data_3SA1
#
_model_server_result.job_id            jRGSvlLLBO7V_BBFIzuMFQ 
_model_server_result.datetime_utc      '2024-11-18 15:00:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3sa1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":163}' 
#
_entry.id    3SA1 
#
_exptl.entry_id    3SA1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              359.424 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            6-ethyl-5-{3-[2-methoxy-5-(pyridin-4-yl)phenyl]prop-1-yn-1-yl}pyrimidine-2,4-diamine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3SA1 
_cell.length_a            78.094 
_cell.length_b            78.094 
_cell.length_c            67.07 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3SA1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        77 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 42' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
_chem_comp.formula           'C21 H21 N5 O' 
_chem_comp.formula_weight    359.424 
_chem_comp.id                6DR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              6-ethyl-5-{3-[2-methoxy-5-(pyridin-4-yl)phenyl]prop-1-yn-1-yl}pyrimidine-2,4-diamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 N1 6DR doub 1 n y 
C6 N1 6DR sing 2 n y 
N3 C2 6DR sing 3 n y 
C2 NAC 6DR sing 4 n n 
C4 N3 6DR doub 5 n y 
CAN C4 6DR sing 6 n n 
C4 C5 6DR sing 7 n y 
CAF C5 6DR sing 8 n n 
C5 C6 6DR doub 9 n y 
C6 NAD 6DR sing 10 n n 
CAA CAN 6DR sing 11 n n 
CAA HAA 6DR sing 12 n n 
CAA HAAA 6DR sing 13 n n 
CAA HAAB 6DR sing 14 n n 
OAS CAB 6DR sing 15 n n 
CAB HAB 6DR sing 16 n n 
CAB HABA 6DR sing 17 n n 
CAB HABB 6DR sing 18 n n 
NAC HNAC 6DR sing 19 n n 
NAC HNAA 6DR sing 20 n n 
NAD HNAD 6DR sing 21 n n 
NAD HNAB 6DR sing 22 n n 
CAO CAE 6DR sing 23 n n 
CAE CAF 6DR trip 24 n n 
CAI CAG 6DR doub 25 n y 
CAG NAP 6DR sing 26 n y 
CAG HAG 6DR sing 27 n n 
NAP CAH 6DR doub 28 n y 
CAJ CAH 6DR sing 29 n y 
CAH HAH 6DR sing 30 n n 
CAI CAV 6DR sing 31 n y 
CAI HAI 6DR sing 32 n n 
CAV CAJ 6DR doub 33 n y 
CAJ HAJ 6DR sing 34 n n 
CAL CAK 6DR doub 35 n y 
CAK CAW 6DR sing 36 n y 
CAK HAK 6DR sing 37 n n 
CAL CAZ 6DR sing 38 n y 
CAL HAL 6DR sing 39 n n 
CAW CAM 6DR doub 40 n y 
CAX CAM 6DR sing 41 n y 
CAM HAM 6DR sing 42 n n 
CAN HAN 6DR sing 43 n n 
CAN HANA 6DR sing 44 n n 
CAX CAO 6DR sing 45 n n 
CAO HAO 6DR sing 46 n n 
CAO HAOA 6DR sing 47 n n 
OAS CAZ 6DR sing 48 n n 
CAW CAV 6DR sing 49 n n 
CAZ CAX 6DR doub 50 n y 
#
_atom_sites.entry_id                     3SA1 
_atom_sites.fract_transf_matrix[1][1]    0.012805 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012805 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01491 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAP A 1 207 207 NAP NAP . 
D 3 6DR A 1 163 1 6DR DRG . 
E 2 NAP B 1 207 207 NAP NAP . 
F 3 6DR B 1 163 1 6DR DRG . 
G 4 HOH A 1 164 3 HOH HOH . 
G 4 HOH A 2 165 4 HOH HOH . 
G 4 HOH A 3 166 5 HOH HOH . 
G 4 HOH A 4 167 8 HOH HOH . 
G 4 HOH A 5 168 9 HOH HOH . 
G 4 HOH A 6 169 11 HOH HOH . 
G 4 HOH A 7 170 14 HOH HOH . 
G 4 HOH A 8 171 15 HOH HOH . 
G 4 HOH A 9 172 16 HOH HOH . 
G 4 HOH A 10 173 19 HOH HOH . 
G 4 HOH A 11 174 20 HOH HOH . 
G 4 HOH A 12 175 22 HOH HOH . 
G 4 HOH A 13 176 23 HOH HOH . 
G 4 HOH A 14 177 24 HOH HOH . 
G 4 HOH A 15 178 28 HOH HOH . 
G 4 HOH A 16 179 33 HOH HOH . 
G 4 HOH A 17 180 37 HOH HOH . 
H 4 HOH B 1 164 1 HOH HOH . 
H 4 HOH B 2 165 2 HOH HOH . 
H 4 HOH B 3 166 6 HOH HOH . 
H 4 HOH B 4 167 7 HOH HOH . 
H 4 HOH B 5 168 12 HOH HOH . 
H 4 HOH B 6 169 13 HOH HOH . 
H 4 HOH B 7 170 18 HOH HOH . 
H 4 HOH B 8 171 21 HOH HOH . 
H 4 HOH B 9 172 25 HOH HOH . 
H 4 HOH B 10 173 26 HOH HOH . 
H 4 HOH B 11 174 27 HOH HOH . 
H 4 HOH B 12 175 30 HOH HOH . 
H 4 HOH B 13 176 31 HOH HOH . 
H 4 HOH B 14 177 32 HOH HOH . 
H 4 HOH B 15 178 35 HOH HOH . 
H 4 HOH B 16 179 36 HOH HOH . 
H 4 HOH B 17 180 38 HOH HOH . 
H 4 HOH B 18 181 39 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 6DR . . . D 3 22.268 42.488 -1.159 1 29.06 ? N1 6DR 163 A 1 
HETATM 2 C C2 6DR . . . D 3 21.512 41.952 -2.133 1 28.47 ? C2 6DR 163 A 1 
HETATM 3 N N3 6DR . . . D 3 21.944 41.943 -3.396 1 29.49 ? N3 6DR 163 A 1 
HETATM 4 C C4 6DR . . . D 3 23.131 42.456 -3.756 1 29.37 ? C4 6DR 163 A 1 
HETATM 5 C C5 6DR . . . D 3 23.935 43.016 -2.758 1 29.33 ? C5 6DR 163 A 1 
HETATM 6 C C6 6DR . . . D 3 23.476 43.026 -1.432 1 29 ? C6 6DR 163 A 1 
HETATM 7 C CAA 6DR . . . D 3 23.036 43.599 -6.033 1 28.29 ? CAA 6DR 163 A 1 
HETATM 8 C CAB 6DR . . . D 3 30.329 45.21 -7.188 1 33.25 ? CAB 6DR 163 A 1 
HETATM 9 N NAC 6DR . . . D 3 20.326 41.419 -1.871 1 27.69 ? NAC 6DR 163 A 1 
HETATM 10 N NAD 6DR . . . D 3 24.214 43.556 -0.448 1 25.78 ? NAD 6DR 163 A 1 
HETATM 11 C CAE 6DR . . . D 3 26.286 44.044 -3.468 1 30.9 ? CAE 6DR 163 A 1 
HETATM 12 C CAF 6DR . . . D 3 25.205 43.574 -3.118 1 29.67 ? CAF 6DR 163 A 1 
HETATM 13 C CAG 6DR . . . D 3 23.914 50.384 -6.796 1 37.12 ? CAG 6DR 163 A 1 
HETATM 14 C CAH 6DR . . . D 3 22.981 49.265 -5 1 36.78 ? CAH 6DR 163 A 1 
HETATM 15 C CAI 6DR . . . D 3 24.97 49.468 -6.858 1 36.02 ? CAI 6DR 163 A 1 
HETATM 16 C CAJ 6DR . . . D 3 24.007 48.313 -5.011 1 35.67 ? CAJ 6DR 163 A 1 
HETATM 17 C CAK 6DR . . . D 3 26.937 47.483 -7.12 1 32.14 ? CAK 6DR 163 A 1 
HETATM 18 C CAL 6DR . . . D 3 27.99 46.583 -7.209 1 32.77 ? CAL 6DR 163 A 1 
HETATM 19 C CAM 6DR . . . D 3 26.333 46.528 -4.992 1 32.32 ? CAM 6DR 163 A 1 
HETATM 20 C CAN 6DR . . . D 3 23.494 42.364 -5.252 1 28.94 ? CAN 6DR 163 A 1 
HETATM 21 C CAO 6DR . . . D 3 27.575 44.605 -3.896 1 30.97 ? CAO 6DR 163 A 1 
HETATM 22 N NAP 6DR . . . D 3 22.964 50.266 -5.876 1 37.58 ? NAP 6DR 163 A 1 
HETATM 23 O OAS 6DR . . . D 3 29.274 44.758 -6.316 1 33.75 ? OAS 6DR 163 A 1 
HETATM 24 C CAV 6DR . . . D 3 25.036 48.406 -5.947 1 34.61 ? CAV 6DR 163 A 1 
HETATM 25 C CAW 6DR . . . D 3 26.094 47.473 -6.006 1 33.5 ? CAW 6DR 163 A 1 
HETATM 26 C CAX 6DR . . . D 3 27.39 45.604 -5.066 1 31.38 ? CAX 6DR 163 A 1 
HETATM 27 C CAZ 6DR . . . D 3 28.229 45.649 -6.191 1 32.85 ? CAZ 6DR 163 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           27 
#