data_3SL1 # _model_server_result.job_id QH6CJBtUV5OMIQGhxNIvRg _model_server_result.datetime_utc '2024-10-16 23:21:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3sl1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":412}' # _entry.id 3SL1 # _exptl.entry_id 3SL1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3SL1 _cell.length_a 113.181 _cell.length_b 113.181 _cell.length_c 229.616 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SL1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA hexameric 6 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1,2,3 A,B,C,D,E 2 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 56.5905 -98.017621 0 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 113.181 0 0 4 'crystal symmetry operation' 10_545 y+2/3,x-2/3,-z+1/3 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 113.181 -65.345081 76.538667 5 'crystal symmetry operation' 11_445 x-y-1/3,-y-2/3,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 -65.345081 76.538667 6 'crystal symmetry operation' 12_555 -x+2/3,-x+y+1/3,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 56.5905 32.67254 76.538667 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 195 A HIS 193 1_555 C MN MN . A MN 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc2 A OD2 ASP 218 A ASP 216 1_555 B MN MN . A MN 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc3 A OD1 ASP 218 A ASP 216 1_555 C MN MN . A MN 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc4 A ND1 HIS 220 A HIS 218 1_555 B MN MN . A MN 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc5 A OD2 ASP 222 A ASP 220 1_555 C MN MN . A MN 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc6 A OD2 ASP 325 A ASP 323 1_555 B MN MN . A MN 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc7 A OD2 ASP 325 A ASP 323 1_555 C MN MN . A MN 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc8 A OD2 ASP 327 A ASP 325 1_555 B MN MN . A MN 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc9 A OD1 ASP 327 A ASP 325 1_555 B MN MN . A MN 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc10 B MN MN . A MN 412 1_555 D O3 FB6 . A FB6 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc11 B MN MN . A MN 412 1_555 D O2 FB6 . A FB6 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? metalc ? metalc12 C MN MN . A MN 413 1_555 D O3 FB6 . A FB6 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc13 C MN MN . A MN 413 1_555 E O HOH . A HOH 593 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3SL1 _atom_sites.fract_transf_matrix[1][1] 0.008835 _atom_sites.fract_transf_matrix[1][2] 0.005101 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010202 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004355 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 412 412 MN MN . C 2 MN A 1 413 413 MN MN . D 3 FB6 A 1 414 414 FB6 FB6 . E 4 HOH A 1 415 415 HOH HOH . E 4 HOH A 2 416 416 HOH HOH . E 4 HOH A 3 417 417 HOH HOH . E 4 HOH A 4 418 418 HOH HOH . E 4 HOH A 5 419 419 HOH HOH . E 4 HOH A 6 420 420 HOH HOH . E 4 HOH A 7 421 421 HOH HOH . E 4 HOH A 8 422 422 HOH HOH . E 4 HOH A 9 423 423 HOH HOH . E 4 HOH A 10 424 424 HOH HOH . E 4 HOH A 11 425 425 HOH HOH . E 4 HOH A 12 426 426 HOH HOH . E 4 HOH A 13 427 427 HOH HOH . E 4 HOH A 14 428 428 HOH HOH . E 4 HOH A 15 429 429 HOH HOH . E 4 HOH A 16 430 430 HOH HOH . E 4 HOH A 17 431 431 HOH HOH . E 4 HOH A 18 432 432 HOH HOH . E 4 HOH A 19 433 433 HOH HOH . E 4 HOH A 20 434 434 HOH HOH . E 4 HOH A 21 435 435 HOH HOH . E 4 HOH A 22 436 436 HOH HOH . E 4 HOH A 23 437 437 HOH HOH . E 4 HOH A 24 438 438 HOH HOH . E 4 HOH A 25 439 439 HOH HOH . E 4 HOH A 26 440 440 HOH HOH . E 4 HOH A 27 441 441 HOH HOH . E 4 HOH A 28 442 442 HOH HOH . E 4 HOH A 29 443 443 HOH HOH . E 4 HOH A 30 444 444 HOH HOH . E 4 HOH A 31 445 445 HOH HOH . E 4 HOH A 32 446 446 HOH HOH . E 4 HOH A 33 447 447 HOH HOH . E 4 HOH A 34 448 448 HOH HOH . E 4 HOH A 35 449 449 HOH HOH . E 4 HOH A 36 450 450 HOH HOH . E 4 HOH A 37 451 451 HOH HOH . E 4 HOH A 38 452 452 HOH HOH . E 4 HOH A 39 453 453 HOH HOH . E 4 HOH A 40 454 454 HOH HOH . E 4 HOH A 41 455 455 HOH HOH . E 4 HOH A 42 456 456 HOH HOH . E 4 HOH A 43 457 457 HOH HOH . E 4 HOH A 44 458 458 HOH HOH . E 4 HOH A 45 459 459 HOH HOH . E 4 HOH A 46 460 460 HOH HOH . E 4 HOH A 47 461 461 HOH HOH . E 4 HOH A 48 462 462 HOH HOH . E 4 HOH A 49 463 463 HOH HOH . E 4 HOH A 50 464 464 HOH HOH . E 4 HOH A 51 465 465 HOH HOH . E 4 HOH A 52 466 466 HOH HOH . E 4 HOH A 53 467 467 HOH HOH . E 4 HOH A 54 468 468 HOH HOH . E 4 HOH A 55 469 469 HOH HOH . E 4 HOH A 56 470 470 HOH HOH . E 4 HOH A 57 471 471 HOH HOH . E 4 HOH A 58 472 472 HOH HOH . E 4 HOH A 59 473 473 HOH HOH . E 4 HOH A 60 474 474 HOH HOH . E 4 HOH A 61 475 475 HOH HOH . E 4 HOH A 62 476 476 HOH HOH . E 4 HOH A 63 477 477 HOH HOH . E 4 HOH A 64 478 478 HOH HOH . E 4 HOH A 65 479 479 HOH HOH . E 4 HOH A 66 480 480 HOH HOH . E 4 HOH A 67 481 481 HOH HOH . E 4 HOH A 68 482 482 HOH HOH . E 4 HOH A 69 483 483 HOH HOH . E 4 HOH A 70 484 484 HOH HOH . E 4 HOH A 71 485 485 HOH HOH . E 4 HOH A 72 486 486 HOH HOH . E 4 HOH A 73 487 487 HOH HOH . E 4 HOH A 74 488 488 HOH HOH . E 4 HOH A 75 489 489 HOH HOH . E 4 HOH A 76 490 490 HOH HOH . E 4 HOH A 77 491 491 HOH HOH . E 4 HOH A 78 492 492 HOH HOH . E 4 HOH A 79 493 493 HOH HOH . E 4 HOH A 80 494 494 HOH HOH . E 4 HOH A 81 495 495 HOH HOH . E 4 HOH A 82 496 496 HOH HOH . E 4 HOH A 83 497 497 HOH HOH . E 4 HOH A 84 498 498 HOH HOH . E 4 HOH A 85 499 499 HOH HOH . E 4 HOH A 86 500 500 HOH HOH . E 4 HOH A 87 501 501 HOH HOH . E 4 HOH A 88 502 502 HOH HOH . E 4 HOH A 89 503 503 HOH HOH . E 4 HOH A 90 504 504 HOH HOH . E 4 HOH A 91 505 505 HOH HOH . E 4 HOH A 92 506 506 HOH HOH . E 4 HOH A 93 507 507 HOH HOH . E 4 HOH A 94 508 508 HOH HOH . E 4 HOH A 95 509 509 HOH HOH . E 4 HOH A 96 510 510 HOH HOH . E 4 HOH A 97 511 511 HOH HOH . E 4 HOH A 98 512 512 HOH HOH . E 4 HOH A 99 513 513 HOH HOH . E 4 HOH A 100 514 514 HOH HOH . E 4 HOH A 101 515 515 HOH HOH . E 4 HOH A 102 516 516 HOH HOH . E 4 HOH A 103 517 517 HOH HOH . E 4 HOH A 104 518 518 HOH HOH . E 4 HOH A 105 519 519 HOH HOH . E 4 HOH A 106 520 520 HOH HOH . E 4 HOH A 107 521 521 HOH HOH . E 4 HOH A 108 522 522 HOH HOH . E 4 HOH A 109 523 523 HOH HOH . E 4 HOH A 110 524 524 HOH HOH . E 4 HOH A 111 525 525 HOH HOH . E 4 HOH A 112 526 526 HOH HOH . E 4 HOH A 113 527 527 HOH HOH . E 4 HOH A 114 528 528 HOH HOH . E 4 HOH A 115 529 529 HOH HOH . E 4 HOH A 116 530 530 HOH HOH . E 4 HOH A 117 531 531 HOH HOH . E 4 HOH A 118 532 532 HOH HOH . E 4 HOH A 119 533 533 HOH HOH . E 4 HOH A 120 534 534 HOH HOH . E 4 HOH A 121 535 535 HOH HOH . E 4 HOH A 122 536 536 HOH HOH . E 4 HOH A 123 537 537 HOH HOH . E 4 HOH A 124 538 538 HOH HOH . E 4 HOH A 125 539 539 HOH HOH . E 4 HOH A 126 540 540 HOH HOH . E 4 HOH A 127 541 541 HOH HOH . E 4 HOH A 128 542 542 HOH HOH . E 4 HOH A 129 543 543 HOH HOH . E 4 HOH A 130 544 544 HOH HOH . E 4 HOH A 131 545 545 HOH HOH . E 4 HOH A 132 546 546 HOH HOH . E 4 HOH A 133 547 547 HOH HOH . E 4 HOH A 134 548 548 HOH HOH . E 4 HOH A 135 549 549 HOH HOH . E 4 HOH A 136 550 550 HOH HOH . E 4 HOH A 137 551 551 HOH HOH . E 4 HOH A 138 552 552 HOH HOH . E 4 HOH A 139 553 553 HOH HOH . E 4 HOH A 140 554 554 HOH HOH . E 4 HOH A 141 555 555 HOH HOH . E 4 HOH A 142 556 556 HOH HOH . E 4 HOH A 143 557 557 HOH HOH . E 4 HOH A 144 558 558 HOH HOH . E 4 HOH A 145 559 559 HOH HOH . E 4 HOH A 146 560 560 HOH HOH . E 4 HOH A 147 561 561 HOH HOH . E 4 HOH A 148 562 562 HOH HOH . E 4 HOH A 149 563 563 HOH HOH . E 4 HOH A 150 564 564 HOH HOH . E 4 HOH A 151 565 565 HOH HOH . E 4 HOH A 152 566 566 HOH HOH . E 4 HOH A 153 567 567 HOH HOH . E 4 HOH A 154 568 568 HOH HOH . E 4 HOH A 155 569 569 HOH HOH . E 4 HOH A 156 570 570 HOH HOH . E 4 HOH A 157 571 571 HOH HOH . E 4 HOH A 158 572 572 HOH HOH . E 4 HOH A 159 573 573 HOH HOH . E 4 HOH A 160 574 574 HOH HOH . E 4 HOH A 161 575 575 HOH HOH . E 4 HOH A 162 576 576 HOH HOH . E 4 HOH A 163 577 577 HOH HOH . E 4 HOH A 164 578 578 HOH HOH . E 4 HOH A 165 579 579 HOH HOH . E 4 HOH A 166 580 580 HOH HOH . E 4 HOH A 167 581 581 HOH HOH . E 4 HOH A 168 582 582 HOH HOH . E 4 HOH A 169 583 583 HOH HOH . E 4 HOH A 170 584 584 HOH HOH . E 4 HOH A 171 585 585 HOH HOH . E 4 HOH A 172 586 586 HOH HOH . E 4 HOH A 173 587 587 HOH HOH . E 4 HOH A 174 588 588 HOH HOH . E 4 HOH A 175 589 589 HOH HOH . E 4 HOH A 176 590 590 HOH HOH . E 4 HOH A 177 591 591 HOH HOH . E 4 HOH A 178 592 592 HOH HOH . E 4 HOH A 179 593 593 HOH HOH . E 4 HOH A 180 594 594 HOH HOH . E 4 HOH A 181 595 595 HOH HOH . E 4 HOH A 182 596 596 HOH HOH . E 4 HOH A 183 597 597 HOH HOH . E 4 HOH A 184 598 598 HOH HOH . E 4 HOH A 185 599 599 HOH HOH . E 4 HOH A 186 600 600 HOH HOH . E 4 HOH A 187 601 601 HOH HOH . E 4 HOH A 188 602 602 HOH HOH . E 4 HOH A 189 603 603 HOH HOH . E 4 HOH A 190 604 604 HOH HOH . E 4 HOH A 191 605 605 HOH HOH . E 4 HOH A 192 606 606 HOH HOH . E 4 HOH A 193 607 607 HOH HOH . E 4 HOH A 194 608 608 HOH HOH . E 4 HOH A 195 609 609 HOH HOH . E 4 HOH A 196 610 610 HOH HOH . E 4 HOH A 197 611 611 HOH HOH . E 4 HOH A 198 612 612 HOH HOH . E 4 HOH A 199 613 613 HOH HOH . E 4 HOH A 200 614 614 HOH HOH . E 4 HOH A 201 615 615 HOH HOH . E 4 HOH A 202 616 616 HOH HOH . E 4 HOH A 203 617 617 HOH HOH . E 4 HOH A 204 618 618 HOH HOH . E 4 HOH A 205 619 619 HOH HOH . E 4 HOH A 206 620 620 HOH HOH . E 4 HOH A 207 621 621 HOH HOH . E 4 HOH A 208 622 622 HOH HOH . E 4 HOH A 209 623 623 HOH HOH . E 4 HOH A 210 624 624 HOH HOH . E 4 HOH A 211 625 625 HOH HOH . E 4 HOH A 212 626 626 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 43.889 _atom_site.Cartn_y -16.787 _atom_site.Cartn_z 22.581 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 18.5 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 412 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #