data_3SCF
#
_model_server_result.job_id            oXsTq-qanVPGtQlTH8o0Gw 
_model_server_result.datetime_utc      '2024-10-12 15:27:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3scf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":206}' 
#
_entry.id    3SCF 
#
_exptl.entry_id    3SCF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              140.075 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(S)-2-HYDROXYPROPYLPHOSPHONIC ACID' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3SCF 
_cell.length_a            111.661 
_cell.length_b            111.661 
_cell.length_c            152.158 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3SCF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,D,E,F,G,H,I,J,N,O 1 1,2 
C,K,L,M,P 2 1,3,4,5 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_765 -x+2,-y+1,z -1 0 0 0 -1 0 0 0 1 223.322 111.661 0 
3 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 111.661 111.661 0 
4 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
5 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 111.661 111.661 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 J N N 
? 4 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 138 A HIS 138 1_555 D FE FE2 . A FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? 
metalc ? metalc2 A OE1 GLU 142 A GLU 142 1_555 D FE FE2 . A FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
metalc ? metalc3 A NE2 HIS 180 A HIS 180 1_555 D FE FE2 . A FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? 
metalc ? metalc4 D FE FE2 . A FE2 201 1_555 F O14 S0H . A S0H 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? 
metalc ? metalc5 D FE FE2 . A FE2 201 1_555 F O6 S0H . A S0H 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
metalc ? metalc6 D FE FE2 . A FE2 201 1_555 E N NO . A NO 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.64 ? 
metalc ? metalc7 B NE2 HIS 138 B HIS 138 1_555 H FE FE2 . B FE2 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? 
metalc ? metalc8 B OE1 GLU 142 B GLU 142 1_555 H FE FE2 . B FE2 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
metalc ? metalc9 B NE2 HIS 180 B HIS 180 1_555 H FE FE2 . B FE2 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? 
metalc ? metalc10 H FE FE2 . B FE2 202 1_555 J O14 S0H . B S0H 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
metalc ? metalc11 H FE FE2 . B FE2 202 1_555 J O6 S0H . B S0H 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? 
metalc ? metalc12 H FE FE2 . B FE2 202 1_555 I N NO . B NO 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.653 ? 
metalc ? metalc13 C NE2 HIS 138 C HIS 138 1_555 K FE FE2 . C FE2 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? 
metalc ? metalc14 C OE2 GLU 142 C GLU 142 1_555 K FE FE2 . C FE2 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? 
metalc ? metalc15 C NE2 HIS 180 C HIS 180 1_555 K FE FE2 . C FE2 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc16 K FE FE2 . C FE2 203 1_555 L O14 S0H . C S0H 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? 
metalc ? metalc17 K FE FE2 . C FE2 203 1_555 L O6 S0H . C S0H 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc18 K FE FE2 . C FE2 203 1_555 P O HOH . C HOH 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? 
#
_chem_comp.formula           'C3 H9 O4 P' 
_chem_comp.formula_weight    140.075 
_chem_comp.id                S0H 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(S)-2-HYDROXYPROPYLPHOSPHONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P1 C2 S0H sing 291 n n 
P1 O13 S0H sing 292 n n 
P1 O14 S0H doub 293 n n 
P1 O15 S0H sing 294 n n 
C2 C3 S0H sing 295 n n 
C2 H21 S0H sing 296 n n 
C2 H22 S0H sing 297 n n 
C3 O6 S0H sing 298 n n 
C3 C1 S0H sing 299 n n 
C3 H3 S0H sing 300 n n 
O6 HO6 S0H sing 301 n n 
C1 H11 S0H sing 302 n n 
C1 H12 S0H sing 303 n n 
C1 H13A S0H sing 304 n n 
O13 H13 S0H sing 305 n n 
O15 H15 S0H sing 306 n n 
#
_atom_sites.entry_id                     3SCF 
_atom_sites.fract_transf_matrix[1][1]    0.008956 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008956 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006572 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 FE2 A 1 201 201 FE2 FE2 . 
E 3 NO A 1 209 209 NO NO . 
F 4 S0H A 1 205 205 S0H S0H . 
G 5 GOL A 1 199 1 GOL GOL . 
H 2 FE2 B 1 202 202 FE2 FE2 . 
I 3 NO B 1 210 210 NO NO . 
J 4 S0H B 1 206 206 S0H S0H . 
K 2 FE2 C 1 203 203 FE2 FE2 . 
L 4 S0H C 1 207 207 S0H S0H . 
M 5 GOL C 1 199 2 GOL GOL . 
N 6 HOH A 1 200 2 HOH HOH . 
N 6 HOH A 2 202 7 HOH HOH . 
N 6 HOH A 3 203 85 HOH HOH . 
N 6 HOH A 4 204 86 HOH HOH . 
O 6 HOH B 1 199 1 HOH HOH . 
O 6 HOH B 2 200 16 HOH HOH . 
O 6 HOH B 3 201 17 HOH HOH . 
O 6 HOH B 4 203 19 HOH HOH . 
O 6 HOH B 5 204 27 HOH HOH . 
O 6 HOH B 6 205 28 HOH HOH . 
O 6 HOH B 7 207 29 HOH HOH . 
O 6 HOH B 8 208 31 HOH HOH . 
O 6 HOH B 9 209 80 HOH HOH . 
P 6 HOH C 1 200 38 HOH HOH . 
P 6 HOH C 2 201 40 HOH HOH . 
P 6 HOH C 3 202 42 HOH HOH . 
P 6 HOH C 4 204 45 HOH HOH . 
P 6 HOH C 5 205 46 HOH HOH . 
P 6 HOH C 6 206 48 HOH HOH . 
P 6 HOH C 7 208 49 HOH HOH . 
P 6 HOH C 8 209 67 HOH HOH . 
P 6 HOH C 9 210 69 HOH HOH . 
P 6 HOH C 10 211 70 HOH HOH . 
P 6 HOH C 11 212 72 HOH HOH . 
P 6 HOH C 12 213 78 HOH HOH . 
P 6 HOH C 13 214 79 HOH HOH . 
P 6 HOH C 14 215 84 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P1 S0H . . . J 4 114.334 69.841 2.841 1 82.55 ? P1 S0H 206 B 1 
HETATM 2 C C2 S0H . . . J 4 114.163 68.363 1.79 1 79.07 ? C2 S0H 206 B 1 
HETATM 3 C C3 S0H . . . J 4 115.545 67.945 1.286 1 79.56 ? C3 S0H 206 B 1 
HETATM 4 O O6 S0H . . . J 4 116.179 67.046 2.169 1 76.24 ? O6 S0H 206 B 1 
HETATM 5 C C1 S0H . . . J 4 115.425 67.416 0.344 1 81.05 ? C1 S0H 206 B 1 
HETATM 6 O O13 S0H . . . J 4 114.968 70.957 2.173 1 81.22 ? O13 S0H 206 B 1 
HETATM 7 O O14 S0H . . . J 4 115.101 69.407 4.142 1 77.94 ? O14 S0H 206 B 1 
HETATM 8 O O15 S0H . . . J 4 112.971 70.222 3.472 1 81.27 ? O15 S0H 206 B 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#