP . A ANP 890 1_555 D MG MG . A MG 891 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc3 C O2A ANP . A ANP 890 1_555 D MG MG . A MG 891 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.913 ? metalc ? metalc4 C O1B ANP . A ANP 890 1_555 D MG MG . A MG 891 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.922 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3S8B _atom_sites.fract_transf_matrix[1][1] 0.009271 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008506 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015392 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CDP A 1 889 1 CDP CDP . C 3 ANP A 1 890 1 ANP ANP . D 4 MG A 1 891 1 MG MG . E 5 HOH A 1 892 1 HOH HOH . E 5 HOH A 2 893 2 HOH HOH . E 5 HOH A 3 894 4 HOH HOH . E 5 HOH A 4 895 5 HOH HOH . E 5 HOH A 5 896 6 HOH HOH . E 5 HOH A 6 897 9 HOH HOH . E 5 HOH A 7 898 10 HOH HOH . E 5 HOH A 8 899 11 HOH HOH . E 5 HOH A 9 900 12 HOH HOH . E 5 HOH A 10 901 13 HOH HOH . E 5 HOH A 11 902 14 HOH HOH . E 5 HOH A 12 903 16 HOH HOH . E 5 HOH A 13 904 18 HOH HOH . E 5 HOH A 14 905 19 HOH HOH . E 5 HOH A 15 906 20 HOH HOH . E 5 HOH A 16 907 21 HOH HOH . E 5 HOH A 17 908 22 HOH HOH . E 5 HOH A 18 909 23 HOH HOH . E 5 HOH A 19 910 25 HOH HOH . E 5 HOH A 20 911 26 HOH HOH . E 5 HOH A 21 912 27 HOH HOH . E 5 HOH A 22 913 35 HOH HOH . E 5 HOH A 23 914 37 HOH HOH . E 5 HOH A 24 915 39 HOH HOH . E 5 HOH A 25 916 42 HOH HOH . E 5 HOH A 26 917 43 HOH HOH . E 5 HOH A 27 918 45 HOH HOH . E 5 HOH A 28 919 47 HOH HOH . E 5 HOH A 29 920 48 HOH HOH . E 5 HOH A 30 921 49 HOH HOH . E 5 HOH A 31 922 51 HOH HOH . E 5 HOH A 32 923 52 HOH HOH . E 5 HOH A 33 924 57 HOH HOH . E 5 HOH A 34 925 58 HOH HOH . E 5 HOH A 35 926 59 HOH HOH . E 5 HOH A 36 927 60 HOH HOH . E 5 HOH A 37 928 61 HOH HOH . E 5 HOH A 38 929 63 HOH HOH . E 5 HOH A 39 930 65 HOH HOH . E 5 HOH A 40 931 67 HOH HOH . E 5 HOH A 41 932 68 HOH HOH . E 5 HOH A 42 933 71 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -10.238 _atom_site.Cartn_y 46.456 _atom_site.Cartn_z 27.715 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 42.95 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 891 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #