data_3SEU # _model_server_result.job_id SFj7cA_wW0Lz_iKQUDJXvg _model_server_result.datetime_utc '2024-10-13 00:19:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3seu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":382}' # _entry.id 3SEU # _exptl.entry_id 3SEU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.34 _cell.angle_gamma 90 _cell.entry_id 3SEU _cell.length_a 49.5 _cell.length_b 61.19 _cell.length_c 59.76 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SEU _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B GLC 1 B 1 GLC B 5044 MAL 2 n B GLC 2 B 2 GLC B 5044 MAL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O4 GLC . B GLC 1 1_555 B C1 GLC . B GLC 2 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.412 sing covale ? covale2 B O4 GLC . B GLC 1 1_555 B C1 GLC . B GLC 2 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.411 sing metalc ? metalc1 A OE2 GLU 39 A GLU 39 1_555 J ZN ZN . A ZN 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc2 A O HIS 40 A HIS 40 1_555 G ZN ZN . A ZN 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc3 A ND1 HIS 40 A HIS 40 1_555 G ZN ZN . A ZN 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc4 A OD2 ASP 83 A ASP 83 1_555 I ZN ZN . A ZN 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc5 A NE2 HIS 204 A HIS 204 1_555 D ZN ZN . A ZN 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc6 A OD2 ASP 208 A ASP 208 1_555 F ZN ZN . A ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc7 A OD1 ASP 208 A ASP 208 1_555 F ZN ZN . A ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc8 A NE2 HIS 216 A HIS 216 1_555 C ZN ZN . A ZN 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc9 A NE2 HIS 220 A HIS 220 1_555 E ZN ZN . A ZN 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc10 A OE2 GLU 222 A GLU 222 1_555 C ZN ZN . A ZN 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc11 E ZN ZN . A ZN 375 1_555 M OXT ACT . A ACT 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc12 E ZN ZN . A ZN 375 1_555 N O ACT . A ACT 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc13 I ZN ZN . A ZN 379 1_555 R O HOH . A HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc14 J ZN ZN . A ZN 380 1_555 P OXT ACT . A ACT 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 3SEU _atom_sites.fract_transf_matrix[1][1] 0.020202 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007089 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016343 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017734 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 373 1 ZN ZN . D 3 ZN A 1 374 2 ZN ZN . E 3 ZN A 1 375 3 ZN ZN . F 3 ZN A 1 376 4 ZN ZN . G 3 ZN A 1 377 5 ZN ZN . H 3 ZN A 1 378 6 ZN ZN . I 3 ZN A 1 379 7 ZN ZN . J 3 ZN A 1 380 8 ZN ZN . K 4 ACT A 1 381 1 ACT ACT . L 4 ACT A 1 382 1 ACT ACT . M 4 ACT A 1 383 1 ACT ACT . N 4 ACT A 1 384 1 ACT ACT . O 4 ACT A 1 385 1 ACT ACT . P 4 ACT A 1 386 1 ACT ACT . Q 5 GOL A 1 387 1 GOL GOL . R 6 HOH A 1 388 1 HOH HOH . R 6 HOH A 2 389 3 HOH HOH . R 6 HOH A 3 390 4 HOH HOH . R 6 HOH A 4 391 5 HOH HOH . R 6 HOH A 5 392 6 HOH HOH . R 6 HOH A 6 393 7 HOH HOH . R 6 HOH A 7 394 8 HOH HOH . R 6 HOH A 8 395 9 HOH HOH . R 6 HOH A 9 396 10 HOH HOH . R 6 HOH A 10 397 11 HOH HOH . R 6 HOH A 11 398 12 HOH HOH . R 6 HOH A 12 399 13 HOH HOH . R 6 HOH A 13 400 14 HOH HOH . R 6 HOH A 14 401 15 HOH HOH . R 6 HOH A 15 402 16 HOH HOH . R 6 HOH A 16 403 17 HOH HOH . R 6 HOH A 17 404 18 HOH HOH . R 6 HOH A 18 405 19 HOH HOH . R 6 HOH A 19 406 20 HOH HOH . R 6 HOH A 20 407 21 HOH HOH . R 6 HOH A 21 408 23 HOH HOH . R 6 HOH A 22 409 24 HOH HOH . R 6 HOH A 23 410 25 HOH HOH . R 6 HOH A 24 411 26 HOH HOH . R 6 HOH A 25 412 27 HOH HOH . R 6 HOH A 26 413 28 HOH HOH . R 6 HOH A 27 414 30 HOH HOH . R 6 HOH A 28 415 31 HOH HOH . R 6 HOH A 29 416 32 HOH HOH . R 6 HOH A 30 417 33 HOH HOH . R 6 HOH A 31 418 34 HOH HOH . R 6 HOH A 32 419 35 HOH HOH . R 6 HOH A 33 420 36 HOH HOH . R 6 HOH A 34 421 38 HOH HOH . R 6 HOH A 35 422 39 HOH HOH . R 6 HOH A 36 423 41 HOH HOH . R 6 HOH A 37 424 42 HOH HOH . R 6 HOH A 38 425 43 HOH HOH . R 6 HOH A 39 426 44 HOH HOH . R 6 HOH A 40 427 45 HOH HOH . R 6 HOH A 41 428 46 HOH HOH . R 6 HOH A 42 429 47 HOH HOH . R 6 HOH A 43 430 48 HOH HOH . R 6 HOH A 44 431 49 HOH HOH . R 6 HOH A 45 432 50 HOH HOH . R 6 HOH A 46 433 51 HOH HOH . R 6 HOH A 47 434 52 HOH HOH . R 6 HOH A 48 435 53 HOH HOH . R 6 HOH A 49 436 54 HOH HOH . R 6 HOH A 50 437 55 HOH HOH . R 6 HOH A 51 438 56 HOH HOH . R 6 HOH A 52 439 57 HOH HOH . R 6 HOH A 53 440 59 HOH HOH . R 6 HOH A 54 441 60 HOH HOH . R 6 HOH A 55 442 61 HOH HOH . R 6 HOH A 56 443 63 HOH HOH . R 6 HOH A 57 444 64 HOH HOH . R 6 HOH A 58 445 65 HOH HOH . R 6 HOH A 59 446 66 HOH HOH . R 6 HOH A 60 447 67 HOH HOH . R 6 HOH A 61 448 68 HOH HOH . R 6 HOH A 62 449 69 HOH HOH . R 6 HOH A 63 450 70 HOH HOH . R 6 HOH A 64 451 71 HOH HOH . R 6 HOH A 65 452 72 HOH HOH . R 6 HOH A 66 453 74 HOH HOH . R 6 HOH A 67 454 75 HOH HOH . R 6 HOH A 68 455 76 HOH HOH . R 6 HOH A 69 456 77 HOH HOH . R 6 HOH A 70 457 78 HOH HOH . R 6 HOH A 71 458 79 HOH HOH . R 6 HOH A 72 459 80 HOH HOH . R 6 HOH A 73 460 81 HOH HOH . R 6 HOH A 74 461 82 HOH HOH . R 6 HOH A 75 462 83 HOH HOH . R 6 HOH A 76 463 84 HOH HOH . R 6 HOH A 77 464 85 HOH HOH . R 6 HOH A 78 465 86 HOH HOH . R 6 HOH A 79 466 87 HOH HOH . R 6 HOH A 80 467 88 HOH HOH . R 6 HOH A 81 468 89 HOH HOH . R 6 HOH A 82 469 90 HOH HOH . R 6 HOH A 83 470 91 HOH HOH . R 6 HOH A 84 471 92 HOH HOH . R 6 HOH A 85 472 93 HOH HOH . R 6 HOH A 86 473 94 HOH HOH . R 6 HOH A 87 474 95 HOH HOH . R 6 HOH A 88 475 96 HOH HOH . R 6 HOH A 89 476 97 HOH HOH . R 6 HOH A 90 477 98 HOH HOH . R 6 HOH A 91 478 99 HOH HOH . R 6 HOH A 92 479 100 HOH HOH . R 6 HOH A 93 480 101 HOH HOH . R 6 HOH A 94 481 102 HOH HOH . R 6 HOH A 95 482 103 HOH HOH . R 6 HOH A 96 483 104 HOH HOH . R 6 HOH A 97 484 105 HOH HOH . R 6 HOH A 98 485 106 HOH HOH . R 6 HOH A 99 486 107 HOH HOH . R 6 HOH A 100 487 108 HOH HOH . R 6 HOH A 101 488 109 HOH HOH . R 6 HOH A 102 489 110 HOH HOH . R 6 HOH A 103 490 111 HOH HOH . R 6 HOH A 104 491 112 HOH HOH . R 6 HOH A 105 492 113 HOH HOH . R 6 HOH A 106 493 114 HOH HOH . R 6 HOH A 107 494 116 HOH HOH . R 6 HOH A 108 495 117 HOH HOH . R 6 HOH A 109 496 118 HOH HOH . R 6 HOH A 110 497 119 HOH HOH . R 6 HOH A 111 498 120 HOH HOH . R 6 HOH A 112 499 121 HOH HOH . R 6 HOH A 113 500 122 HOH HOH . R 6 HOH A 114 501 124 HOH HOH . R 6 HOH A 115 502 125 HOH HOH . R 6 HOH A 116 503 126 HOH HOH . R 6 HOH A 117 504 127 HOH HOH . R 6 HOH A 118 505 128 HOH HOH . R 6 HOH A 119 506 129 HOH HOH . R 6 HOH A 120 507 131 HOH HOH . R 6 HOH A 121 508 132 HOH HOH . R 6 HOH A 122 509 133 HOH HOH . R 6 HOH A 123 510 134 HOH HOH . R 6 HOH A 124 511 135 HOH HOH . R 6 HOH A 125 512 136 HOH HOH . R 6 HOH A 126 513 137 HOH HOH . R 6 HOH A 127 514 138 HOH HOH . R 6 HOH A 128 515 139 HOH HOH . R 6 HOH A 129 516 140 HOH HOH . R 6 HOH A 130 517 141 HOH HOH . R 6 HOH A 131 518 142 HOH HOH . R 6 HOH A 132 519 143 HOH HOH . R 6 HOH A 133 520 144 HOH HOH . R 6 HOH A 134 521 145 HOH HOH . R 6 HOH A 135 522 146 HOH HOH . R 6 HOH A 136 523 147 HOH HOH . R 6 HOH A 137 524 148 HOH HOH . R 6 HOH A 138 525 149 HOH HOH . R 6 HOH A 139 526 150 HOH HOH . R 6 HOH A 140 527 151 HOH HOH . R 6 HOH A 141 528 152 HOH HOH . R 6 HOH A 142 529 153 HOH HOH . R 6 HOH A 143 530 154 HOH HOH . R 6 HOH A 144 531 155 HOH HOH . R 6 HOH A 145 532 156 HOH HOH . R 6 HOH A 146 533 157 HOH HOH . R 6 HOH A 147 534 158 HOH HOH . R 6 HOH A 148 535 159 HOH HOH . R 6 HOH A 149 536 160 HOH HOH . R 6 HOH A 150 537 161 HOH HOH . R 6 HOH A 151 538 162 HOH HOH . R 6 HOH A 152 539 163 HOH HOH . R 6 HOH A 153 540 164 HOH HOH . R 6 HOH A 154 541 165 HOH HOH . R 6 HOH A 155 542 166 HOH HOH . R 6 HOH A 156 543 167 HOH HOH . R 6 HOH A 157 544 168 HOH HOH . R 6 HOH A 158 545 169 HOH HOH . R 6 HOH A 159 546 170 HOH HOH . R 6 HOH A 160 547 171 HOH HOH . R 6 HOH A 161 548 172 HOH HOH . R 6 HOH A 162 549 173 HOH HOH . R 6 HOH A 163 550 174 HOH HOH . R 6 HOH A 164 551 175 HOH HOH . R 6 HOH A 165 552 177 HOH HOH . R 6 HOH A 166 553 179 HOH HOH . R 6 HOH A 167 554 180 HOH HOH . R 6 HOH A 168 555 181 HOH HOH . R 6 HOH A 169 556 182 HOH HOH . R 6 HOH A 170 557 183 HOH HOH . R 6 HOH A 171 558 184 HOH HOH . R 6 HOH A 172 559 185 HOH HOH . R 6 HOH A 173 560 186 HOH HOH . R 6 HOH A 174 561 187 HOH HOH . R 6 HOH A 175 562 188 HOH HOH . R 6 HOH A 176 563 189 HOH HOH . R 6 HOH A 177 564 190 HOH HOH . R 6 HOH A 178 565 191 HOH HOH . R 6 HOH A 179 566 192 HOH HOH . R 6 HOH A 180 567 193 HOH HOH . R 6 HOH A 181 568 194 HOH HOH . R 6 HOH A 182 569 195 HOH HOH . R 6 HOH A 183 570 196 HOH HOH . R 6 HOH A 184 571 197 HOH HOH . R 6 HOH A 185 572 198 HOH HOH . R 6 HOH A 186 573 199 HOH HOH . R 6 HOH A 187 574 200 HOH HOH . R 6 HOH A 188 575 201 HOH HOH . R 6 HOH A 189 576 202 HOH HOH . R 6 HOH A 190 577 203 HOH HOH . R 6 HOH A 191 578 204 HOH HOH . R 6 HOH A 192 579 205 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . L 4 -5.18 -13.128 32.583 1 28.77 ? C ACT 382 A 1 HETATM 2 O O ACT . . . L 4 -4.422 -12.415 33.265 1 27.34 ? O ACT 382 A 1 HETATM 3 O OXT ACT . . . L 4 -5.962 -12.525 31.83 1 30.49 ? OXT ACT 382 A 1 HETATM 4 C CH3 ACT . . . L 4 -5.147 -14.615 32.67 1 27.2 ? CH3 ACT 382 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #