data_3SHB # _model_server_result.job_id uOtbinlBYc_gSC6AuQ5MbA _model_server_result.datetime_utc '2025-03-06 07:53:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3shb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1004}' # _entry.id 3SHB # _exptl.entry_id 3SHB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3SHB _cell.length_a 36.609 _cell.length_b 36.609 _cell.length_c 219.765 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SHB _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 13 A CYS 315 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc2 A SG CYS 16 A CYS 318 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc3 A SG CYS 24 A CYS 326 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc4 A SG CYS 27 A CYS 329 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc5 A SG CYS 29 A CYS 331 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc6 A NE2 HIS 30 A HIS 332 1_555 F ZN ZN . A ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc7 A SG CYS 32 A CYS 334 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc8 A SG CYS 44 A CYS 346 1_555 E ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc9 A SG CYS 47 A CYS 349 1_555 E ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc10 A ND1 HIS 52 A HIS 354 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc11 A SG CYS 55 A CYS 357 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc12 A SG CYS 71 A CYS 373 1_555 E ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc13 A OE2 GLU 73 A GLU 375 1_555 F ZN ZN . A ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc14 A OE1 GLU 73 A GLU 375 1_555 F ZN ZN . A ZN 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc15 A SG CYS 74 A CYS 376 1_555 E ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3SHB _atom_sites.fract_transf_matrix[1][1] 0.027316 _atom_sites.fract_transf_matrix[1][2] 0.015771 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.031541 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00455 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 1001 1001 ZN ZN . D 3 ZN A 1 1002 1002 ZN ZN . E 3 ZN A 1 1003 1003 ZN ZN . F 3 ZN A 1 1004 1004 ZN ZN . G 4 HOH A 1 2001 2001 HOH HOH . G 4 HOH A 2 2002 2002 HOH HOH . G 4 HOH A 3 2003 2003 HOH HOH . G 4 HOH A 4 2005 2005 HOH HOH . G 4 HOH A 5 2006 2006 HOH HOH . G 4 HOH A 6 2007 2007 HOH HOH . G 4 HOH A 7 2008 2008 HOH HOH . G 4 HOH A 8 2009 2009 HOH HOH . G 4 HOH A 9 2010 2010 HOH HOH . G 4 HOH A 10 2011 2011 HOH HOH . G 4 HOH A 11 2012 2012 HOH HOH . G 4 HOH A 12 2013 2013 HOH HOH . G 4 HOH A 13 2014 2014 HOH HOH . G 4 HOH A 14 2015 2015 HOH HOH . G 4 HOH A 15 2016 2016 HOH HOH . G 4 HOH A 16 2017 2017 HOH HOH . G 4 HOH A 17 2019 2019 HOH HOH . G 4 HOH A 18 2020 2020 HOH HOH . G 4 HOH A 19 2021 2021 HOH HOH . G 4 HOH A 20 2022 2022 HOH HOH . G 4 HOH A 21 2023 2023 HOH HOH . G 4 HOH A 22 2024 2024 HOH HOH . G 4 HOH A 23 2025 2025 HOH HOH . G 4 HOH A 24 2026 2026 HOH HOH . G 4 HOH A 25 2027 2027 HOH HOH . G 4 HOH A 26 2029 2029 HOH HOH . G 4 HOH A 27 2030 2030 HOH HOH . G 4 HOH A 28 2031 2031 HOH HOH . G 4 HOH A 29 2033 2033 HOH HOH . G 4 HOH A 30 2034 2034 HOH HOH . G 4 HOH A 31 2035 2035 HOH HOH . G 4 HOH A 32 2036 2036 HOH HOH . G 4 HOH A 33 2037 2037 HOH HOH . G 4 HOH A 34 2038 2038 HOH HOH . G 4 HOH A 35 2039 2039 HOH HOH . G 4 HOH A 36 2040 2040 HOH HOH . G 4 HOH A 37 2041 2041 HOH HOH . G 4 HOH A 38 2042 2042 HOH HOH . G 4 HOH A 39 2043 2043 HOH HOH . G 4 HOH A 40 2044 2044 HOH HOH . G 4 HOH A 41 2045 2045 HOH HOH . G 4 HOH A 42 2046 2046 HOH HOH . G 4 HOH A 43 2047 2047 HOH HOH . G 4 HOH A 44 2048 2048 HOH HOH . G 4 HOH A 45 2049 2049 HOH HOH . G 4 HOH A 46 2050 2050 HOH HOH . G 4 HOH A 47 2051 2051 HOH HOH . G 4 HOH A 48 2052 2052 HOH HOH . G 4 HOH A 49 2053 2053 HOH HOH . G 4 HOH A 50 2054 2054 HOH HOH . G 4 HOH A 51 2055 2055 HOH HOH . G 4 HOH A 52 2057 2057 HOH HOH . G 4 HOH A 53 2058 2058 HOH HOH . G 4 HOH A 54 2059 2059 HOH HOH . G 4 HOH A 55 2060 2060 HOH HOH . G 4 HOH A 56 2061 2061 HOH HOH . G 4 HOH A 57 2062 2062 HOH HOH . G 4 HOH A 58 2063 2063 HOH HOH . G 4 HOH A 59 2064 2064 HOH HOH . G 4 HOH A 60 2065 2065 HOH HOH . G 4 HOH A 61 2066 2066 HOH HOH . H 4 HOH B 1 2004 2004 HOH HOH . H 4 HOH B 2 2018 2018 HOH HOH . H 4 HOH B 3 2028 2028 HOH HOH . H 4 HOH B 4 2032 2032 HOH HOH . H 4 HOH B 5 2056 2056 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x -5.8 _atom_site.Cartn_y 0 _atom_site.Cartn_z 0 _atom_site.occupancy 0.85 _atom_site.B_iso_or_equiv 35.95 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1004 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #