data_3S8X
#
_model_server_result.job_id            wNhacikRIzwQ4xYPcr-5YA 
_model_server_result.datetime_utc      '2024-10-18 16:24:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3s8x 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":264}' 
#
_entry.id    3S8X 
#
_exptl.entry_id    3S8X 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.29 
_cell.angle_gamma         90 
_cell.entry_id            3S8X 
_cell.length_a            42.208 
_cell.length_b            41.18 
_cell.length_c            71.918 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3S8X 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 94 A HIS 94 1_555 B ZN ZN . A ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
metalc ? metalc2 A NE2 HIS 96 A HIS 96 1_555 B ZN ZN . A ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc3 A ND1 HIS 119 A HIS 119 1_555 B ZN ZN . A ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc4 B ZN ZN . A ZN 262 1_555 F N22 E59 . A E59 266 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.933 ? 
metalc ? metalc5 B ZN ZN . A ZN 262 1_555 F N22 E59 . A E59 266 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.934 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 106 n n 
S C1 DMS sing 107 n n 
S C2 DMS sing 108 n n 
C1 H11 DMS sing 109 n n 
C1 H12 DMS sing 110 n n 
C1 H13 DMS sing 111 n n 
C2 H21 DMS sing 112 n n 
C2 H22 DMS sing 113 n n 
C2 H23 DMS sing 114 n n 
#
_atom_sites.entry_id                     3S8X 
_atom_sites.fract_transf_matrix[1][1]    0.023692 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006034 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024284 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014349 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 262 1 ZN ZN . 
C 3 DMS A 1 263 1 DMS DMS . 
D 3 DMS A 1 264 2 DMS DMS . 
E 4 BCN A 1 265 1 BCN BCN . 
F 5 E59 A 1 266 1 E59 E59 . 
G 6 HOH A 1 126 126 HOH HOH . 
G 6 HOH A 2 267 1 HOH HOH . 
G 6 HOH A 3 268 2 HOH HOH . 
G 6 HOH A 4 269 3 HOH HOH . 
G 6 HOH A 5 270 4 HOH HOH . 
G 6 HOH A 6 271 5 HOH HOH . 
G 6 HOH A 7 272 6 HOH HOH . 
G 6 HOH A 8 273 7 HOH HOH . 
G 6 HOH A 9 274 8 HOH HOH . 
G 6 HOH A 10 275 9 HOH HOH . 
G 6 HOH A 11 276 10 HOH HOH . 
G 6 HOH A 12 277 11 HOH HOH . 
G 6 HOH A 13 278 12 HOH HOH . 
G 6 HOH A 14 279 13 HOH HOH . 
G 6 HOH A 15 280 14 HOH HOH . 
G 6 HOH A 16 281 15 HOH HOH . 
G 6 HOH A 17 282 16 HOH HOH . 
G 6 HOH A 18 283 17 HOH HOH . 
G 6 HOH A 19 284 18 HOH HOH . 
G 6 HOH A 20 285 19 HOH HOH . 
G 6 HOH A 21 286 20 HOH HOH . 
G 6 HOH A 22 287 21 HOH HOH . 
G 6 HOH A 23 288 22 HOH HOH . 
G 6 HOH A 24 289 23 HOH HOH . 
G 6 HOH A 25 290 24 HOH HOH . 
G 6 HOH A 26 291 25 HOH HOH . 
G 6 HOH A 27 292 26 HOH HOH . 
G 6 HOH A 28 293 27 HOH HOH . 
G 6 HOH A 29 294 28 HOH HOH . 
G 6 HOH A 30 295 29 HOH HOH . 
G 6 HOH A 31 296 30 HOH HOH . 
G 6 HOH A 32 297 31 HOH HOH . 
G 6 HOH A 33 298 32 HOH HOH . 
G 6 HOH A 34 299 33 HOH HOH . 
G 6 HOH A 35 300 34 HOH HOH . 
G 6 HOH A 36 301 35 HOH HOH . 
G 6 HOH A 37 302 36 HOH HOH . 
G 6 HOH A 38 303 37 HOH HOH . 
G 6 HOH A 39 304 38 HOH HOH . 
G 6 HOH A 40 305 39 HOH HOH . 
G 6 HOH A 41 306 40 HOH HOH . 
G 6 HOH A 42 307 41 HOH HOH . 
G 6 HOH A 43 308 42 HOH HOH . 
G 6 HOH A 44 309 43 HOH HOH . 
G 6 HOH A 45 310 44 HOH HOH . 
G 6 HOH A 46 311 45 HOH HOH . 
G 6 HOH A 47 312 46 HOH HOH . 
G 6 HOH A 48 313 47 HOH HOH . 
G 6 HOH A 49 314 48 HOH HOH . 
G 6 HOH A 50 315 49 HOH HOH . 
G 6 HOH A 51 316 50 HOH HOH . 
G 6 HOH A 52 317 51 HOH HOH . 
G 6 HOH A 53 318 52 HOH HOH . 
G 6 HOH A 54 319 53 HOH HOH . 
G 6 HOH A 55 320 54 HOH HOH . 
G 6 HOH A 56 321 55 HOH HOH . 
G 6 HOH A 57 322 56 HOH HOH . 
G 6 HOH A 58 323 57 HOH HOH . 
G 6 HOH A 59 324 58 HOH HOH . 
G 6 HOH A 60 325 59 HOH HOH . 
G 6 HOH A 61 326 60 HOH HOH . 
G 6 HOH A 62 327 61 HOH HOH . 
G 6 HOH A 63 328 62 HOH HOH . 
G 6 HOH A 64 329 63 HOH HOH . 
G 6 HOH A 65 330 64 HOH HOH . 
G 6 HOH A 66 331 65 HOH HOH . 
G 6 HOH A 67 332 66 HOH HOH . 
G 6 HOH A 68 333 67 HOH HOH . 
G 6 HOH A 69 334 68 HOH HOH . 
G 6 HOH A 70 335 69 HOH HOH . 
G 6 HOH A 71 336 70 HOH HOH . 
G 6 HOH A 72 337 71 HOH HOH . 
G 6 HOH A 73 338 72 HOH HOH . 
G 6 HOH A 74 339 73 HOH HOH . 
G 6 HOH A 75 340 74 HOH HOH . 
G 6 HOH A 76 341 75 HOH HOH . 
G 6 HOH A 77 342 76 HOH HOH . 
G 6 HOH A 78 343 77 HOH HOH . 
G 6 HOH A 79 344 78 HOH HOH . 
G 6 HOH A 80 345 79 HOH HOH . 
G 6 HOH A 81 346 80 HOH HOH . 
G 6 HOH A 82 347 81 HOH HOH . 
G 6 HOH A 83 348 82 HOH HOH . 
G 6 HOH A 84 349 83 HOH HOH . 
G 6 HOH A 85 350 84 HOH HOH . 
G 6 HOH A 86 351 85 HOH HOH . 
G 6 HOH A 87 352 86 HOH HOH . 
G 6 HOH A 88 353 87 HOH HOH . 
G 6 HOH A 89 354 88 HOH HOH . 
G 6 HOH A 90 355 89 HOH HOH . 
G 6 HOH A 91 356 90 HOH HOH . 
G 6 HOH A 92 357 91 HOH HOH . 
G 6 HOH A 93 358 92 HOH HOH . 
G 6 HOH A 94 359 93 HOH HOH . 
G 6 HOH A 95 360 94 HOH HOH . 
G 6 HOH A 96 361 95 HOH HOH . 
G 6 HOH A 97 362 96 HOH HOH . 
G 6 HOH A 98 363 97 HOH HOH . 
G 6 HOH A 99 364 98 HOH HOH . 
G 6 HOH A 100 365 99 HOH HOH . 
G 6 HOH A 101 366 100 HOH HOH . 
G 6 HOH A 102 367 101 HOH HOH . 
G 6 HOH A 103 368 102 HOH HOH . 
G 6 HOH A 104 369 103 HOH HOH . 
G 6 HOH A 105 370 104 HOH HOH . 
G 6 HOH A 106 371 105 HOH HOH . 
G 6 HOH A 107 372 106 HOH HOH . 
G 6 HOH A 108 373 107 HOH HOH . 
G 6 HOH A 109 374 108 HOH HOH . 
G 6 HOH A 110 375 109 HOH HOH . 
G 6 HOH A 111 376 110 HOH HOH . 
G 6 HOH A 112 377 111 HOH HOH . 
G 6 HOH A 113 378 112 HOH HOH . 
G 6 HOH A 114 379 113 HOH HOH . 
G 6 HOH A 115 380 114 HOH HOH . 
G 6 HOH A 116 381 115 HOH HOH . 
G 6 HOH A 117 382 116 HOH HOH . 
G 6 HOH A 118 383 117 HOH HOH . 
G 6 HOH A 119 384 118 HOH HOH . 
G 6 HOH A 120 385 119 HOH HOH . 
G 6 HOH A 121 386 120 HOH HOH . 
G 6 HOH A 122 387 121 HOH HOH . 
G 6 HOH A 123 388 122 HOH HOH . 
G 6 HOH A 124 389 123 HOH HOH . 
G 6 HOH A 125 390 124 HOH HOH . 
G 6 HOH A 126 391 125 HOH HOH . 
G 6 HOH A 127 392 127 HOH HOH . 
G 6 HOH A 128 393 128 HOH HOH . 
G 6 HOH A 129 394 129 HOH HOH . 
G 6 HOH A 130 395 130 HOH HOH . 
G 6 HOH A 131 396 131 HOH HOH . 
G 6 HOH A 132 397 132 HOH HOH . 
G 6 HOH A 133 398 133 HOH HOH . 
G 6 HOH A 134 399 134 HOH HOH . 
G 6 HOH A 135 400 135 HOH HOH . 
G 6 HOH A 136 401 136 HOH HOH . 
G 6 HOH A 137 402 137 HOH HOH . 
G 6 HOH A 138 403 138 HOH HOH . 
G 6 HOH A 139 404 139 HOH HOH . 
G 6 HOH A 140 405 140 HOH HOH . 
G 6 HOH A 141 406 141 HOH HOH . 
G 6 HOH A 142 407 142 HOH HOH . 
G 6 HOH A 143 408 143 HOH HOH . 
G 6 HOH A 144 409 144 HOH HOH . 
G 6 HOH A 145 410 145 HOH HOH . 
G 6 HOH A 146 411 146 HOH HOH . 
G 6 HOH A 147 412 147 HOH HOH . 
G 6 HOH A 148 413 148 HOH HOH . 
G 6 HOH A 149 414 149 HOH HOH . 
G 6 HOH A 150 415 150 HOH HOH . 
G 6 HOH A 151 416 151 HOH HOH . 
G 6 HOH A 152 417 152 HOH HOH . 
G 6 HOH A 153 418 153 HOH HOH . 
G 6 HOH A 154 419 154 HOH HOH . 
G 6 HOH A 155 420 155 HOH HOH . 
G 6 HOH A 156 421 156 HOH HOH . 
G 6 HOH A 157 422 157 HOH HOH . 
G 6 HOH A 158 423 158 HOH HOH . 
G 6 HOH A 159 424 159 HOH HOH . 
G 6 HOH A 160 425 160 HOH HOH . 
G 6 HOH A 161 426 161 HOH HOH . 
G 6 HOH A 162 427 162 HOH HOH . 
G 6 HOH A 163 428 163 HOH HOH . 
G 6 HOH A 164 429 164 HOH HOH . 
G 6 HOH A 165 430 165 HOH HOH . 
G 6 HOH A 166 431 166 HOH HOH . 
G 6 HOH A 167 432 167 HOH HOH . 
G 6 HOH A 168 433 168 HOH HOH . 
G 6 HOH A 169 434 169 HOH HOH . 
G 6 HOH A 170 435 170 HOH HOH . 
G 6 HOH A 171 436 171 HOH HOH . 
G 6 HOH A 172 437 172 HOH HOH . 
G 6 HOH A 173 438 173 HOH HOH . 
G 6 HOH A 174 439 174 HOH HOH . 
G 6 HOH A 175 440 175 HOH HOH . 
G 6 HOH A 176 441 176 HOH HOH . 
G 6 HOH A 177 442 177 HOH HOH . 
G 6 HOH A 178 443 178 HOH HOH . 
G 6 HOH A 179 444 179 HOH HOH . 
G 6 HOH A 180 445 180 HOH HOH . 
G 6 HOH A 181 446 181 HOH HOH . 
G 6 HOH A 182 447 182 HOH HOH . 
G 6 HOH A 183 448 183 HOH HOH . 
G 6 HOH A 184 449 184 HOH HOH . 
G 6 HOH A 185 450 185 HOH HOH . 
G 6 HOH A 186 451 186 HOH HOH . 
G 6 HOH A 187 452 187 HOH HOH . 
G 6 HOH A 188 453 188 HOH HOH . 
G 6 HOH A 189 454 189 HOH HOH . 
G 6 HOH A 190 455 190 HOH HOH . 
G 6 HOH A 191 456 191 HOH HOH . 
G 6 HOH A 192 457 192 HOH HOH . 
G 6 HOH A 193 458 193 HOH HOH . 
G 6 HOH A 194 459 194 HOH HOH . 
G 6 HOH A 195 460 195 HOH HOH . 
G 6 HOH A 196 461 196 HOH HOH . 
G 6 HOH A 197 462 197 HOH HOH . 
G 6 HOH A 198 463 198 HOH HOH . 
G 6 HOH A 199 464 199 HOH HOH . 
G 6 HOH A 200 465 200 HOH HOH . 
G 6 HOH A 201 466 201 HOH HOH . 
G 6 HOH A 202 467 202 HOH HOH . 
G 6 HOH A 203 468 203 HOH HOH . 
G 6 HOH A 204 469 204 HOH HOH . 
G 6 HOH A 205 470 205 HOH HOH . 
G 6 HOH A 206 471 206 HOH HOH . 
G 6 HOH A 207 472 207 HOH HOH . 
G 6 HOH A 208 473 208 HOH HOH . 
G 6 HOH A 209 474 209 HOH HOH . 
G 6 HOH A 210 475 210 HOH HOH . 
G 6 HOH A 211 476 211 HOH HOH . 
G 6 HOH A 212 477 212 HOH HOH . 
G 6 HOH A 213 478 213 HOH HOH . 
G 6 HOH A 214 479 214 HOH HOH . 
G 6 HOH A 215 480 215 HOH HOH . 
G 6 HOH A 216 481 216 HOH HOH . 
G 6 HOH A 217 482 217 HOH HOH . 
G 6 HOH A 218 483 218 HOH HOH . 
G 6 HOH A 219 484 219 HOH HOH . 
G 6 HOH A 220 485 220 HOH HOH . 
G 6 HOH A 221 486 221 HOH HOH . 
G 6 HOH A 222 487 222 HOH HOH . 
G 6 HOH A 223 488 223 HOH HOH . 
G 6 HOH A 224 489 224 HOH HOH . 
G 6 HOH A 225 490 225 HOH HOH . 
G 6 HOH A 226 491 226 HOH HOH . 
G 6 HOH A 227 492 227 HOH HOH . 
G 6 HOH A 228 493 228 HOH HOH . 
G 6 HOH A 229 494 229 HOH HOH . 
G 6 HOH A 230 495 230 HOH HOH . 
G 6 HOH A 231 496 231 HOH HOH . 
G 6 HOH A 232 497 232 HOH HOH . 
G 6 HOH A 233 498 233 HOH HOH . 
G 6 HOH A 234 499 234 HOH HOH . 
G 6 HOH A 235 500 235 HOH HOH . 
G 6 HOH A 236 501 236 HOH HOH . 
G 6 HOH A 237 502 237 HOH HOH . 
G 6 HOH A 238 503 238 HOH HOH . 
G 6 HOH A 239 504 239 HOH HOH . 
G 6 HOH A 240 505 240 HOH HOH . 
G 6 HOH A 241 506 241 HOH HOH . 
G 6 HOH A 242 507 242 HOH HOH . 
G 6 HOH A 243 508 243 HOH HOH . 
G 6 HOH A 244 509 244 HOH HOH . 
G 6 HOH A 245 510 245 HOH HOH . 
G 6 HOH A 246 511 246 HOH HOH . 
G 6 HOH A 247 512 247 HOH HOH . 
G 6 HOH A 248 513 248 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 3 10.773 -0.894 13.98 1 29.21 ? S DMS 264 A 1 
HETATM 2 O O DMS . . . D 3 10.002 0.603 13.575 1 28.57 ? O DMS 264 A 1 
HETATM 3 C C1 DMS . . . D 3 11.477 -0.595 15.669 1 22.18 ? C1 DMS 264 A 1 
HETATM 4 C C2 DMS . . . D 3 9.861 -2.374 14.051 1 22.38 ? C2 DMS 264 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#