data_3SDP # _model_server_result.job_id R0xHhOlnrqrtfFSmmVFbmA _model_server_result.datetime_utc '2024-10-18 23:37:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3sdp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":196}' # _entry.id 3SDP # _exptl.entry_id 3SDP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.8 _cell.angle_gamma 90 _cell.entry_id 3SDP _cell.length_a 81.9 _cell.length_b 49.1 _cell.length_c 61.7 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SDP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 26 A HIS 26 1_555 C FE FE . A FE 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc2 A NE2 HIS 74 A HIS 74 1_555 C FE FE . A FE 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc3 A OD2 ASP 156 A ASP 156 1_555 C FE FE . A FE 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc4 A NE2 HIS 160 A HIS 160 1_555 C FE FE . A FE 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc5 B NE2 HIS 26 B HIS 26 1_555 D FE FE . B FE 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? metalc ? metalc6 B NE2 HIS 74 B HIS 74 1_555 D FE FE . B FE 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc7 B OD2 ASP 156 B ASP 156 1_555 D FE FE . B FE 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc8 B NE2 HIS 160 B HIS 160 1_555 D FE FE . B FE 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3SDP _atom_sites.fract_transf_matrix[1][1] 0.01221 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003686 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020367 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01693 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FE A 1 196 191 FE FE . D 2 FE B 1 196 191 FE FE . E 3 HOH A 1 601 601 HOH HOH . E 3 HOH A 2 602 602 HOH HOH . E 3 HOH A 3 603 603 HOH HOH . E 3 HOH A 4 604 604 HOH HOH . E 3 HOH A 5 605 605 HOH HOH . E 3 HOH A 6 607 607 HOH HOH . E 3 HOH A 7 608 608 HOH HOH . E 3 HOH A 8 609 609 HOH HOH . E 3 HOH A 9 610 610 HOH HOH . E 3 HOH A 10 611 611 HOH HOH . E 3 HOH A 11 612 612 HOH HOH . E 3 HOH A 12 613 613 HOH HOH . E 3 HOH A 13 614 614 HOH HOH . E 3 HOH A 14 615 615 HOH HOH . E 3 HOH A 15 616 616 HOH HOH . E 3 HOH A 16 617 617 HOH HOH . E 3 HOH A 17 618 618 HOH HOH . E 3 HOH A 18 619 619 HOH HOH . E 3 HOH A 19 620 620 HOH HOH . E 3 HOH A 20 621 621 HOH HOH . E 3 HOH A 21 622 622 HOH HOH . E 3 HOH A 22 623 623 HOH HOH . E 3 HOH A 23 624 624 HOH HOH . E 3 HOH A 24 625 625 HOH HOH . E 3 HOH A 25 626 626 HOH HOH . E 3 HOH A 26 627 627 HOH HOH . E 3 HOH A 27 628 628 HOH HOH . E 3 HOH A 28 629 629 HOH HOH . E 3 HOH A 29 630 630 HOH HOH . E 3 HOH A 30 631 631 HOH HOH . E 3 HOH A 31 632 632 HOH HOH . E 3 HOH A 32 633 633 HOH HOH . E 3 HOH A 33 634 634 HOH HOH . E 3 HOH A 34 635 635 HOH HOH . E 3 HOH A 35 636 636 HOH HOH . E 3 HOH A 36 637 637 HOH HOH . E 3 HOH A 37 638 638 HOH HOH . E 3 HOH A 38 639 639 HOH HOH . E 3 HOH A 39 640 640 HOH HOH . E 3 HOH A 40 641 641 HOH HOH . E 3 HOH A 41 642 642 HOH HOH . E 3 HOH A 42 643 643 HOH HOH . E 3 HOH A 43 644 644 HOH HOH . E 3 HOH A 44 645 645 HOH HOH . E 3 HOH A 45 646 646 HOH HOH . E 3 HOH A 46 647 647 HOH HOH . E 3 HOH A 47 648 648 HOH HOH . E 3 HOH A 48 649 649 HOH HOH . E 3 HOH A 49 650 650 HOH HOH . E 3 HOH A 50 651 651 HOH HOH . E 3 HOH A 51 652 652 HOH HOH . E 3 HOH A 52 653 653 HOH HOH . E 3 HOH A 53 654 654 HOH HOH . E 3 HOH A 54 655 655 HOH HOH . E 3 HOH A 55 656 656 HOH HOH . E 3 HOH A 56 657 657 HOH HOH . E 3 HOH A 57 658 658 HOH HOH . E 3 HOH A 58 659 659 HOH HOH . E 3 HOH A 59 660 660 HOH HOH . E 3 HOH A 60 661 661 HOH HOH . E 3 HOH A 61 662 662 HOH HOH . E 3 HOH A 62 663 663 HOH HOH . E 3 HOH A 63 664 664 HOH HOH . E 3 HOH A 64 665 665 HOH HOH . E 3 HOH A 65 666 666 HOH HOH . E 3 HOH A 66 667 667 HOH HOH . E 3 HOH A 67 668 668 HOH HOH . E 3 HOH A 68 669 669 HOH HOH . E 3 HOH A 69 670 670 HOH HOH . E 3 HOH A 70 671 671 HOH HOH . E 3 HOH A 71 672 672 HOH HOH . E 3 HOH A 72 673 673 HOH HOH . E 3 HOH A 73 674 674 HOH HOH . E 3 HOH A 74 675 675 HOH HOH . E 3 HOH A 75 676 676 HOH HOH . E 3 HOH A 76 677 677 HOH HOH . E 3 HOH A 77 678 678 HOH HOH . E 3 HOH A 78 679 679 HOH HOH . E 3 HOH A 79 680 680 HOH HOH . E 3 HOH A 80 681 681 HOH HOH . E 3 HOH A 81 682 682 HOH HOH . E 3 HOH A 82 683 683 HOH HOH . E 3 HOH A 83 684 684 HOH HOH . E 3 HOH A 84 685 685 HOH HOH . E 3 HOH A 85 686 686 HOH HOH . E 3 HOH A 86 687 687 HOH HOH . E 3 HOH A 87 688 688 HOH HOH . E 3 HOH A 88 689 689 HOH HOH . E 3 HOH A 89 690 690 HOH HOH . E 3 HOH A 90 691 691 HOH HOH . E 3 HOH A 91 692 692 HOH HOH . E 3 HOH A 92 693 693 HOH HOH . E 3 HOH A 93 694 694 HOH HOH . E 3 HOH A 94 695 695 HOH HOH . E 3 HOH A 95 696 696 HOH HOH . E 3 HOH A 96 697 697 HOH HOH . E 3 HOH A 97 698 698 HOH HOH . E 3 HOH A 98 699 699 HOH HOH . E 3 HOH A 99 700 700 HOH HOH . E 3 HOH A 100 703 703 HOH HOH . E 3 HOH A 101 705 705 HOH HOH . E 3 HOH A 102 724 724 HOH HOH . F 3 HOH B 1 606 606 HOH HOH . F 3 HOH B 2 701 701 HOH HOH . F 3 HOH B 3 702 702 HOH HOH . F 3 HOH B 4 704 704 HOH HOH . F 3 HOH B 5 706 706 HOH HOH . F 3 HOH B 6 707 707 HOH HOH . F 3 HOH B 7 708 708 HOH HOH . F 3 HOH B 8 709 709 HOH HOH . F 3 HOH B 9 710 710 HOH HOH . F 3 HOH B 10 711 711 HOH HOH . F 3 HOH B 11 712 712 HOH HOH . F 3 HOH B 12 713 713 HOH HOH . F 3 HOH B 13 714 714 HOH HOH . F 3 HOH B 14 715 715 HOH HOH . F 3 HOH B 15 716 716 HOH HOH . F 3 HOH B 16 717 717 HOH HOH . F 3 HOH B 17 718 718 HOH HOH . F 3 HOH B 18 719 719 HOH HOH . F 3 HOH B 19 720 720 HOH HOH . F 3 HOH B 20 721 721 HOH HOH . F 3 HOH B 21 722 722 HOH HOH . F 3 HOH B 22 723 723 HOH HOH . F 3 HOH B 23 725 725 HOH HOH . F 3 HOH B 24 726 726 HOH HOH . F 3 HOH B 25 727 727 HOH HOH . F 3 HOH B 26 728 728 HOH HOH . F 3 HOH B 27 729 729 HOH HOH . F 3 HOH B 28 730 730 HOH HOH . F 3 HOH B 29 731 731 HOH HOH . F 3 HOH B 30 732 732 HOH HOH . F 3 HOH B 31 733 733 HOH HOH . F 3 HOH B 32 734 734 HOH HOH . F 3 HOH B 33 735 735 HOH HOH . F 3 HOH B 34 736 736 HOH HOH . F 3 HOH B 35 737 737 HOH HOH . F 3 HOH B 36 738 738 HOH HOH . F 3 HOH B 37 739 739 HOH HOH . F 3 HOH B 38 740 740 HOH HOH . F 3 HOH B 39 741 741 HOH HOH . F 3 HOH B 40 742 742 HOH HOH . F 3 HOH B 41 743 743 HOH HOH . F 3 HOH B 42 744 744 HOH HOH . F 3 HOH B 43 745 745 HOH HOH . F 3 HOH B 44 746 746 HOH HOH . F 3 HOH B 45 747 747 HOH HOH . F 3 HOH B 46 748 748 HOH HOH . F 3 HOH B 47 749 749 HOH HOH . F 3 HOH B 48 750 750 HOH HOH . F 3 HOH B 49 751 751 HOH HOH . F 3 HOH B 50 752 752 HOH HOH . F 3 HOH B 51 753 753 HOH HOH . F 3 HOH B 52 754 754 HOH HOH . F 3 HOH B 53 755 755 HOH HOH . F 3 HOH B 54 756 756 HOH HOH . F 3 HOH B 55 757 757 HOH HOH . F 3 HOH B 56 758 758 HOH HOH . F 3 HOH B 57 759 759 HOH HOH . F 3 HOH B 58 760 760 HOH HOH . F 3 HOH B 59 761 761 HOH HOH . F 3 HOH B 60 762 762 HOH HOH . F 3 HOH B 61 763 763 HOH HOH . F 3 HOH B 62 764 764 HOH HOH . F 3 HOH B 63 765 765 HOH HOH . F 3 HOH B 64 766 766 HOH HOH . F 3 HOH B 65 767 767 HOH HOH . F 3 HOH B 66 768 768 HOH HOH . F 3 HOH B 67 769 769 HOH HOH . F 3 HOH B 68 770 770 HOH HOH . F 3 HOH B 69 771 771 HOH HOH . F 3 HOH B 70 772 772 HOH HOH . F 3 HOH B 71 773 773 HOH HOH . F 3 HOH B 72 774 774 HOH HOH . F 3 HOH B 73 775 775 HOH HOH . F 3 HOH B 74 776 776 HOH HOH . F 3 HOH B 75 777 777 HOH HOH . F 3 HOH B 76 778 778 HOH HOH . F 3 HOH B 77 779 779 HOH HOH . F 3 HOH B 78 780 780 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 94.359 _atom_site.Cartn_y 53.175 _atom_site.Cartn_z 38.216 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 9.75 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 196 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 1 #