data_3SAP # _model_server_result.job_id KNaQlFakBAWerd-1LFM8_A _model_server_result.datetime_utc '2024-11-16 23:36:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3sap # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":266}' # _entry.id 3SAP # _exptl.entry_id 3SAP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 365.47 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{[(5-butylpyrimidin-2-yl)sulfanyl]acetyl}benzenesulfonamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.08 _cell.angle_gamma 90 _cell.entry_id 3SAP _cell.length_a 42.019 _cell.length_b 40.956 _cell.length_c 71.742 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SAP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 94 1_555 B ZN ZN . A ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc2 A NE2 HIS 96 A HIS 96 1_555 B ZN ZN . A ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc3 A ND1 HIS 119 A HIS 119 1_555 B ZN ZN . A ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc4 B ZN ZN . A ZN 262 1_555 F N48 E2I . A E2I 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? # _chem_comp.formula 'C16 H19 N3 O3 S2' _chem_comp.formula_weight 365.47 _chem_comp.id E2I _chem_comp.mon_nstd_flag . _chem_comp.name 4-{[(5-butylpyrimidin-2-yl)sulfanyl]acetyl}benzenesulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 N1 E2I doub 115 n y N1 C2 E2I sing 116 n y C3 C2 E2I doub 117 n y C2 H2 E2I sing 118 n n C4 C3 E2I sing 119 n y C3 C13 E2I sing 120 n n N5 C4 E2I doub 121 n y C4 H4 E2I sing 122 n n N5 C6 E2I sing 123 n y S21 C6 E2I sing 124 n n C15 C13 E2I sing 125 n n C13 H13 E2I sing 126 n n C13 H13A E2I sing 127 n n C15 C17 E2I sing 128 n n C15 H15 E2I sing 129 n n C15 H15A E2I sing 130 n n C17 C19 E2I sing 131 n n C17 H17 E2I sing 132 n n C17 H17A E2I sing 133 n n C19 H19 E2I sing 134 n n C19 H19A E2I sing 135 n n C19 H19B E2I sing 136 n n S21 C23 E2I sing 137 n n C25 C23 E2I sing 138 n n C23 H23 E2I sing 139 n n C23 H23A E2I sing 140 n n O27 C25 E2I doub 141 n n C25 C29 E2I sing 142 n n C29 C31 E2I doub 143 n y C29 C35 E2I sing 144 n y C31 C32 E2I sing 145 n y C31 H31 E2I sing 146 n n C32 C33 E2I doub 147 n y C32 H32 E2I sing 148 n n C34 C33 E2I sing 149 n y C33 S42 E2I sing 150 n n C35 C34 E2I doub 151 n y C34 H34 E2I sing 152 n n C35 H35 E2I sing 153 n n N48 S42 E2I sing 154 n n O46 S42 E2I doub 155 n n S42 O44 E2I doub 156 n n N48 HN48 E2I sing 157 n n N48 HN4A E2I sing 158 n n # _atom_sites.entry_id 3SAP _atom_sites.fract_transf_matrix[1][1] 0.023799 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005969 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024416 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014371 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 262 1 ZN ZN . C 3 BCN A 1 263 1 BCN BCN . D 4 MES A 1 264 1 MES MES . E 5 DMS A 1 265 1 DMS DMS . F 6 E2I A 1 266 1 E2I E2I . G 7 HOH A 1 126 126 HOH HOH . G 7 HOH A 2 267 1 HOH HOH . G 7 HOH A 3 268 2 HOH HOH . G 7 HOH A 4 269 3 HOH HOH . G 7 HOH A 5 270 4 HOH HOH . G 7 HOH A 6 271 5 HOH HOH . G 7 HOH A 7 272 6 HOH HOH . G 7 HOH A 8 273 7 HOH HOH . G 7 HOH A 9 274 8 HOH HOH . G 7 HOH A 10 275 9 HOH HOH . G 7 HOH A 11 276 10 HOH HOH . G 7 HOH A 12 277 11 HOH HOH . G 7 HOH A 13 278 12 HOH HOH . G 7 HOH A 14 279 13 HOH HOH . G 7 HOH A 15 280 14 HOH HOH . G 7 HOH A 16 281 15 HOH HOH . G 7 HOH A 17 282 16 HOH HOH . G 7 HOH A 18 283 17 HOH HOH . G 7 HOH A 19 284 18 HOH HOH . G 7 HOH A 20 285 19 HOH HOH . G 7 HOH A 21 286 20 HOH HOH . G 7 HOH A 22 287 21 HOH HOH . G 7 HOH A 23 288 22 HOH HOH . G 7 HOH A 24 289 23 HOH HOH . G 7 HOH A 25 290 24 HOH HOH . G 7 HOH A 26 291 25 HOH HOH . G 7 HOH A 27 292 26 HOH HOH . G 7 HOH A 28 293 27 HOH HOH . G 7 HOH A 29 294 28 HOH HOH . G 7 HOH A 30 295 29 HOH HOH . G 7 HOH A 31 296 30 HOH HOH . G 7 HOH A 32 297 31 HOH HOH . G 7 HOH A 33 298 32 HOH HOH . G 7 HOH A 34 299 33 HOH HOH . G 7 HOH A 35 300 34 HOH HOH . G 7 HOH A 36 301 35 HOH HOH . G 7 HOH A 37 302 36 HOH HOH . G 7 HOH A 38 303 37 HOH HOH . G 7 HOH A 39 304 38 HOH HOH . G 7 HOH A 40 305 39 HOH HOH . G 7 HOH A 41 306 40 HOH HOH . G 7 HOH A 42 307 41 HOH HOH . G 7 HOH A 43 308 42 HOH HOH . G 7 HOH A 44 309 43 HOH HOH . G 7 HOH A 45 310 44 HOH HOH . G 7 HOH A 46 311 45 HOH HOH . G 7 HOH A 47 312 46 HOH HOH . G 7 HOH A 48 313 47 HOH HOH . G 7 HOH A 49 314 48 HOH HOH . G 7 HOH A 50 315 49 HOH HOH . G 7 HOH A 51 316 50 HOH HOH . G 7 HOH A 52 317 51 HOH HOH . G 7 HOH A 53 318 52 HOH HOH . G 7 HOH A 54 319 53 HOH HOH . G 7 HOH A 55 320 54 HOH HOH . G 7 HOH A 56 321 55 HOH HOH . G 7 HOH A 57 322 56 HOH HOH . G 7 HOH A 58 323 57 HOH HOH . G 7 HOH A 59 324 58 HOH HOH . G 7 HOH A 60 325 59 HOH HOH . G 7 HOH A 61 326 60 HOH HOH . G 7 HOH A 62 327 61 HOH HOH . G 7 HOH A 63 328 62 HOH HOH . G 7 HOH A 64 329 63 HOH HOH . G 7 HOH A 65 330 64 HOH HOH . G 7 HOH A 66 331 65 HOH HOH . G 7 HOH A 67 332 66 HOH HOH . G 7 HOH A 68 333 67 HOH HOH . G 7 HOH A 69 334 68 HOH HOH . G 7 HOH A 70 335 69 HOH HOH . G 7 HOH A 71 336 70 HOH HOH . G 7 HOH A 72 337 71 HOH HOH . G 7 HOH A 73 338 72 HOH HOH . G 7 HOH A 74 339 73 HOH HOH . G 7 HOH A 75 340 74 HOH HOH . G 7 HOH A 76 341 75 HOH HOH . G 7 HOH A 77 342 76 HOH HOH . G 7 HOH A 78 343 77 HOH HOH . G 7 HOH A 79 344 78 HOH HOH . G 7 HOH A 80 345 79 HOH HOH . G 7 HOH A 81 346 80 HOH HOH . G 7 HOH A 82 347 81 HOH HOH . G 7 HOH A 83 348 82 HOH HOH . G 7 HOH A 84 349 83 HOH HOH . G 7 HOH A 85 350 84 HOH HOH . G 7 HOH A 86 351 85 HOH HOH . G 7 HOH A 87 352 86 HOH HOH . G 7 HOH A 88 353 87 HOH HOH . G 7 HOH A 89 354 88 HOH HOH . G 7 HOH A 90 355 89 HOH HOH . G 7 HOH A 91 356 90 HOH HOH . G 7 HOH A 92 357 91 HOH HOH . G 7 HOH A 93 358 92 HOH HOH . G 7 HOH A 94 359 93 HOH HOH . G 7 HOH A 95 360 94 HOH HOH . G 7 HOH A 96 361 95 HOH HOH . G 7 HOH A 97 362 96 HOH HOH . G 7 HOH A 98 363 97 HOH HOH . G 7 HOH A 99 364 98 HOH HOH . G 7 HOH A 100 365 99 HOH HOH . G 7 HOH A 101 366 100 HOH HOH . G 7 HOH A 102 367 101 HOH HOH . G 7 HOH A 103 368 102 HOH HOH . G 7 HOH A 104 369 103 HOH HOH . G 7 HOH A 105 370 104 HOH HOH . G 7 HOH A 106 371 105 HOH HOH . G 7 HOH A 107 372 106 HOH HOH . G 7 HOH A 108 373 107 HOH HOH . G 7 HOH A 109 374 108 HOH HOH . G 7 HOH A 110 375 109 HOH HOH . G 7 HOH A 111 376 110 HOH HOH . G 7 HOH A 112 377 111 HOH HOH . G 7 HOH A 113 378 112 HOH HOH . G 7 HOH A 114 379 113 HOH HOH . G 7 HOH A 115 380 114 HOH HOH . G 7 HOH A 116 381 115 HOH HOH . G 7 HOH A 117 382 116 HOH HOH . G 7 HOH A 118 383 117 HOH HOH . G 7 HOH A 119 384 118 HOH HOH . G 7 HOH A 120 385 119 HOH HOH . G 7 HOH A 121 386 120 HOH HOH . G 7 HOH A 122 387 121 HOH HOH . G 7 HOH A 123 388 122 HOH HOH . G 7 HOH A 124 389 123 HOH HOH . G 7 HOH A 125 390 124 HOH HOH . G 7 HOH A 126 391 125 HOH HOH . G 7 HOH A 127 392 127 HOH HOH . G 7 HOH A 128 393 128 HOH HOH . G 7 HOH A 129 394 129 HOH HOH . G 7 HOH A 130 395 130 HOH HOH . G 7 HOH A 131 396 131 HOH HOH . G 7 HOH A 132 397 132 HOH HOH . G 7 HOH A 133 398 133 HOH HOH . G 7 HOH A 134 399 134 HOH HOH . G 7 HOH A 135 400 135 HOH HOH . G 7 HOH A 136 401 136 HOH HOH . G 7 HOH A 137 402 137 HOH HOH . G 7 HOH A 138 403 138 HOH HOH . G 7 HOH A 139 404 139 HOH HOH . G 7 HOH A 140 405 140 HOH HOH . G 7 HOH A 141 406 141 HOH HOH . G 7 HOH A 142 407 142 HOH HOH . G 7 HOH A 143 408 143 HOH HOH . G 7 HOH A 144 409 144 HOH HOH . G 7 HOH A 145 410 145 HOH HOH . G 7 HOH A 146 411 146 HOH HOH . G 7 HOH A 147 412 147 HOH HOH . G 7 HOH A 148 413 148 HOH HOH . G 7 HOH A 149 414 149 HOH HOH . G 7 HOH A 150 415 150 HOH HOH . G 7 HOH A 151 416 151 HOH HOH . G 7 HOH A 152 417 152 HOH HOH . G 7 HOH A 153 418 153 HOH HOH . G 7 HOH A 154 419 154 HOH HOH . G 7 HOH A 155 420 155 HOH HOH . G 7 HOH A 156 421 156 HOH HOH . G 7 HOH A 157 422 157 HOH HOH . G 7 HOH A 158 423 158 HOH HOH . G 7 HOH A 159 424 159 HOH HOH . G 7 HOH A 160 425 160 HOH HOH . G 7 HOH A 161 426 161 HOH HOH . G 7 HOH A 162 427 162 HOH HOH . G 7 HOH A 163 428 163 HOH HOH . G 7 HOH A 164 429 164 HOH HOH . G 7 HOH A 165 430 165 HOH HOH . G 7 HOH A 166 431 166 HOH HOH . G 7 HOH A 167 432 167 HOH HOH . G 7 HOH A 168 433 168 HOH HOH . G 7 HOH A 169 434 169 HOH HOH . G 7 HOH A 170 435 170 HOH HOH . G 7 HOH A 171 436 171 HOH HOH . G 7 HOH A 172 437 172 HOH HOH . G 7 HOH A 173 438 173 HOH HOH . G 7 HOH A 174 439 174 HOH HOH . G 7 HOH A 175 440 175 HOH HOH . G 7 HOH A 176 441 176 HOH HOH . G 7 HOH A 177 442 177 HOH HOH . G 7 HOH A 178 443 178 HOH HOH . G 7 HOH A 179 444 179 HOH HOH . G 7 HOH A 180 445 180 HOH HOH . G 7 HOH A 181 446 181 HOH HOH . G 7 HOH A 182 447 182 HOH HOH . G 7 HOH A 183 448 183 HOH HOH . G 7 HOH A 184 449 184 HOH HOH . G 7 HOH A 185 450 185 HOH HOH . G 7 HOH A 186 451 186 HOH HOH . G 7 HOH A 187 452 187 HOH HOH . G 7 HOH A 188 453 188 HOH HOH . G 7 HOH A 189 454 189 HOH HOH . G 7 HOH A 190 455 190 HOH HOH . G 7 HOH A 191 456 191 HOH HOH . G 7 HOH A 192 457 192 HOH HOH . G 7 HOH A 193 458 193 HOH HOH . G 7 HOH A 194 459 194 HOH HOH . G 7 HOH A 195 460 195 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 E2I . . . F 6 -0.503 8.732 14.853 1 49.51 ? N1 E2I 266 A 1 HETATM 2 C C2 E2I . . . F 6 0.148 9.739 15.369 1 50.66 ? C2 E2I 266 A 1 HETATM 3 C C3 E2I . . . F 6 0.189 11.014 14.847 1 50.07 ? C3 E2I 266 A 1 HETATM 4 C C4 E2I . . . F 6 -0.515 11.291 13.664 1 49.91 ? C4 E2I 266 A 1 HETATM 5 N N5 E2I . . . F 6 -1.169 10.211 13.171 1 49.44 ? N5 E2I 266 A 1 HETATM 6 C C6 E2I . . . F 6 -1.133 8.976 13.789 1 49.06 ? C6 E2I 266 A 1 HETATM 7 C C13 E2I . . . F 6 1.015 11.923 15.662 1 49.92 ? C13 E2I 266 A 1 HETATM 8 C C15 E2I . . . F 6 2.478 11.555 15.291 1 50.34 ? C15 E2I 266 A 1 HETATM 9 C C17 E2I . . . F 6 3.469 11.818 16.425 1 51.24 ? C17 E2I 266 A 1 HETATM 10 C C19 E2I . . . F 6 3.898 10.543 17.185 1 50.63 ? C19 E2I 266 A 1 HETATM 11 S S21 E2I . . . F 6 -1.939 7.577 13.177 1 48.81 ? S21 E2I 266 A 1 HETATM 12 C C23 E2I . . . F 6 -2.078 5.872 13.748 1 34.66 ? C23 E2I 266 A 1 HETATM 13 C C25 E2I . . . F 6 -3.54 5.454 13.582 1 27.21 ? C25 E2I 266 A 1 HETATM 14 O O27 E2I . . . F 6 -4.287 6.038 12.79 1 27.98 ? O27 E2I 266 A 1 HETATM 15 C C29 E2I . . . F 6 -4.146 4.325 14.368 1 23.55 ? C29 E2I 266 A 1 HETATM 16 C C31 E2I . . . F 6 -5.522 4.295 14.617 1 20.25 ? C31 E2I 266 A 1 HETATM 17 C C32 E2I . . . F 6 -6.026 3.2 15.359 1 19.07 ? C32 E2I 266 A 1 HETATM 18 C C33 E2I . . . F 6 -5.199 2.201 15.848 1 20.17 ? C33 E2I 266 A 1 HETATM 19 C C34 E2I . . . F 6 -3.846 2.242 15.592 1 20.29 ? C34 E2I 266 A 1 HETATM 20 C C35 E2I . . . F 6 -3.315 3.302 14.847 1 22.41 ? C35 E2I 266 A 1 HETATM 21 S S42 E2I . . . F 6 -5.853 0.804 16.77 1 17.25 ? S42 E2I 266 A 1 HETATM 22 O O44 E2I . . . F 6 -5.305 0.961 18.129 1 14.61 ? O44 E2I 266 A 1 HETATM 23 O O46 E2I . . . F 6 -7.314 0.901 16.626 1 13.86 ? O46 E2I 266 A 1 HETATM 24 N N48 E2I . . . F 6 -5.139 -0.522 15.985 1 14.87 ? N48 E2I 266 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 24 #