data_3SL9
#
_model_server_result.job_id            i2vAgpYzQI5ts9o4cqmjNw 
_model_server_result.datetime_utc      '2025-04-03 21:14:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3sl9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"HA","auth_seq_id":5}' 
#
_entry.id    3SL9 
#
_exptl.entry_id    3SL9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              69.085 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            IMIDAZOLE 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102 
_cell.angle_gamma         90 
_cell.entry_id            3SL9 
_cell.length_a            160.89 
_cell.length_b            80.7 
_cell.length_c            87.94 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3SL9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
? dimeric 2 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I,J,K,L,M,N,O,P,KA,LA 1 1 
C,D,Q,R,S,T,U,V,W,X,MA 2 1 
E,F,Y,Z,AA,BA,CA,DA,EA,FA,NA,OA 3 1 
G,H,GA,HA,IA,JA,PA,QA 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 L N N 
? 5 M N N 
? 5 X N N 
? 5 EA N N 
? 5 HA N N 
? 5 IA N N 
? 5 JA N N 
#
_chem_comp.formula           'C3 H5 N2 1' 
_chem_comp.formula_weight    69.085 
_chem_comp.id                IMD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              IMIDAZOLE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 IMD sing 195 n y 
N1 C5 IMD sing 196 n y 
N1 HN1 IMD sing 197 n n 
C2 N3 IMD doub 198 n y 
C2 H2 IMD sing 199 n n 
N3 C4 IMD sing 200 n y 
N3 HN3 IMD sing 201 n n 
C4 C5 IMD doub 202 n y 
C4 H4 IMD sing 203 n n 
C5 H5 IMD sing 204 n n 
#
_atom_sites.entry_id                     3SL9 
_atom_sites.fract_transf_matrix[1][1]    0.006215 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001321 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012392 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011625 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 EDO A 1 1 1 EDO EDO . 
J 3 EDO A 1 2 2 EDO EDO . 
K 4 PEG A 1 306 306 PEG PEG . 
L 5 IMD A 1 307 307 IMD IMD . 
M 5 IMD A 1 308 308 IMD IMD . 
N 3 EDO A 1 5 5 EDO EDO . 
O 3 EDO C 1 3 3 EDO EDO . 
P 4 PEG C 1 2 2 PEG PEG . 
Q 6 GOL B 1 308 308 GOL GOL . 
R 6 GOL B 1 309 309 GOL GOL . 
S 3 EDO B 1 4 4 EDO EDO . 
T 3 EDO B 1 7 7 EDO EDO . 
U 3 EDO B 1 6 6 EDO EDO . 
V 4 PEG B 1 3 3 PEG PEG . 
W 4 PEG B 1 306 306 PEG PEG . 
X 5 IMD B 1 307 307 IMD IMD . 
Y 3 EDO E 1 8 8 EDO EDO . 
Z 6 GOL E 1 2 2 GOL GOL . 
AA 3 EDO E 1 9 9 EDO EDO . 
BA 3 EDO E 1 10 10 EDO EDO . 
CA 3 EDO E 1 11 11 EDO EDO . 
DA 4 PEG E 1 5 5 PEG PEG . 
EA 5 IMD E 1 4 4 IMD IMD . 
FA 6 GOL F 1 4 4 GOL GOL . 
GA 6 GOL G 1 1 1 GOL GOL . 
HA 5 IMD G 1 5 5 IMD IMD . 
IA 5 IMD G 1 7 7 IMD IMD . 
JA 5 IMD G 1 6 6 IMD IMD . 
KA 7 HOH A 1 3 3 HOH HOH . 
KA 7 HOH A 2 4 4 HOH HOH . 
KA 7 HOH A 3 6 6 HOH HOH . 
KA 7 HOH A 4 7 7 HOH HOH . 
KA 7 HOH A 5 8 8 HOH HOH . 
KA 7 HOH A 6 9 9 HOH HOH . 
KA 7 HOH A 7 10 10 HOH HOH . 
KA 7 HOH A 8 11 11 HOH HOH . 
KA 7 HOH A 9 12 12 HOH HOH . 
KA 7 HOH A 10 13 13 HOH HOH . 
KA 7 HOH A 11 14 14 HOH HOH . 
KA 7 HOH A 12 15 15 HOH HOH . 
KA 7 HOH A 13 16 16 HOH HOH . 
KA 7 HOH A 14 17 17 HOH HOH . 
KA 7 HOH A 15 18 18 HOH HOH . 
KA 7 HOH A 16 19 19 HOH HOH . 
KA 7 HOH A 17 20 20 HOH HOH . 
KA 7 HOH A 18 21 21 HOH HOH . 
KA 7 HOH A 19 22 22 HOH HOH . 
KA 7 HOH A 20 23 23 HOH HOH . 
KA 7 HOH A 21 24 24 HOH HOH . 
KA 7 HOH A 22 25 25 HOH HOH . 
KA 7 HOH A 23 26 26 HOH HOH . 
KA 7 HOH A 24 27 27 HOH HOH . 
KA 7 HOH A 25 28 28 HOH HOH . 
KA 7 HOH A 26 29 29 HOH HOH . 
KA 7 HOH A 27 30 30 HOH HOH . 
KA 7 HOH A 28 31 31 HOH HOH . 
KA 7 HOH A 29 32 32 HOH HOH . 
KA 7 HOH A 30 33 33 HOH HOH . 
KA 7 HOH A 31 34 34 HOH HOH . 
KA 7 HOH A 32 35 35 HOH HOH . 
KA 7 HOH A 33 36 36 HOH HOH . 
KA 7 HOH A 34 37 37 HOH HOH . 
KA 7 HOH A 35 38 38 HOH HOH . 
KA 7 HOH A 36 39 39 HOH HOH . 
KA 7 HOH A 37 40 40 HOH HOH . 
KA 7 HOH A 38 41 41 HOH HOH . 
KA 7 HOH A 39 42 42 HOH HOH . 
KA 7 HOH A 40 43 43 HOH HOH . 
KA 7 HOH A 41 44 44 HOH HOH . 
KA 7 HOH A 42 87 87 HOH HOH . 
KA 7 HOH A 43 309 309 HOH HOH . 
KA 7 HOH A 44 310 310 HOH HOH . 
KA 7 HOH A 45 311 5 HOH HOH . 
LA 7 HOH C 1 45 45 HOH HOH . 
LA 7 HOH C 2 46 46 HOH HOH . 
LA 7 HOH C 3 47 47 HOH HOH . 
LA 7 HOH C 4 48 48 HOH HOH . 
LA 7 HOH C 5 49 49 HOH HOH . 
LA 7 HOH C 6 50 50 HOH HOH . 
LA 7 HOH C 7 51 51 HOH HOH . 
MA 7 HOH B 1 52 52 HOH HOH . 
MA 7 HOH B 2 53 53 HOH HOH . 
MA 7 HOH B 3 54 54 HOH HOH . 
MA 7 HOH B 4 55 55 HOH HOH . 
MA 7 HOH B 5 56 56 HOH HOH . 
MA 7 HOH B 6 57 57 HOH HOH . 
MA 7 HOH B 7 58 58 HOH HOH . 
MA 7 HOH B 8 59 59 HOH HOH . 
MA 7 HOH B 9 60 60 HOH HOH . 
MA 7 HOH B 10 61 61 HOH HOH . 
MA 7 HOH B 11 62 62 HOH HOH . 
MA 7 HOH B 12 63 63 HOH HOH . 
MA 7 HOH B 13 64 64 HOH HOH . 
MA 7 HOH B 14 65 65 HOH HOH . 
MA 7 HOH B 15 66 66 HOH HOH . 
MA 7 HOH B 16 67 67 HOH HOH . 
MA 7 HOH B 17 68 68 HOH HOH . 
MA 7 HOH B 18 69 69 HOH HOH . 
MA 7 HOH B 19 70 70 HOH HOH . 
MA 7 HOH B 20 71 71 HOH HOH . 
MA 7 HOH B 21 72 72 HOH HOH . 
MA 7 HOH B 22 73 73 HOH HOH . 
MA 7 HOH B 23 74 74 HOH HOH . 
MA 7 HOH B 24 75 75 HOH HOH . 
MA 7 HOH B 25 76 76 HOH HOH . 
MA 7 HOH B 26 77 77 HOH HOH . 
MA 7 HOH B 27 78 78 HOH HOH . 
MA 7 HOH B 28 79 79 HOH HOH . 
MA 7 HOH B 29 80 80 HOH HOH . 
MA 7 HOH B 30 81 81 HOH HOH . 
MA 7 HOH B 31 82 82 HOH HOH . 
MA 7 HOH B 32 83 83 HOH HOH . 
MA 7 HOH B 33 84 84 HOH HOH . 
MA 7 HOH B 34 85 85 HOH HOH . 
MA 7 HOH B 35 86 86 HOH HOH . 
MA 7 HOH B 36 88 88 HOH HOH . 
MA 7 HOH B 37 89 89 HOH HOH . 
NA 7 HOH E 1 90 90 HOH HOH . 
NA 7 HOH E 2 91 91 HOH HOH . 
NA 7 HOH E 3 92 92 HOH HOH . 
NA 7 HOH E 4 93 93 HOH HOH . 
NA 7 HOH E 5 94 94 HOH HOH . 
NA 7 HOH E 6 95 95 HOH HOH . 
NA 7 HOH E 7 96 96 HOH HOH . 
NA 7 HOH E 8 97 97 HOH HOH . 
NA 7 HOH E 9 98 98 HOH HOH . 
NA 7 HOH E 10 99 99 HOH HOH . 
NA 7 HOH E 11 100 100 HOH HOH . 
NA 7 HOH E 12 101 101 HOH HOH . 
NA 7 HOH E 13 102 102 HOH HOH . 
NA 7 HOH E 14 103 103 HOH HOH . 
NA 7 HOH E 15 104 104 HOH HOH . 
NA 7 HOH E 16 105 105 HOH HOH . 
NA 7 HOH E 17 106 106 HOH HOH . 
NA 7 HOH E 18 107 107 HOH HOH . 
NA 7 HOH E 19 108 108 HOH HOH . 
NA 7 HOH E 20 109 109 HOH HOH . 
NA 7 HOH E 21 110 110 HOH HOH . 
NA 7 HOH E 22 111 111 HOH HOH . 
NA 7 HOH E 23 112 112 HOH HOH . 
NA 7 HOH E 24 113 113 HOH HOH . 
NA 7 HOH E 25 114 114 HOH HOH . 
NA 7 HOH E 26 115 115 HOH HOH . 
NA 7 HOH E 27 116 116 HOH HOH . 
NA 7 HOH E 28 117 117 HOH HOH . 
NA 7 HOH E 29 118 118 HOH HOH . 
NA 7 HOH E 30 119 119 HOH HOH . 
NA 7 HOH E 31 120 120 HOH HOH . 
NA 7 HOH E 32 121 121 HOH HOH . 
NA 7 HOH E 33 122 122 HOH HOH . 
NA 7 HOH E 34 123 123 HOH HOH . 
NA 7 HOH E 35 124 124 HOH HOH . 
NA 7 HOH E 36 125 125 HOH HOH . 
NA 7 HOH E 37 126 126 HOH HOH . 
NA 7 HOH E 38 127 127 HOH HOH . 
OA 7 HOH F 1 128 128 HOH HOH . 
PA 7 HOH G 1 129 129 HOH HOH . 
PA 7 HOH G 2 130 130 HOH HOH . 
PA 7 HOH G 3 131 131 HOH HOH . 
PA 7 HOH G 4 132 132 HOH HOH . 
PA 7 HOH G 5 133 133 HOH HOH . 
PA 7 HOH G 6 134 134 HOH HOH . 
PA 7 HOH G 7 135 135 HOH HOH . 
PA 7 HOH G 8 136 136 HOH HOH . 
PA 7 HOH G 9 137 137 HOH HOH . 
PA 7 HOH G 10 138 138 HOH HOH . 
PA 7 HOH G 11 306 306 HOH HOH . 
PA 7 HOH G 12 307 307 HOH HOH . 
PA 7 HOH G 13 308 308 HOH HOH . 
PA 7 HOH G 14 309 309 HOH HOH . 
PA 7 HOH G 15 310 310 HOH HOH . 
PA 7 HOH G 16 311 311 HOH HOH . 
PA 7 HOH G 17 312 312 HOH HOH . 
PA 7 HOH G 18 313 313 HOH HOH . 
PA 7 HOH G 19 314 314 HOH HOH . 
PA 7 HOH G 20 315 315 HOH HOH . 
PA 7 HOH G 21 316 316 HOH HOH . 
PA 7 HOH G 22 317 317 HOH HOH . 
QA 7 HOH H 1 151 151 HOH HOH . 
QA 7 HOH H 2 152 152 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 IMD . . . HA 5 62.82 60.363 19.672 1 71 ? N1 IMD 5 G 1 
HETATM 2 C C2 IMD . . . HA 5 63.346 59.118 19.63 1 77.58 ? C2 IMD 5 G 1 
HETATM 3 N N3 IMD . . . HA 5 64.016 58.861 20.785 1 77.76 ? N3 IMD 5 G 1 
HETATM 4 C C4 IMD . . . HA 5 63.917 59.962 21.57 1 76.18 ? C4 IMD 5 G 1 
HETATM 5 C C5 IMD . . . HA 5 63.172 60.904 20.865 1 72.58 ? C5 IMD 5 G 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#