data_3SFE
#
_model_server_result.job_id            Q6ivS26CI6QphhZAXXey4A 
_model_server_result.datetime_utc      '2024-11-06 23:36:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3sfe 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":303}' 
#
_entry.id    3SFE 
#
_exptl.entry_id    3SFE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              351.64 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IRON/SULFUR CLUSTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3SFE 
_cell.length_a            70.71 
_cell.length_b            83.42 
_cell.length_c            294.01 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3SFE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      8 
_struct_asym.id                             H 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NE2 HIS 57 A HIS 57 1_555 E C8M FAD . A FAD 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? 
metalc ? metalc1 B SG CYS 65 B CYS 65 1_555 G FE2 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? 
metalc ? metalc2 B SG CYS 70 B CYS 70 1_555 G FE2 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc3 B SG CYS 73 B CYS 73 1_555 G FE1 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
metalc ? metalc4 B SG CYS 85 B CYS 85 1_555 G FE1 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? 
metalc ? metalc5 B SG CYS 158 B CYS 158 1_555 H FE1 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc6 B SG CYS 161 B CYS 161 1_555 H FE2 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? 
metalc ? metalc7 B SG CYS 164 B CYS 164 1_555 H FE4 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? 
metalc ? metalc8 B SG CYS 168 B CYS 168 1_555 I FE3 F3S . B F3S 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? 
metalc ? metalc9 B SG CYS 215 B CYS 215 1_555 I FE1 F3S . B F3S 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? 
metalc ? metalc10 B SG CYS 221 B CYS 221 1_555 I FE4 F3S . B F3S 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? 
metalc ? metalc11 B SG CYS 225 B CYS 225 1_555 H FE3 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? 
metalc ? metalc12 C NE2 HIS 98 C HIS 101 1_555 J FE HEM . C HEM 1305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? 
metalc ? metalc13 J FE HEM . C HEM 1305 1_555 D NE2 HIS 46 D HIS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
#
_chem_comp.formula           'Fe4 S4' 
_chem_comp.formula_weight    351.64 
_chem_comp.id                SF4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IRON/SULFUR CLUSTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE1 S2 SF4 sing 487 n n 
FE1 S3 SF4 sing 488 n n 
FE1 S4 SF4 sing 489 n n 
FE2 S1 SF4 sing 490 n n 
FE2 S3 SF4 sing 491 n n 
FE2 S4 SF4 sing 492 n n 
FE3 S1 SF4 sing 493 n n 
FE3 S2 SF4 sing 494 n n 
FE3 S4 SF4 sing 495 n n 
FE4 S1 SF4 sing 496 n n 
FE4 S2 SF4 sing 497 n n 
FE4 S3 SF4 sing 498 n n 
#
_atom_sites.entry_id                     3SFE 
_atom_sites.fract_transf_matrix[1][1]    0.014142 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011988 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003401 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 FAD A 1 700 700 FAD FAD . 
F 6 OAA A 1 701 701 OAA OAA . 
G 7 FES B 1 302 302 FES FES . 
H 8 SF4 B 1 303 303 SF4 FS4 . 
I 9 F3S B 1 304 304 F3S FS3 . 
J 10 HEM C 1 1305 1305 HEM HEM . 
K 11 TMG C 1 1 1 TMG TBZ . 
L 12 HOH A 1 623 1 HOH HOH . 
L 12 HOH A 2 624 2 HOH HOH . 
L 12 HOH A 3 625 3 HOH HOH . 
L 12 HOH A 4 626 6 HOH HOH . 
L 12 HOH A 5 627 11 HOH HOH . 
L 12 HOH A 6 628 13 HOH HOH . 
L 12 HOH A 7 629 16 HOH HOH . 
L 12 HOH A 8 630 17 HOH HOH . 
L 12 HOH A 9 631 19 HOH HOH . 
L 12 HOH A 10 632 26 HOH HOH . 
L 12 HOH A 11 633 27 HOH HOH . 
L 12 HOH A 12 634 34 HOH HOH . 
L 12 HOH A 13 635 35 HOH HOH . 
L 12 HOH A 14 636 37 HOH HOH . 
L 12 HOH A 15 637 40 HOH HOH . 
L 12 HOH A 16 638 42 HOH HOH . 
L 12 HOH A 17 639 44 HOH HOH . 
L 12 HOH A 18 640 45 HOH HOH . 
L 12 HOH A 19 641 46 HOH HOH . 
L 12 HOH A 20 642 47 HOH HOH . 
L 12 HOH A 21 643 50 HOH HOH . 
L 12 HOH A 22 644 52 HOH HOH . 
M 12 HOH B 1 253 4 HOH HOH . 
M 12 HOH B 2 254 7 HOH HOH . 
M 12 HOH B 3 255 8 HOH HOH . 
M 12 HOH B 4 256 10 HOH HOH . 
M 12 HOH B 5 257 12 HOH HOH . 
M 12 HOH B 6 258 14 HOH HOH . 
M 12 HOH B 7 259 22 HOH HOH . 
M 12 HOH B 8 260 24 HOH HOH . 
M 12 HOH B 9 261 30 HOH HOH . 
M 12 HOH B 10 262 36 HOH HOH . 
M 12 HOH B 11 263 43 HOH HOH . 
M 12 HOH B 12 264 48 HOH HOH . 
N 12 HOH C 1 144 5 HOH HOH . 
N 12 HOH C 2 145 9 HOH HOH . 
N 12 HOH C 3 146 23 HOH HOH . 
N 12 HOH C 4 147 25 HOH HOH . 
N 12 HOH C 5 148 28 HOH HOH . 
N 12 HOH C 6 149 31 HOH HOH . 
N 12 HOH C 7 150 32 HOH HOH . 
N 12 HOH C 8 151 38 HOH HOH . 
N 12 HOH C 9 152 39 HOH HOH . 
N 12 HOH C 10 153 49 HOH HOH . 
O 12 HOH D 1 15 15 HOH HOH . 
O 12 HOH D 2 18 18 HOH HOH . 
O 12 HOH D 3 20 20 HOH HOH . 
O 12 HOH D 4 21 21 HOH HOH . 
O 12 HOH D 5 29 29 HOH HOH . 
O 12 HOH D 6 33 33 HOH HOH . 
O 12 HOH D 7 137 41 HOH HOH . 
O 12 HOH D 8 138 51 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE1 SF4 . . . H 8 84.221 58.663 106.059 1 38.57 ? FE1 SF4 303 B 1 
HETATM 2 FE FE2 SF4 . . . H 8 86.516 58.001 104.898 1 39.51 ? FE2 SF4 303 B 1 
HETATM 3 FE FE3 SF4 . . . H 8 84.236 56.708 104.101 1 40.12 ? FE3 SF4 303 B 1 
HETATM 4 FE FE4 SF4 . . . H 8 84.601 59.348 103.52 1 37.66 ? FE4 SF4 303 B 1 
HETATM 5 S S1 SF4 . . . H 8 85.845 57.577 102.729 1 39.16 ? S1 SF4 303 B 1 
HETATM 6 S S2 SF4 . . . H 8 82.686 58.392 104.354 1 38.24 ? S2 SF4 303 B 1 
HETATM 7 S S3 SF4 . . . H 8 85.81 60.155 105.302 1 37.55 ? S3 SF4 303 B 1 
HETATM 8 S S4 SF4 . . . H 8 85.222 56.587 106.177 1 39.16 ? S4 SF4 303 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#