data_3SAO # _model_server_result.job_id CEbg-CcvZ0wlJldKF2dKdA _model_server_result.datetime_utc '2024-11-24 21:26:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3sao # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":164}' # _entry.id 3SAO # _exptl.entry_id 3SAO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3SAO _cell.length_a 37.95 _cell.length_b 68.89 _cell.length_c 117.4 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SAO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,H 1 1 B,D,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 58 A CYS 58 1_555 A SG CYS 151 A CYS 151 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.015 ? disulf ? disulf2 A SG CYS 58 A CYS 58 1_555 A SG CYS 151 A CYS 151 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 B SG CYS 58 B CYS 58 1_555 B SG CYS 151 B CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 E O3 DBH . B DBH 162 1_555 F FE FE . B FE 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc2 E O6 DBH . B DBH 162 1_555 F FE FE . B FE 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 146 n n C1 C2 GOL sing 147 n n C1 H11 GOL sing 148 n n C1 H12 GOL sing 149 n n O1 HO1 GOL sing 150 n n C2 O2 GOL sing 151 n n C2 C3 GOL sing 152 n n C2 H2 GOL sing 153 n n O2 HO2 GOL sing 154 n n C3 O3 GOL sing 155 n n C3 H31 GOL sing 156 n n C3 H32 GOL sing 157 n n O3 HO3 GOL sing 158 n n # _atom_sites.entry_id 3SAO _atom_sites.fract_transf_matrix[1][1] 0.02635 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014516 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008518 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NKN A 1 161 1 NKN NKN . D 2 NKN B 1 161 1 NKN NKN . E 3 DBH B 1 162 1 DBH DBH . F 4 FE B 1 163 1 FE FE . G 5 GOL B 1 164 1 GOL GOL . H 6 HOH A 1 162 3 HOH HOH . H 6 HOH A 2 163 6 HOH HOH . H 6 HOH A 3 164 7 HOH HOH . H 6 HOH A 4 165 11 HOH HOH . H 6 HOH A 5 166 13 HOH HOH . H 6 HOH A 6 167 14 HOH HOH . H 6 HOH A 7 168 16 HOH HOH . H 6 HOH A 8 169 19 HOH HOH . H 6 HOH A 9 170 20 HOH HOH . H 6 HOH A 10 171 21 HOH HOH . H 6 HOH A 11 172 22 HOH HOH . H 6 HOH A 12 173 27 HOH HOH . H 6 HOH A 13 174 28 HOH HOH . H 6 HOH A 14 175 29 HOH HOH . H 6 HOH A 15 176 30 HOH HOH . H 6 HOH A 16 177 32 HOH HOH . H 6 HOH A 17 178 34 HOH HOH . H 6 HOH A 18 179 36 HOH HOH . H 6 HOH A 19 180 39 HOH HOH . H 6 HOH A 20 181 40 HOH HOH . H 6 HOH A 21 182 42 HOH HOH . H 6 HOH A 22 183 53 HOH HOH . H 6 HOH A 23 184 54 HOH HOH . H 6 HOH A 24 185 55 HOH HOH . H 6 HOH A 25 186 61 HOH HOH . H 6 HOH A 26 187 64 HOH HOH . H 6 HOH A 27 188 65 HOH HOH . H 6 HOH A 28 189 66 HOH HOH . H 6 HOH A 29 190 67 HOH HOH . H 6 HOH A 30 191 68 HOH HOH . H 6 HOH A 31 192 78 HOH HOH . H 6 HOH A 32 193 80 HOH HOH . H 6 HOH A 33 194 81 HOH HOH . H 6 HOH A 34 195 82 HOH HOH . H 6 HOH A 35 196 83 HOH HOH . H 6 HOH A 36 197 84 HOH HOH . H 6 HOH A 37 198 85 HOH HOH . H 6 HOH A 38 199 88 HOH HOH . H 6 HOH A 39 200 91 HOH HOH . H 6 HOH A 40 201 92 HOH HOH . H 6 HOH A 41 202 93 HOH HOH . H 6 HOH A 42 203 94 HOH HOH . H 6 HOH A 43 204 95 HOH HOH . H 6 HOH A 44 205 96 HOH HOH . H 6 HOH A 45 206 98 HOH HOH . H 6 HOH A 46 207 99 HOH HOH . H 6 HOH A 47 208 100 HOH HOH . H 6 HOH A 48 209 102 HOH HOH . H 6 HOH A 49 210 104 HOH HOH . H 6 HOH A 50 211 105 HOH HOH . H 6 HOH A 51 212 106 HOH HOH . H 6 HOH A 52 213 110 HOH HOH . H 6 HOH A 53 214 111 HOH HOH . H 6 HOH A 54 215 112 HOH HOH . H 6 HOH A 55 216 118 HOH HOH . H 6 HOH A 56 217 119 HOH HOH . H 6 HOH A 57 218 120 HOH HOH . H 6 HOH A 58 219 123 HOH HOH . H 6 HOH A 59 220 124 HOH HOH . H 6 HOH A 60 221 126 HOH HOH . H 6 HOH A 61 222 127 HOH HOH . H 6 HOH A 62 223 129 HOH HOH . H 6 HOH A 63 224 131 HOH HOH . H 6 HOH A 64 225 133 HOH HOH . I 6 HOH B 1 165 1 HOH HOH . I 6 HOH B 2 166 2 HOH HOH . I 6 HOH B 3 167 4 HOH HOH . I 6 HOH B 4 168 5 HOH HOH . I 6 HOH B 5 169 8 HOH HOH . I 6 HOH B 6 170 9 HOH HOH . I 6 HOH B 7 171 10 HOH HOH . I 6 HOH B 8 172 12 HOH HOH . I 6 HOH B 9 173 15 HOH HOH . I 6 HOH B 10 174 17 HOH HOH . I 6 HOH B 11 175 18 HOH HOH . I 6 HOH B 12 176 23 HOH HOH . I 6 HOH B 13 177 24 HOH HOH . I 6 HOH B 14 178 25 HOH HOH . I 6 HOH B 15 179 26 HOH HOH . I 6 HOH B 16 180 31 HOH HOH . I 6 HOH B 17 181 33 HOH HOH . I 6 HOH B 18 182 35 HOH HOH . I 6 HOH B 19 183 37 HOH HOH . I 6 HOH B 20 184 38 HOH HOH . I 6 HOH B 21 185 41 HOH HOH . I 6 HOH B 22 186 43 HOH HOH . I 6 HOH B 23 187 44 HOH HOH . I 6 HOH B 24 188 45 HOH HOH . I 6 HOH B 25 189 46 HOH HOH . I 6 HOH B 26 190 47 HOH HOH . I 6 HOH B 27 191 48 HOH HOH . I 6 HOH B 28 192 49 HOH HOH . I 6 HOH B 29 193 50 HOH HOH . I 6 HOH B 30 194 51 HOH HOH . I 6 HOH B 31 195 52 HOH HOH . I 6 HOH B 32 196 56 HOH HOH . I 6 HOH B 33 197 57 HOH HOH . I 6 HOH B 34 198 58 HOH HOH . I 6 HOH B 35 199 59 HOH HOH . I 6 HOH B 36 200 60 HOH HOH . I 6 HOH B 37 201 62 HOH HOH . I 6 HOH B 38 202 63 HOH HOH . I 6 HOH B 39 203 69 HOH HOH . I 6 HOH B 40 204 70 HOH HOH . I 6 HOH B 41 205 71 HOH HOH . I 6 HOH B 42 206 72 HOH HOH . I 6 HOH B 43 207 73 HOH HOH . I 6 HOH B 44 208 74 HOH HOH . I 6 HOH B 45 209 75 HOH HOH . I 6 HOH B 46 210 76 HOH HOH . I 6 HOH B 47 211 77 HOH HOH . I 6 HOH B 48 212 79 HOH HOH . I 6 HOH B 49 213 86 HOH HOH . I 6 HOH B 50 214 87 HOH HOH . I 6 HOH B 51 215 89 HOH HOH . I 6 HOH B 52 216 90 HOH HOH . I 6 HOH B 53 217 97 HOH HOH . I 6 HOH B 54 218 101 HOH HOH . I 6 HOH B 55 219 103 HOH HOH . I 6 HOH B 56 220 107 HOH HOH . I 6 HOH B 57 221 108 HOH HOH . I 6 HOH B 58 222 109 HOH HOH . I 6 HOH B 59 223 113 HOH HOH . I 6 HOH B 60 224 114 HOH HOH . I 6 HOH B 61 225 115 HOH HOH . I 6 HOH B 62 226 116 HOH HOH . I 6 HOH B 63 227 117 HOH HOH . I 6 HOH B 64 228 121 HOH HOH . I 6 HOH B 65 229 122 HOH HOH . I 6 HOH B 66 230 125 HOH HOH . I 6 HOH B 67 231 128 HOH HOH . I 6 HOH B 68 232 130 HOH HOH . I 6 HOH B 69 233 132 HOH HOH . I 6 HOH B 70 234 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 5 -38.183 6.796 -61.306 1 61.54 ? C1 GOL 164 B 1 HETATM 2 O O1 GOL . . . G 5 -38.631 6.061 -60.177 1 50.21 ? O1 GOL 164 B 1 HETATM 3 C C2 GOL . . . G 5 -36.885 7.574 -61.058 1 60.81 ? C2 GOL 164 B 1 HETATM 4 O O2 GOL . . . G 5 -36.107 7.667 -62.235 1 63.1 ? O2 GOL 164 B 1 HETATM 5 C C3 GOL . . . G 5 -37.109 9.005 -60.591 1 64.51 ? C3 GOL 164 B 1 HETATM 6 O O3 GOL . . . G 5 -38.183 9.118 -59.698 1 56.11 ? O3 GOL 164 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #