data_3SJN # _model_server_result.job_id T7yfwnqltgMKHdLTtDcS0A _model_server_result.datetime_utc '2025-01-11 15:49:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3sjn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":374}' # _entry.id 3SJN # _exptl.entry_id 3SJN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3SJN _cell.length_a 109.207 _cell.length_b 109.207 _cell.length_c 141.034 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SJN _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_445 -x-1,-y-1,z -1 0 0 0 -1 0 0 0 1 -109.207 -109.207 0 3 'crystal symmetry operation' 3_455 -y-1,x,z 0 -1 0 1 0 0 0 0 1 -109.207 0 0 4 'crystal symmetry operation' 4_545 y,-x-1,z 0 1 0 -1 0 0 0 0 1 0 -109.207 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 199 A ASP 198 1_555 C MG MG . A MG 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc2 A OE2 GLU 226 A GLU 225 1_555 C MG MG . A MG 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc3 A OE1 GLU 252 A GLU 251 1_555 C MG MG . A MG 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc4 C MG MG . A MG 374 1_555 H O HOH . A HOH 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc5 C MG MG . A MG 374 1_555 H O HOH . A HOH 489 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.846 ? metalc ? metalc6 C MG MG . A MG 374 1_555 H O HOH . A HOH 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.901 ? metalc ? metalc7 B OD2 ASP 199 B ASP 198 1_555 F MG MG . B MG 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc8 B OE2 GLU 226 B GLU 225 1_555 F MG MG . B MG 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc9 B OE1 GLU 252 B GLU 251 1_555 F MG MG . B MG 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc10 F MG MG . B MG 374 1_555 I O HOH . B HOH 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc11 F MG MG . B MG 374 1_555 I O HOH . B HOH 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc12 F MG MG . B MG 374 1_555 I O HOH . B HOH 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3SJN _atom_sites.fract_transf_matrix[1][1] 0.009157 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009157 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00709 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 374 1 MG MG . D 3 UNL A 1 375 1 UNL UNL . E 4 GOL A 1 376 1 GOL GOL . F 2 MG B 1 374 1 MG MG . G 3 UNL B 1 375 1 UNL UNL . H 5 HOH A 1 377 2 HOH HOH . H 5 HOH A 2 378 4 HOH HOH . H 5 HOH A 3 379 5 HOH HOH . H 5 HOH A 4 380 12 HOH HOH . H 5 HOH A 5 381 15 HOH HOH . H 5 HOH A 6 382 16 HOH HOH . H 5 HOH A 7 383 21 HOH HOH . H 5 HOH A 8 384 22 HOH HOH . H 5 HOH A 9 385 24 HOH HOH . H 5 HOH A 10 386 26 HOH HOH . H 5 HOH A 11 387 27 HOH HOH . H 5 HOH A 12 388 28 HOH HOH . H 5 HOH A 13 389 29 HOH HOH . H 5 HOH A 14 390 30 HOH HOH . H 5 HOH A 15 391 32 HOH HOH . H 5 HOH A 16 392 33 HOH HOH . H 5 HOH A 17 393 34 HOH HOH . H 5 HOH A 18 394 38 HOH HOH . H 5 HOH A 19 395 39 HOH HOH . H 5 HOH A 20 396 40 HOH HOH . H 5 HOH A 21 397 42 HOH HOH . H 5 HOH A 22 398 43 HOH HOH . H 5 HOH A 23 399 45 HOH HOH . H 5 HOH A 24 400 49 HOH HOH . H 5 HOH A 25 401 50 HOH HOH . H 5 HOH A 26 402 61 HOH HOH . H 5 HOH A 27 403 63 HOH HOH . H 5 HOH A 28 404 64 HOH HOH . H 5 HOH A 29 405 65 HOH HOH . H 5 HOH A 30 406 66 HOH HOH . H 5 HOH A 31 407 69 HOH HOH . H 5 HOH A 32 408 70 HOH HOH . H 5 HOH A 33 409 71 HOH HOH . H 5 HOH A 34 410 74 HOH HOH . H 5 HOH A 35 411 80 HOH HOH . H 5 HOH A 36 412 81 HOH HOH . H 5 HOH A 37 413 82 HOH HOH . H 5 HOH A 38 414 86 HOH HOH . H 5 HOH A 39 415 87 HOH HOH . H 5 HOH A 40 416 91 HOH HOH . H 5 HOH A 41 417 95 HOH HOH . H 5 HOH A 42 418 98 HOH HOH . H 5 HOH A 43 419 100 HOH HOH . H 5 HOH A 44 420 102 HOH HOH . H 5 HOH A 45 421 103 HOH HOH . H 5 HOH A 46 422 106 HOH HOH . H 5 HOH A 47 423 112 HOH HOH . H 5 HOH A 48 424 114 HOH HOH . H 5 HOH A 49 425 115 HOH HOH . H 5 HOH A 50 426 117 HOH HOH . H 5 HOH A 51 427 119 HOH HOH . H 5 HOH A 52 428 121 HOH HOH . H 5 HOH A 53 429 125 HOH HOH . H 5 HOH A 54 430 127 HOH HOH . H 5 HOH A 55 431 133 HOH HOH . H 5 HOH A 56 432 137 HOH HOH . H 5 HOH A 57 433 147 HOH HOH . H 5 HOH A 58 434 148 HOH HOH . H 5 HOH A 59 435 151 HOH HOH . H 5 HOH A 60 436 153 HOH HOH . H 5 HOH A 61 437 155 HOH HOH . H 5 HOH A 62 438 158 HOH HOH . H 5 HOH A 63 439 160 HOH HOH . H 5 HOH A 64 440 161 HOH HOH . H 5 HOH A 65 441 162 HOH HOH . H 5 HOH A 66 442 163 HOH HOH . H 5 HOH A 67 443 167 HOH HOH . H 5 HOH A 68 444 168 HOH HOH . H 5 HOH A 69 445 169 HOH HOH . H 5 HOH A 70 446 170 HOH HOH . H 5 HOH A 71 447 171 HOH HOH . H 5 HOH A 72 448 172 HOH HOH . H 5 HOH A 73 449 178 HOH HOH . H 5 HOH A 74 450 179 HOH HOH . H 5 HOH A 75 451 181 HOH HOH . H 5 HOH A 76 452 182 HOH HOH . H 5 HOH A 77 453 185 HOH HOH . H 5 HOH A 78 454 187 HOH HOH . H 5 HOH A 79 455 189 HOH HOH . H 5 HOH A 80 456 193 HOH HOH . H 5 HOH A 81 457 194 HOH HOH . H 5 HOH A 82 458 195 HOH HOH . H 5 HOH A 83 459 197 HOH HOH . H 5 HOH A 84 460 199 HOH HOH . H 5 HOH A 85 461 200 HOH HOH . H 5 HOH A 86 462 201 HOH HOH . H 5 HOH A 87 463 202 HOH HOH . H 5 HOH A 88 464 203 HOH HOH . H 5 HOH A 89 465 205 HOH HOH . H 5 HOH A 90 466 211 HOH HOH . H 5 HOH A 91 467 214 HOH HOH . H 5 HOH A 92 468 218 HOH HOH . H 5 HOH A 93 469 221 HOH HOH . H 5 HOH A 94 470 222 HOH HOH . H 5 HOH A 95 471 225 HOH HOH . H 5 HOH A 96 472 227 HOH HOH . H 5 HOH A 97 473 228 HOH HOH . H 5 HOH A 98 474 229 HOH HOH . H 5 HOH A 99 475 230 HOH HOH . H 5 HOH A 100 476 270 HOH HOH . H 5 HOH A 101 477 271 HOH HOH . H 5 HOH A 102 478 273 HOH HOH . H 5 HOH A 103 479 274 HOH HOH . H 5 HOH A 104 480 275 HOH HOH . H 5 HOH A 105 481 281 HOH HOH . H 5 HOH A 106 482 282 HOH HOH . H 5 HOH A 107 483 284 HOH HOH . H 5 HOH A 108 484 285 HOH HOH . H 5 HOH A 109 485 286 HOH HOH . H 5 HOH A 110 486 292 HOH HOH . H 5 HOH A 111 487 294 HOH HOH . H 5 HOH A 112 488 295 HOH HOH . H 5 HOH A 113 489 296 HOH HOH . H 5 HOH A 114 490 297 HOH HOH . H 5 HOH A 115 491 298 HOH HOH . H 5 HOH A 116 492 299 HOH HOH . H 5 HOH A 117 493 300 HOH HOH . H 5 HOH A 118 494 301 HOH HOH . H 5 HOH A 119 495 309 HOH HOH . H 5 HOH A 120 496 310 HOH HOH . H 5 HOH A 121 497 311 HOH HOH . H 5 HOH A 122 498 312 HOH HOH . H 5 HOH A 123 499 313 HOH HOH . H 5 HOH A 124 500 330 HOH HOH . H 5 HOH A 125 501 334 HOH HOH . H 5 HOH A 126 502 335 HOH HOH . H 5 HOH A 127 503 336 HOH HOH . H 5 HOH A 128 504 337 HOH HOH . H 5 HOH A 129 505 338 HOH HOH . H 5 HOH A 130 506 176 HOH HOH . I 5 HOH B 1 376 6 HOH HOH . I 5 HOH B 2 377 7 HOH HOH . I 5 HOH B 3 378 8 HOH HOH . I 5 HOH B 4 379 9 HOH HOH . I 5 HOH B 5 380 10 HOH HOH . I 5 HOH B 6 381 11 HOH HOH . I 5 HOH B 7 382 13 HOH HOH . I 5 HOH B 8 383 17 HOH HOH . I 5 HOH B 9 384 18 HOH HOH . I 5 HOH B 10 385 23 HOH HOH . I 5 HOH B 11 386 25 HOH HOH . I 5 HOH B 12 387 31 HOH HOH . I 5 HOH B 13 388 35 HOH HOH . I 5 HOH B 14 389 36 HOH HOH . I 5 HOH B 15 390 41 HOH HOH . I 5 HOH B 16 391 44 HOH HOH . I 5 HOH B 17 392 46 HOH HOH . I 5 HOH B 18 393 47 HOH HOH . I 5 HOH B 19 394 51 HOH HOH . I 5 HOH B 20 395 52 HOH HOH . I 5 HOH B 21 396 53 HOH HOH . I 5 HOH B 22 397 55 HOH HOH . I 5 HOH B 23 398 56 HOH HOH . I 5 HOH B 24 399 57 HOH HOH . I 5 HOH B 25 400 59 HOH HOH . I 5 HOH B 26 401 62 HOH HOH . I 5 HOH B 27 402 72 HOH HOH . I 5 HOH B 28 403 73 HOH HOH . I 5 HOH B 29 404 75 HOH HOH . I 5 HOH B 30 405 76 HOH HOH . I 5 HOH B 31 406 83 HOH HOH . I 5 HOH B 32 407 84 HOH HOH . I 5 HOH B 33 408 89 HOH HOH . I 5 HOH B 34 409 90 HOH HOH . I 5 HOH B 35 410 92 HOH HOH . I 5 HOH B 36 411 94 HOH HOH . I 5 HOH B 37 412 99 HOH HOH . I 5 HOH B 38 413 101 HOH HOH . I 5 HOH B 39 414 104 HOH HOH . I 5 HOH B 40 415 107 HOH HOH . I 5 HOH B 41 416 108 HOH HOH . I 5 HOH B 42 417 109 HOH HOH . I 5 HOH B 43 418 120 HOH HOH . I 5 HOH B 44 419 122 HOH HOH . I 5 HOH B 45 420 124 HOH HOH . I 5 HOH B 46 421 126 HOH HOH . I 5 HOH B 47 422 128 HOH HOH . I 5 HOH B 48 423 130 HOH HOH . I 5 HOH B 49 424 132 HOH HOH . I 5 HOH B 50 425 135 HOH HOH . I 5 HOH B 51 426 140 HOH HOH . I 5 HOH B 52 427 141 HOH HOH . I 5 HOH B 53 428 144 HOH HOH . I 5 HOH B 54 429 149 HOH HOH . I 5 HOH B 55 430 150 HOH HOH . I 5 HOH B 56 431 157 HOH HOH . I 5 HOH B 57 432 159 HOH HOH . I 5 HOH B 58 433 164 HOH HOH . I 5 HOH B 59 434 165 HOH HOH . I 5 HOH B 60 435 173 HOH HOH . I 5 HOH B 61 437 180 HOH HOH . I 5 HOH B 62 438 188 HOH HOH . I 5 HOH B 63 439 190 HOH HOH . I 5 HOH B 64 440 191 HOH HOH . I 5 HOH B 65 441 192 HOH HOH . I 5 HOH B 66 442 207 HOH HOH . I 5 HOH B 67 443 212 HOH HOH . I 5 HOH B 68 444 233 HOH HOH . I 5 HOH B 69 445 235 HOH HOH . I 5 HOH B 70 446 236 HOH HOH . I 5 HOH B 71 447 238 HOH HOH . I 5 HOH B 72 448 239 HOH HOH . I 5 HOH B 73 449 241 HOH HOH . I 5 HOH B 74 450 244 HOH HOH . I 5 HOH B 75 451 245 HOH HOH . I 5 HOH B 76 452 246 HOH HOH . I 5 HOH B 77 453 247 HOH HOH . I 5 HOH B 78 454 248 HOH HOH . I 5 HOH B 79 455 250 HOH HOH . I 5 HOH B 80 456 253 HOH HOH . I 5 HOH B 81 457 255 HOH HOH . I 5 HOH B 82 458 256 HOH HOH . I 5 HOH B 83 459 257 HOH HOH . I 5 HOH B 84 460 259 HOH HOH . I 5 HOH B 85 461 260 HOH HOH . I 5 HOH B 86 462 262 HOH HOH . I 5 HOH B 87 463 264 HOH HOH . I 5 HOH B 88 464 265 HOH HOH . I 5 HOH B 89 465 266 HOH HOH . I 5 HOH B 90 466 268 HOH HOH . I 5 HOH B 91 467 277 HOH HOH . I 5 HOH B 92 468 287 HOH HOH . I 5 HOH B 93 469 288 HOH HOH . I 5 HOH B 94 470 290 HOH HOH . I 5 HOH B 95 471 293 HOH HOH . I 5 HOH B 96 472 302 HOH HOH . I 5 HOH B 97 473 303 HOH HOH . I 5 HOH B 98 474 304 HOH HOH . I 5 HOH B 99 475 305 HOH HOH . I 5 HOH B 100 476 307 HOH HOH . I 5 HOH B 101 477 308 HOH HOH . I 5 HOH B 102 478 314 HOH HOH . I 5 HOH B 103 479 315 HOH HOH . I 5 HOH B 104 480 316 HOH HOH . I 5 HOH B 105 481 317 HOH HOH . I 5 HOH B 106 482 318 HOH HOH . I 5 HOH B 107 483 319 HOH HOH . I 5 HOH B 108 484 320 HOH HOH . I 5 HOH B 109 485 321 HOH HOH . I 5 HOH B 110 486 322 HOH HOH . I 5 HOH B 111 487 323 HOH HOH . I 5 HOH B 112 488 324 HOH HOH . I 5 HOH B 113 489 325 HOH HOH . I 5 HOH B 114 490 326 HOH HOH . I 5 HOH B 115 491 327 HOH HOH . I 5 HOH B 116 492 328 HOH HOH . I 5 HOH B 117 493 329 HOH HOH . I 5 HOH B 118 494 331 HOH HOH . I 5 HOH B 119 495 332 HOH HOH . I 5 HOH B 120 496 333 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -39 _atom_site.Cartn_y -32.029 _atom_site.Cartn_z 30.436 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 374 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #