data_3SER # _model_server_result.job_id k7DuKCce03mhkafexlMVlw _model_server_result.datetime_utc '2024-10-13 00:24:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ser # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":375}' # _entry.id 3SER # _exptl.entry_id 3SER _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.47 _cell.angle_gamma 90 _cell.entry_id 3SER _cell.length_a 57.7 _cell.length_b 116.37 _cell.length_c 65.04 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SER _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,K 1 1 B,D,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 I N N ? 3 J N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C GLC 1 B 1 GLC B 5044 MAL 2 n C GLC 2 B 2 GLC B 5044 MAL 2 n D GLC 1 D 1 GLC D 5044 MAL 2 n D GLC 2 D 2 GLC D 5044 MAL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C O4 GLC . B GLC 1 1_555 C C1 GLC . B GLC 2 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.405 sing covale ? covale2 D O4 GLC . D GLC 1 1_555 D C1 GLC . D GLC 2 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.41 sing metalc ? metalc1 A O GLN 326 A GLN 326 1_555 F CA CA . A CA 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.953 ? metalc ? metalc2 A O GLY 328 A GLY 328 1_555 F CA CA . A CA 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.102 ? metalc ? metalc3 F CA CA . A CA 374 1_555 K O HOH . A HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.955 ? metalc ? metalc4 F CA CA . A CA 374 1_555 K O HOH . A HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.069 ? metalc ? metalc5 B NE2 HIS 26 C HIS 26 1_555 G ZN ZN . C ZN 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc6 B NE2 HIS 30 C HIS 30 1_555 G ZN ZN . C ZN 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc7 B OD2 ASP 165 C ASP 165 1_555 H ZN ZN . C ZN 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc8 G ZN ZN . C ZN 373 1_555 L O HOH . C HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3SER _atom_sites.fract_transf_matrix[1][1] 0.017331 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002891 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008593 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015588 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 CL A 1 373 1 CL CL . F 4 CA A 1 374 1 CA CA . G 5 ZN C 1 373 1 ZN ZN . H 5 ZN C 1 374 2 ZN ZN . I 3 CL C 1 375 1 CL CL . J 3 CL C 1 376 1 CL CL . K 6 HOH A 1 375 1 HOH HOH . K 6 HOH A 2 376 2 HOH HOH . K 6 HOH A 3 377 3 HOH HOH . K 6 HOH A 4 378 4 HOH HOH . K 6 HOH A 5 379 6 HOH HOH . K 6 HOH A 6 380 8 HOH HOH . K 6 HOH A 7 381 12 HOH HOH . K 6 HOH A 8 382 19 HOH HOH . K 6 HOH A 9 383 21 HOH HOH . K 6 HOH A 10 384 22 HOH HOH . K 6 HOH A 11 385 23 HOH HOH . K 6 HOH A 12 386 31 HOH HOH . K 6 HOH A 13 387 32 HOH HOH . K 6 HOH A 14 388 33 HOH HOH . K 6 HOH A 15 389 35 HOH HOH . K 6 HOH A 16 390 40 HOH HOH . K 6 HOH A 17 391 41 HOH HOH . K 6 HOH A 18 392 42 HOH HOH . K 6 HOH A 19 393 44 HOH HOH . K 6 HOH A 20 394 48 HOH HOH . K 6 HOH A 21 395 50 HOH HOH . K 6 HOH A 22 396 51 HOH HOH . K 6 HOH A 23 397 56 HOH HOH . K 6 HOH A 24 398 57 HOH HOH . K 6 HOH A 25 399 58 HOH HOH . K 6 HOH A 26 400 59 HOH HOH . K 6 HOH A 27 401 62 HOH HOH . K 6 HOH A 28 402 63 HOH HOH . K 6 HOH A 29 403 66 HOH HOH . K 6 HOH A 30 404 69 HOH HOH . K 6 HOH A 31 405 70 HOH HOH . K 6 HOH A 32 406 71 HOH HOH . K 6 HOH A 33 407 72 HOH HOH . K 6 HOH A 34 408 73 HOH HOH . K 6 HOH A 35 409 74 HOH HOH . K 6 HOH A 36 410 76 HOH HOH . K 6 HOH A 37 411 77 HOH HOH . K 6 HOH A 38 412 78 HOH HOH . K 6 HOH A 39 413 79 HOH HOH . K 6 HOH A 40 414 81 HOH HOH . K 6 HOH A 41 415 82 HOH HOH . K 6 HOH A 42 416 84 HOH HOH . K 6 HOH A 43 417 89 HOH HOH . K 6 HOH A 44 418 91 HOH HOH . K 6 HOH A 45 419 92 HOH HOH . K 6 HOH A 46 420 93 HOH HOH . K 6 HOH A 47 421 97 HOH HOH . L 6 HOH C 1 377 5 HOH HOH . L 6 HOH C 2 378 9 HOH HOH . L 6 HOH C 3 379 10 HOH HOH . L 6 HOH C 4 380 11 HOH HOH . L 6 HOH C 5 381 13 HOH HOH . L 6 HOH C 6 382 14 HOH HOH . L 6 HOH C 7 383 15 HOH HOH . L 6 HOH C 8 384 16 HOH HOH . L 6 HOH C 9 385 17 HOH HOH . L 6 HOH C 10 386 18 HOH HOH . L 6 HOH C 11 387 20 HOH HOH . L 6 HOH C 12 388 24 HOH HOH . L 6 HOH C 13 389 25 HOH HOH . L 6 HOH C 14 390 26 HOH HOH . L 6 HOH C 15 391 27 HOH HOH . L 6 HOH C 16 392 28 HOH HOH . L 6 HOH C 17 393 29 HOH HOH . L 6 HOH C 18 394 30 HOH HOH . L 6 HOH C 19 395 34 HOH HOH . L 6 HOH C 20 396 36 HOH HOH . L 6 HOH C 21 397 37 HOH HOH . L 6 HOH C 22 398 38 HOH HOH . L 6 HOH C 23 399 39 HOH HOH . L 6 HOH C 24 400 43 HOH HOH . L 6 HOH C 25 401 46 HOH HOH . L 6 HOH C 26 402 47 HOH HOH . L 6 HOH C 27 403 49 HOH HOH . L 6 HOH C 28 404 52 HOH HOH . L 6 HOH C 29 405 54 HOH HOH . L 6 HOH C 30 406 55 HOH HOH . L 6 HOH C 31 407 60 HOH HOH . L 6 HOH C 32 408 61 HOH HOH . L 6 HOH C 33 409 64 HOH HOH . L 6 HOH C 34 410 65 HOH HOH . L 6 HOH C 35 411 67 HOH HOH . L 6 HOH C 36 412 68 HOH HOH . L 6 HOH C 37 413 75 HOH HOH . L 6 HOH C 38 414 80 HOH HOH . L 6 HOH C 39 415 83 HOH HOH . L 6 HOH C 40 416 85 HOH HOH . L 6 HOH C 41 417 86 HOH HOH . L 6 HOH C 42 418 87 HOH HOH . L 6 HOH C 43 419 88 HOH HOH . L 6 HOH C 44 420 90 HOH HOH . L 6 HOH C 45 421 94 HOH HOH . L 6 HOH C 46 422 95 HOH HOH . L 6 HOH C 47 423 96 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 3 _atom_site.Cartn_x -47.226 _atom_site.Cartn_y -37.121 _atom_site.Cartn_z -49.06 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 50.86 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 375 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #