data_3SBL # _model_server_result.job_id uLQE0f64MMYHShim4E1iyg _model_server_result.datetime_utc '2024-11-07 02:45:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3sbl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":281}' # _entry.id 3SBL # _exptl.entry_id 3SBL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3SBL _cell.length_a 66.05 _cell.length_b 83.269 _cell.length_c 105.401 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SBL _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1 A,B,C 2 1,2,3,4 A,B,C 3 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_554 -x,y,-z-1 -1 0 0 0 1 0 0 0 -1 0 0 -105.401 4 'crystal symmetry operation' 4_554 x,-y,-z-1 1 0 0 0 -1 0 0 0 -1 0 0 -105.401 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 3SBL _atom_sites.fract_transf_matrix[1][1] 0.01514 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012009 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009488 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT A 1 281 281 CIT CIT . C 3 HOH A 1 1 1 HOH HOH . C 3 HOH A 2 2 2 HOH HOH . C 3 HOH A 3 3 3 HOH HOH . C 3 HOH A 4 4 4 HOH HOH . C 3 HOH A 5 5 5 HOH HOH . C 3 HOH A 6 6 6 HOH HOH . C 3 HOH A 7 7 7 HOH HOH . C 3 HOH A 8 8 8 HOH HOH . C 3 HOH A 9 9 9 HOH HOH . C 3 HOH A 10 10 10 HOH HOH . C 3 HOH A 11 11 11 HOH HOH . C 3 HOH A 12 12 12 HOH HOH . C 3 HOH A 13 13 13 HOH HOH . C 3 HOH A 14 14 14 HOH HOH . C 3 HOH A 15 15 15 HOH HOH . C 3 HOH A 16 16 16 HOH HOH . C 3 HOH A 17 17 17 HOH HOH . C 3 HOH A 18 18 18 HOH HOH . C 3 HOH A 19 19 19 HOH HOH . C 3 HOH A 20 20 20 HOH HOH . C 3 HOH A 21 21 21 HOH HOH . C 3 HOH A 22 22 22 HOH HOH . C 3 HOH A 23 23 23 HOH HOH . C 3 HOH A 24 24 24 HOH HOH . C 3 HOH A 25 25 25 HOH HOH . C 3 HOH A 26 26 26 HOH HOH . C 3 HOH A 27 27 27 HOH HOH . C 3 HOH A 28 28 28 HOH HOH . C 3 HOH A 29 29 29 HOH HOH . C 3 HOH A 30 30 30 HOH HOH . C 3 HOH A 31 31 31 HOH HOH . C 3 HOH A 32 32 32 HOH HOH . C 3 HOH A 33 33 33 HOH HOH . C 3 HOH A 34 271 34 HOH HOH . C 3 HOH A 35 272 35 HOH HOH . C 3 HOH A 36 273 36 HOH HOH . C 3 HOH A 37 274 37 HOH HOH . C 3 HOH A 38 275 38 HOH HOH . C 3 HOH A 39 276 39 HOH HOH . C 3 HOH A 40 277 40 HOH HOH . C 3 HOH A 41 278 41 HOH HOH . C 3 HOH A 42 279 42 HOH HOH . C 3 HOH A 43 280 43 HOH HOH . C 3 HOH A 44 282 44 HOH HOH . C 3 HOH A 45 283 45 HOH HOH . C 3 HOH A 46 284 46 HOH HOH . C 3 HOH A 47 285 47 HOH HOH . C 3 HOH A 48 286 48 HOH HOH . C 3 HOH A 49 287 49 HOH HOH . C 3 HOH A 50 288 50 HOH HOH . C 3 HOH A 51 289 51 HOH HOH . C 3 HOH A 52 290 52 HOH HOH . C 3 HOH A 53 291 53 HOH HOH . C 3 HOH A 54 292 54 HOH HOH . C 3 HOH A 55 293 55 HOH HOH . C 3 HOH A 56 294 56 HOH HOH . C 3 HOH A 57 295 57 HOH HOH . C 3 HOH A 58 296 58 HOH HOH . C 3 HOH A 59 297 59 HOH HOH . C 3 HOH A 60 298 60 HOH HOH . C 3 HOH A 61 299 61 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . B 2 -1.518 -12.914 -48.77 1 60.21 ? C1 CIT 281 A 1 HETATM 2 O O1 CIT . . . B 2 -2.368 -12.267 -48.145 1 58.55 ? O1 CIT 281 A 1 HETATM 3 O O2 CIT . . . B 2 -0.91 -13.818 -48.165 1 68.05 ? O2 CIT 281 A 1 HETATM 4 C C2 CIT . . . B 2 -1.231 -12.577 -50.209 1 54.98 ? C2 CIT 281 A 1 HETATM 5 C C3 CIT . . . B 2 -1.518 -13.76 -51.123 1 54.23 ? C3 CIT 281 A 1 HETATM 6 O O7 CIT . . . B 2 -1.242 -13.288 -52.465 1 56.11 ? O7 CIT 281 A 1 HETATM 7 C C4 CIT . . . B 2 -2.975 -14.229 -51.013 1 57.38 ? C4 CIT 281 A 1 HETATM 8 C C5 CIT . . . B 2 -3.266 -15.261 -52.094 1 58.41 ? C5 CIT 281 A 1 HETATM 9 O O3 CIT . . . B 2 -3.985 -15.015 -53.095 1 54.76 ? O3 CIT 281 A 1 HETATM 10 O O4 CIT . . . B 2 -2.771 -16.403 -52.009 1 61.72 ? O4 CIT 281 A 1 HETATM 11 C C6 CIT . . . B 2 -0.585 -14.931 -50.843 1 47.83 ? C6 CIT 281 A 1 HETATM 12 O O5 CIT . . . B 2 0.375 -15.138 -51.621 1 45.9 ? O5 CIT 281 A 1 HETATM 13 O O6 CIT . . . B 2 -0.755 -15.698 -49.859 1 44.79 ? O6 CIT 281 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 13 #