data_3S9F # _model_server_result.job_id V-Rvw9RiM43Kyu_1l6uU5w _model_server_result.datetime_utc '2024-12-15 23:51:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3s9f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":150}' # _entry.id 3S9F # _exptl.entry_id 3S9F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3S9F _cell.length_a 33.564 _cell.length_b 134.663 _cell.length_c 70.924 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3S9F _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -35.462 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 60 A CYS 40 1_555 A SG CYS 63 A CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? metalc ? metalc1 A O HIS 27 A HIS 7 1_555 E MG MG . A MG 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.654 ? metalc ? metalc2 A O LEU 132 A LEU 112 1_555 B MG MG . A MG 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.785 ? metalc ? metalc3 C MG MG . A MG 147 1_555 G O HOH . A HOH 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.976 ? metalc ? metalc4 E MG MG . A MG 149 1_555 G O HOH . A HOH 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.921 ? metalc ? metalc5 E MG MG . A MG 149 1_555 G O HOH . A HOH 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.89 ? metalc ? metalc6 F MG MG . A MG 150 1_555 G O HOH . A HOH 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc7 F MG MG . A MG 150 1_555 G O HOH . A HOH 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? metalc ? metalc8 F MG MG . A MG 150 1_555 G O HOH . A HOH 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? metalc ? metalc9 F MG MG . A MG 150 1_555 G O HOH . A HOH 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc10 F MG MG . A MG 150 1_555 G O HOH . A HOH 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? metalc ? metalc11 F MG MG . A MG 150 1_555 G O HOH . A HOH 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3S9F _atom_sites.fract_transf_matrix[1][1] 0.029794 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007426 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0141 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 146 1 MG MG . C 2 MG A 1 147 2 MG MG . D 2 MG A 1 148 3 MG MG . E 2 MG A 1 149 4 MG MG . F 2 MG A 1 150 5 MG MG . G 3 HOH A 1 151 1 HOH HOH . G 3 HOH A 2 152 2 HOH HOH . G 3 HOH A 3 153 3 HOH HOH . G 3 HOH A 4 154 4 HOH HOH . G 3 HOH A 5 155 5 HOH HOH . G 3 HOH A 6 156 6 HOH HOH . G 3 HOH A 7 157 7 HOH HOH . G 3 HOH A 8 158 8 HOH HOH . G 3 HOH A 9 159 9 HOH HOH . G 3 HOH A 10 160 10 HOH HOH . G 3 HOH A 11 161 11 HOH HOH . G 3 HOH A 12 162 12 HOH HOH . G 3 HOH A 13 163 13 HOH HOH . G 3 HOH A 14 164 14 HOH HOH . G 3 HOH A 15 165 15 HOH HOH . G 3 HOH A 16 166 16 HOH HOH . G 3 HOH A 17 167 17 HOH HOH . G 3 HOH A 18 168 18 HOH HOH . G 3 HOH A 19 169 19 HOH HOH . G 3 HOH A 20 170 20 HOH HOH . G 3 HOH A 21 171 21 HOH HOH . G 3 HOH A 22 172 22 HOH HOH . G 3 HOH A 23 173 23 HOH HOH . G 3 HOH A 24 174 24 HOH HOH . G 3 HOH A 25 175 25 HOH HOH . G 3 HOH A 26 176 26 HOH HOH . G 3 HOH A 27 177 27 HOH HOH . G 3 HOH A 28 178 28 HOH HOH . G 3 HOH A 29 179 29 HOH HOH . G 3 HOH A 30 180 30 HOH HOH . G 3 HOH A 31 181 31 HOH HOH . G 3 HOH A 32 182 32 HOH HOH . G 3 HOH A 33 183 33 HOH HOH . G 3 HOH A 34 184 34 HOH HOH . G 3 HOH A 35 185 35 HOH HOH . G 3 HOH A 36 186 36 HOH HOH . G 3 HOH A 37 187 37 HOH HOH . G 3 HOH A 38 188 38 HOH HOH . G 3 HOH A 39 189 39 HOH HOH . G 3 HOH A 40 190 40 HOH HOH . G 3 HOH A 41 191 41 HOH HOH . G 3 HOH A 42 192 42 HOH HOH . G 3 HOH A 43 193 43 HOH HOH . G 3 HOH A 44 194 44 HOH HOH . G 3 HOH A 45 195 45 HOH HOH . G 3 HOH A 46 196 46 HOH HOH . G 3 HOH A 47 197 47 HOH HOH . G 3 HOH A 48 198 48 HOH HOH . G 3 HOH A 49 199 49 HOH HOH . G 3 HOH A 50 200 50 HOH HOH . G 3 HOH A 51 201 51 HOH HOH . G 3 HOH A 52 202 52 HOH HOH . G 3 HOH A 53 203 53 HOH HOH . G 3 HOH A 54 204 54 HOH HOH . G 3 HOH A 55 205 55 HOH HOH . G 3 HOH A 56 206 56 HOH HOH . G 3 HOH A 57 207 58 HOH HOH . G 3 HOH A 58 208 59 HOH HOH . G 3 HOH A 59 209 60 HOH HOH . G 3 HOH A 60 210 61 HOH HOH . G 3 HOH A 61 211 62 HOH HOH . G 3 HOH A 62 212 63 HOH HOH . G 3 HOH A 63 213 64 HOH HOH . G 3 HOH A 64 214 65 HOH HOH . G 3 HOH A 65 215 66 HOH HOH . G 3 HOH A 66 216 67 HOH HOH . G 3 HOH A 67 217 68 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 14.073 _atom_site.Cartn_y 15.364 _atom_site.Cartn_z -0.222 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 33.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 150 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #