data_3SK6 # _model_server_result.job_id 76OI2Kv5nlgfLD2VRb-lQw _model_server_result.datetime_utc '2024-10-11 10:18:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3sk6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":151}' # _entry.id 3SK6 # _exptl.entry_id 3SK6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4R)-2-METHYLPENTANE-2,4-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3SK6 _cell.length_a 31.012 _cell.length_b 60.472 _cell.length_c 79.157 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SK6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id MRD _chem_comp.mon_nstd_flag . _chem_comp.name (4R)-2-METHYLPENTANE-2,4-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MRD sing 224 n n C1 H1C1 MRD sing 225 n n C1 H1C2 MRD sing 226 n n C1 H1C3 MRD sing 227 n n C2 O2 MRD sing 228 n n C2 CM MRD sing 229 n n C2 C3 MRD sing 230 n n O2 H2 MRD sing 231 n n CM HMC1 MRD sing 232 n n CM HMC2 MRD sing 233 n n CM HMC3 MRD sing 234 n n C3 C4 MRD sing 235 n n C3 H3C1 MRD sing 236 n n C3 H3C2 MRD sing 237 n n C4 O4 MRD sing 238 n n C4 C5 MRD sing 239 n n C4 H4 MRD sing 240 n n O4 HA MRD sing 241 n n C5 H5C1 MRD sing 242 n n C5 H5C2 MRD sing 243 n n C5 H5C3 MRD sing 244 n n # _atom_sites.entry_id 3SK6 _atom_sites.fract_transf_matrix[1][1] 0.032246 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016537 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012633 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 THP A 1 150 150 THP THP . C 3 MRD A 1 151 151 MRD MRD . D 4 HOH A 1 152 152 HOH HOH . D 4 HOH A 2 153 153 HOH HOH . D 4 HOH A 3 154 154 HOH HOH . D 4 HOH A 4 155 155 HOH HOH . D 4 HOH A 5 156 156 HOH HOH . D 4 HOH A 6 157 157 HOH HOH . D 4 HOH A 7 158 158 HOH HOH . D 4 HOH A 8 159 159 HOH HOH . D 4 HOH A 9 160 160 HOH HOH . D 4 HOH A 10 161 161 HOH HOH . D 4 HOH A 11 162 162 HOH HOH . D 4 HOH A 12 163 163 HOH HOH . D 4 HOH A 13 164 164 HOH HOH . D 4 HOH A 14 165 165 HOH HOH . D 4 HOH A 15 166 166 HOH HOH . D 4 HOH A 16 167 167 HOH HOH . D 4 HOH A 17 168 168 HOH HOH . D 4 HOH A 18 169 169 HOH HOH . D 4 HOH A 19 170 170 HOH HOH . D 4 HOH A 20 171 171 HOH HOH . D 4 HOH A 21 172 172 HOH HOH . D 4 HOH A 22 173 173 HOH HOH . D 4 HOH A 23 174 174 HOH HOH . D 4 HOH A 24 175 175 HOH HOH . D 4 HOH A 25 176 176 HOH HOH . D 4 HOH A 26 177 177 HOH HOH . D 4 HOH A 27 178 178 HOH HOH . D 4 HOH A 28 179 179 HOH HOH . D 4 HOH A 29 180 180 HOH HOH . D 4 HOH A 30 181 181 HOH HOH . D 4 HOH A 31 182 182 HOH HOH . D 4 HOH A 32 183 183 HOH HOH . D 4 HOH A 33 184 184 HOH HOH . D 4 HOH A 34 185 185 HOH HOH . D 4 HOH A 35 186 186 HOH HOH . D 4 HOH A 36 187 187 HOH HOH . D 4 HOH A 37 188 188 HOH HOH . D 4 HOH A 38 189 189 HOH HOH . D 4 HOH A 39 190 190 HOH HOH . D 4 HOH A 40 191 191 HOH HOH . D 4 HOH A 41 192 192 HOH HOH . D 4 HOH A 42 193 193 HOH HOH . D 4 HOH A 43 194 194 HOH HOH . D 4 HOH A 44 195 195 HOH HOH . D 4 HOH A 45 196 196 HOH HOH . D 4 HOH A 46 197 197 HOH HOH . D 4 HOH A 47 198 198 HOH HOH . D 4 HOH A 48 199 199 HOH HOH . D 4 HOH A 49 200 200 HOH HOH . D 4 HOH A 50 201 201 HOH HOH . D 4 HOH A 51 202 202 HOH HOH . D 4 HOH A 52 203 203 HOH HOH . D 4 HOH A 53 204 204 HOH HOH . D 4 HOH A 54 205 205 HOH HOH . D 4 HOH A 55 206 206 HOH HOH . D 4 HOH A 56 207 207 HOH HOH . D 4 HOH A 57 208 208 HOH HOH . D 4 HOH A 58 209 209 HOH HOH . D 4 HOH A 59 210 210 HOH HOH . D 4 HOH A 60 211 211 HOH HOH . D 4 HOH A 61 212 212 HOH HOH . D 4 HOH A 62 213 213 HOH HOH . D 4 HOH A 63 214 214 HOH HOH . D 4 HOH A 64 215 215 HOH HOH . D 4 HOH A 65 216 216 HOH HOH . D 4 HOH A 66 217 217 HOH HOH . D 4 HOH A 67 218 218 HOH HOH . D 4 HOH A 68 219 219 HOH HOH . D 4 HOH A 69 220 220 HOH HOH . D 4 HOH A 70 221 221 HOH HOH . D 4 HOH A 71 222 222 HOH HOH . D 4 HOH A 72 223 223 HOH HOH . D 4 HOH A 73 224 224 HOH HOH . D 4 HOH A 74 225 225 HOH HOH . D 4 HOH A 75 226 226 HOH HOH . D 4 HOH A 76 227 227 HOH HOH . D 4 HOH A 77 228 228 HOH HOH . D 4 HOH A 78 229 229 HOH HOH . D 4 HOH A 79 230 230 HOH HOH . D 4 HOH A 80 231 231 HOH HOH . D 4 HOH A 81 232 232 HOH HOH . D 4 HOH A 82 233 233 HOH HOH . D 4 HOH A 83 234 234 HOH HOH . D 4 HOH A 84 235 235 HOH HOH . D 4 HOH A 85 236 236 HOH HOH . D 4 HOH A 86 237 237 HOH HOH . D 4 HOH A 87 238 238 HOH HOH . D 4 HOH A 88 239 239 HOH HOH . D 4 HOH A 89 240 240 HOH HOH . D 4 HOH A 90 241 241 HOH HOH . D 4 HOH A 91 242 242 HOH HOH . D 4 HOH A 92 243 243 HOH HOH . D 4 HOH A 93 244 244 HOH HOH . D 4 HOH A 94 245 245 HOH HOH . D 4 HOH A 95 246 246 HOH HOH . D 4 HOH A 96 247 247 HOH HOH . D 4 HOH A 97 248 248 HOH HOH . D 4 HOH A 98 249 249 HOH HOH . D 4 HOH A 99 250 250 HOH HOH . D 4 HOH A 100 251 251 HOH HOH . D 4 HOH A 101 252 252 HOH HOH . D 4 HOH A 102 253 253 HOH HOH . D 4 HOH A 103 254 254 HOH HOH . D 4 HOH A 104 255 255 HOH HOH . D 4 HOH A 105 256 256 HOH HOH . D 4 HOH A 106 257 257 HOH HOH . D 4 HOH A 107 258 258 HOH HOH . D 4 HOH A 108 259 259 HOH HOH . D 4 HOH A 109 260 260 HOH HOH . D 4 HOH A 110 261 261 HOH HOH . D 4 HOH A 111 262 262 HOH HOH . D 4 HOH A 112 263 263 HOH HOH . D 4 HOH A 113 264 264 HOH HOH . D 4 HOH A 114 265 265 HOH HOH . D 4 HOH A 115 266 266 HOH HOH . D 4 HOH A 116 267 267 HOH HOH . D 4 HOH A 117 268 268 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MRD . . . C 3 -8.542 5.918 -9.133 1 26.58 ? C1 MRD 151 A 1 HETATM 2 C C2 MRD . . . C 3 -7.038 5.987 -9.363 1 23.14 ? C2 MRD 151 A 1 HETATM 3 O O2 MRD . . . C 3 -6.578 4.658 -9.029 1 26.46 ? O2 MRD 151 A 1 HETATM 4 C CM MRD . . . C 3 -6.737 6.264 -10.809 1 22.32 ? CM MRD 151 A 1 HETATM 5 C C3 MRD . . . C 3 -6.333 7.025 -8.502 1 23.25 ? C3 MRD 151 A 1 HETATM 6 C C4 MRD . . . C 3 -5.671 6.454 -7.261 1 25.53 ? C4 MRD 151 A 1 HETATM 7 O O4 MRD . . . C 3 -4.659 5.587 -7.74 1 24.49 ? O4 MRD 151 A 1 HETATM 8 C C5 MRD . . . C 3 -6.708 5.664 -6.477 1 23.15 ? C5 MRD 151 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #