data_3SA2 # _model_server_result.job_id W22gsKBXAmvf9nQcIrYETA _model_server_result.datetime_utc '2024-11-29 03:20:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3sa2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":207}' # _entry.id 3SA2 # _exptl.entry_id 3SA2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 743.405 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3SA2 _cell.length_a 78.265 _cell.length_b 78.265 _cell.length_c 66.997 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SA2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 77 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C21 H28 N7 O17 P3' _chem_comp.formula_weight 743.405 _chem_comp.id NAP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAP doub 288 n n PA O2A NAP sing 289 n n PA O5B NAP sing 290 n n PA O3 NAP sing 291 n n O2A HOA2 NAP sing 292 n n O5B C5B NAP sing 293 n n C5B C4B NAP sing 294 n n C5B H51A NAP sing 295 n n C5B H52A NAP sing 296 n n C4B O4B NAP sing 297 n n C4B C3B NAP sing 298 n n C4B H4B NAP sing 299 n n O4B C1B NAP sing 300 n n C3B O3B NAP sing 301 n n C3B C2B NAP sing 302 n n C3B H3B NAP sing 303 n n O3B HO3A NAP sing 304 n n C2B O2B NAP sing 305 n n C2B C1B NAP sing 306 n n C2B H2B NAP sing 307 n n O2B P2B NAP sing 308 n n C1B N9A NAP sing 309 n n C1B H1B NAP sing 310 n n N9A C8A NAP sing 311 n y N9A C4A NAP sing 312 n y C8A N7A NAP doub 313 n y C8A H8A NAP sing 314 n n N7A C5A NAP sing 315 n y C5A C6A NAP sing 316 n y C5A C4A NAP doub 317 n y C6A N6A NAP sing 318 n n C6A N1A NAP doub 319 n y N6A H61A NAP sing 320 n n N6A H62A NAP sing 321 n n N1A C2A NAP sing 322 n y C2A N3A NAP doub 323 n y C2A H2A NAP sing 324 n n N3A C4A NAP sing 325 n y O3 PN NAP sing 326 n n PN O1N NAP doub 327 n n PN O2N NAP sing 328 n n PN O5D NAP sing 329 n n O5D C5D NAP sing 330 n n C5D C4D NAP sing 331 n n C5D H51N NAP sing 332 n n C5D H52N NAP sing 333 n n C4D O4D NAP sing 334 n n C4D C3D NAP sing 335 n n C4D H4D NAP sing 336 n n O4D C1D NAP sing 337 n n C3D O3D NAP sing 338 n n C3D C2D NAP sing 339 n n C3D H3D NAP sing 340 n n O3D HO3N NAP sing 341 n n C2D O2D NAP sing 342 n n C2D C1D NAP sing 343 n n C2D H2D NAP sing 344 n n O2D HO2N NAP sing 345 n n C1D N1N NAP sing 346 n n C1D H1D NAP sing 347 n n N1N C2N NAP sing 348 n y N1N C6N NAP doub 349 n y C2N C3N NAP doub 350 n y C2N H2N NAP sing 351 n n C3N C7N NAP sing 352 n n C3N C4N NAP sing 353 n y C7N O7N NAP doub 354 n n C7N N7N NAP sing 355 n n N7N H71N NAP sing 356 n n N7N H72N NAP sing 357 n n C4N C5N NAP doub 358 n y C4N H4N NAP sing 359 n n C5N C6N NAP sing 360 n y C5N H5N NAP sing 361 n n C6N H6N NAP sing 362 n n P2B O1X NAP doub 363 n n P2B O2X NAP sing 364 n n P2B O3X NAP sing 365 n n O2X HOP2 NAP sing 366 n n O3X HOP3 NAP sing 367 n n # _atom_sites.entry_id 3SA2 _atom_sites.fract_transf_matrix[1][1] 0.012777 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012777 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014926 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 207 207 NAP NAP . D 3 7DR A 1 163 1 7DR DRG . E 2 NAP B 1 207 207 NAP NAP . F 3 7DR B 1 163 1 7DR DRG . G 4 HOH A 1 164 1 HOH HOH . G 4 HOH A 2 165 2 HOH HOH . G 4 HOH A 3 166 3 HOH HOH . G 4 HOH A 4 167 4 HOH HOH . G 4 HOH A 5 168 7 HOH HOH . G 4 HOH A 6 169 14 HOH HOH . G 4 HOH A 7 170 15 HOH HOH . G 4 HOH A 8 171 16 HOH HOH . G 4 HOH A 9 172 18 HOH HOH . G 4 HOH A 10 173 20 HOH HOH . G 4 HOH A 11 174 21 HOH HOH . G 4 HOH A 12 175 24 HOH HOH . G 4 HOH A 13 176 25 HOH HOH . G 4 HOH A 14 177 26 HOH HOH . G 4 HOH A 15 178 30 HOH HOH . G 4 HOH A 16 179 32 HOH HOH . G 4 HOH A 17 180 33 HOH HOH . G 4 HOH A 18 181 34 HOH HOH . G 4 HOH A 19 182 36 HOH HOH . G 4 HOH A 20 183 40 HOH HOH . G 4 HOH A 21 184 43 HOH HOH . G 4 HOH A 22 185 45 HOH HOH . G 4 HOH A 23 186 47 HOH HOH . G 4 HOH A 24 187 48 HOH HOH . G 4 HOH A 25 188 50 HOH HOH . G 4 HOH A 26 189 52 HOH HOH . G 4 HOH A 27 190 54 HOH HOH . G 4 HOH A 28 191 55 HOH HOH . G 4 HOH A 29 192 57 HOH HOH . G 4 HOH A 30 193 60 HOH HOH . G 4 HOH A 31 194 64 HOH HOH . G 4 HOH A 32 195 65 HOH HOH . G 4 HOH A 33 196 68 HOH HOH . G 4 HOH A 34 197 69 HOH HOH . G 4 HOH A 35 198 72 HOH HOH . G 4 HOH A 36 199 75 HOH HOH . G 4 HOH A 37 200 77 HOH HOH . G 4 HOH A 38 201 79 HOH HOH . G 4 HOH A 39 202 80 HOH HOH . G 4 HOH A 40 203 87 HOH HOH . G 4 HOH A 41 204 88 HOH HOH . G 4 HOH A 42 205 93 HOH HOH . G 4 HOH A 43 206 95 HOH HOH . G 4 HOH A 44 208 96 HOH HOH . G 4 HOH A 45 209 102 HOH HOH . G 4 HOH A 46 210 104 HOH HOH . G 4 HOH A 47 211 105 HOH HOH . G 4 HOH A 48 212 108 HOH HOH . G 4 HOH A 49 213 111 HOH HOH . G 4 HOH A 50 214 112 HOH HOH . G 4 HOH A 51 215 113 HOH HOH . G 4 HOH A 52 216 115 HOH HOH . G 4 HOH A 53 217 116 HOH HOH . G 4 HOH A 54 218 120 HOH HOH . G 4 HOH A 55 219 121 HOH HOH . G 4 HOH A 56 220 122 HOH HOH . G 4 HOH A 57 221 124 HOH HOH . H 4 HOH B 1 164 5 HOH HOH . H 4 HOH B 2 165 6 HOH HOH . H 4 HOH B 3 166 8 HOH HOH . H 4 HOH B 4 167 9 HOH HOH . H 4 HOH B 5 168 10 HOH HOH . H 4 HOH B 6 169 11 HOH HOH . H 4 HOH B 7 170 12 HOH HOH . H 4 HOH B 8 171 13 HOH HOH . H 4 HOH B 9 172 17 HOH HOH . H 4 HOH B 10 173 19 HOH HOH . H 4 HOH B 11 174 27 HOH HOH . H 4 HOH B 12 175 28 HOH HOH . H 4 HOH B 13 176 29 HOH HOH . H 4 HOH B 14 177 31 HOH HOH . H 4 HOH B 15 178 35 HOH HOH . H 4 HOH B 16 179 37 HOH HOH . H 4 HOH B 17 180 38 HOH HOH . H 4 HOH B 18 181 39 HOH HOH . H 4 HOH B 19 182 41 HOH HOH . H 4 HOH B 20 183 42 HOH HOH . H 4 HOH B 21 184 44 HOH HOH . H 4 HOH B 22 185 46 HOH HOH . H 4 HOH B 23 186 49 HOH HOH . H 4 HOH B 24 187 51 HOH HOH . H 4 HOH B 25 188 53 HOH HOH . H 4 HOH B 26 189 56 HOH HOH . H 4 HOH B 27 190 59 HOH HOH . H 4 HOH B 28 191 61 HOH HOH . H 4 HOH B 29 192 63 HOH HOH . H 4 HOH B 30 193 66 HOH HOH . H 4 HOH B 31 194 67 HOH HOH . H 4 HOH B 32 195 70 HOH HOH . H 4 HOH B 33 196 71 HOH HOH . H 4 HOH B 34 197 73 HOH HOH . H 4 HOH B 35 198 74 HOH HOH . H 4 HOH B 36 199 76 HOH HOH . H 4 HOH B 37 200 78 HOH HOH . H 4 HOH B 38 201 81 HOH HOH . H 4 HOH B 39 202 83 HOH HOH . H 4 HOH B 40 203 84 HOH HOH . H 4 HOH B 41 204 86 HOH HOH . H 4 HOH B 42 205 89 HOH HOH . H 4 HOH B 43 206 90 HOH HOH . H 4 HOH B 44 208 91 HOH HOH . H 4 HOH B 45 209 92 HOH HOH . H 4 HOH B 46 210 94 HOH HOH . H 4 HOH B 47 211 97 HOH HOH . H 4 HOH B 48 212 98 HOH HOH . H 4 HOH B 49 213 100 HOH HOH . H 4 HOH B 50 214 101 HOH HOH . H 4 HOH B 51 215 103 HOH HOH . H 4 HOH B 52 216 106 HOH HOH . H 4 HOH B 53 217 107 HOH HOH . H 4 HOH B 54 218 109 HOH HOH . H 4 HOH B 55 219 110 HOH HOH . H 4 HOH B 56 220 114 HOH HOH . H 4 HOH B 57 221 119 HOH HOH . H 4 HOH B 58 222 123 HOH HOH . H 4 HOH B 59 223 126 HOH HOH . H 4 HOH B 60 224 127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAP . . . C 2 43.115 34.38 -3.038 1 16.74 ? PA NAP 207 A 1 HETATM 2 O O1A NAP . . . C 2 42.452 33.776 -4.209 1 16.43 ? O1A NAP 207 A 1 HETATM 3 O O2A NAP . . . C 2 43.892 33.428 -2.233 1 17.22 ? O2A NAP 207 A 1 HETATM 4 O O5B NAP . . . C 2 44.113 35.553 -3.498 1 17.87 ? O5B NAP 207 A 1 HETATM 5 C C5B NAP . . . C 2 43.599 36.625 -4.259 1 17.35 ? C5B NAP 207 A 1 HETATM 6 C C4B NAP . . . C 2 44.785 37.297 -4.916 1 18.22 ? C4B NAP 207 A 1 HETATM 7 O O4B NAP . . . C 2 45.288 36.459 -5.935 1 18.44 ? O4B NAP 207 A 1 HETATM 8 C C3B NAP . . . C 2 44.483 38.621 -5.606 1 18.83 ? C3B NAP 207 A 1 HETATM 9 O O3B NAP . . . C 2 44.416 39.706 -4.716 1 18.32 ? O3B NAP 207 A 1 HETATM 10 C C2B NAP . . . C 2 45.687 38.715 -6.521 1 19.83 ? C2B NAP 207 A 1 HETATM 11 O O2B NAP . . . C 2 46.837 39.124 -5.805 1 19.91 ? O2B NAP 207 A 1 HETATM 12 C C1B NAP . . . C 2 45.85 37.258 -6.953 1 19.79 ? C1B NAP 207 A 1 HETATM 13 N N9A NAP . . . C 2 45.124 37.081 -8.228 1 20.64 ? N9A NAP 207 A 1 HETATM 14 C C8A NAP . . . C 2 43.778 36.919 -8.422 1 19.46 ? C8A NAP 207 A 1 HETATM 15 N N7A NAP . . . C 2 43.546 36.816 -9.748 1 19.69 ? N7A NAP 207 A 1 HETATM 16 C C5A NAP . . . C 2 44.717 36.915 -10.411 1 21.22 ? C5A NAP 207 A 1 HETATM 17 C C6A NAP . . . C 2 45.061 36.879 -11.76 1 22.25 ? C6A NAP 207 A 1 HETATM 18 N N6A NAP . . . C 2 44.136 36.716 -12.709 1 21.91 ? N6A NAP 207 A 1 HETATM 19 N N1A NAP . . . C 2 46.391 36.998 -12.12 1 22.74 ? N1A NAP 207 A 1 HETATM 20 C C2A NAP . . . C 2 47.37 37.157 -11.168 1 22.13 ? C2A NAP 207 A 1 HETATM 21 N N3A NAP . . . C 2 47.02 37.195 -9.838 1 22.27 ? N3A NAP 207 A 1 HETATM 22 C C4A NAP . . . C 2 45.719 37.083 -9.465 1 21.82 ? C4A NAP 207 A 1 HETATM 23 O O3 NAP . . . C 2 42.028 35.214 -2.206 1 18.26 ? O3 NAP 207 A 1 HETATM 24 P PN NAP . . . C 2 40.499 34.955 -1.83 1 19.36 ? PN NAP 207 A 1 HETATM 25 O O1N NAP . . . C 2 40.021 36.124 -1.049 1 18.63 ? O1N NAP 207 A 1 HETATM 26 O O2N NAP . . . C 2 39.768 34.529 -3.045 1 18.85 ? O2N NAP 207 A 1 HETATM 27 O O5D NAP . . . C 2 40.628 33.662 -0.867 1 19.03 ? O5D NAP 207 A 1 HETATM 28 C C5D NAP . . . C 2 41.128 33.809 0.436 1 19.27 ? C5D NAP 207 A 1 HETATM 29 C C4D NAP . . . C 2 40.139 33.198 1.417 1 19.92 ? C4D NAP 207 A 1 HETATM 30 O O4D NAP . . . C 2 39.897 31.821 1.127 1 19.57 ? O4D NAP 207 A 1 HETATM 31 C C3D NAP . . . C 2 40.717 33.262 2.817 1 19.88 ? C3D NAP 207 A 1 HETATM 32 O O3D NAP . . . C 2 39.623 33.378 3.698 1 21.54 ? O3D NAP 207 A 1 HETATM 33 C C2D NAP . . . C 2 41.345 31.889 2.973 1 20.29 ? C2D NAP 207 A 1 HETATM 34 O O2D NAP . . . C 2 41.482 31.491 4.316 1 22.04 ? O2D NAP 207 A 1 HETATM 35 C C1D NAP . . . C 2 40.337 31.032 2.232 1 19.26 ? C1D NAP 207 A 1 HETATM 36 N N1N NAP . . . C 2 40.883 29.75 1.788 1 19.16 ? N1N NAP 207 A 1 HETATM 37 C C2N NAP . . . C 2 40.237 28.613 2.206 1 18.23 ? C2N NAP 207 A 1 HETATM 38 C C3N NAP . . . C 2 40.684 27.36 1.799 1 19.41 ? C3N NAP 207 A 1 HETATM 39 C C7N NAP . . . C 2 39.905 26.124 2.163 1 19.66 ? C7N NAP 207 A 1 HETATM 40 O O7N NAP . . . C 2 40.266 24.898 1.585 1 20.81 ? O7N NAP 207 A 1 HETATM 41 N N7N NAP . . . C 2 38.886 26.189 3.018 1 19.71 ? N7N NAP 207 A 1 HETATM 42 C C4N NAP . . . C 2 41.794 27.277 0.956 1 18.66 ? C4N NAP 207 A 1 HETATM 43 C C5N NAP . . . C 2 42.438 28.444 0.536 1 18.44 ? C5N NAP 207 A 1 HETATM 44 C C6N NAP . . . C 2 41.973 29.687 0.954 1 18.43 ? C6N NAP 207 A 1 HETATM 45 P P2B NAP . . . C 2 47.348 40.657 -5.708 1 22.37 ? P2B NAP 207 A 1 HETATM 46 O O1X NAP . . . C 2 46.249 41.456 -5.046 1 21.78 ? O1X NAP 207 A 1 HETATM 47 O O2X NAP . . . C 2 48.6 40.729 -4.878 1 19.67 ? O2X NAP 207 A 1 HETATM 48 O O3X NAP . . . C 2 47.59 41.24 -7.083 1 21.37 ? O3X NAP 207 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 48 #