data_3SLC # _model_server_result.job_id C3cXBXBIKUdm_A922yLLMw _model_server_result.datetime_utc '2024-11-17 12:50:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3slc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":503}' # _entry.id 3SLC # _exptl.entry_id 3SLC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.57 _cell.angle_gamma 90 _cell.entry_id 3SLC _cell.length_a 283.159 _cell.length_b 62.168 _cell.length_c 91.695 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SLC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,I,J 1 1 C,D,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3SLC _atom_sites.fract_transf_matrix[1][1] 0.003532 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000221 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016085 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010927 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 EDO A 1 504 504 EDO EDO . F 2 EDO B 1 501 501 EDO EDO . G 2 EDO B 1 502 502 EDO EDO . H 2 EDO D 1 503 503 EDO EDO . I 3 HOH A 1 401 1 HOH HOH . I 3 HOH A 2 402 2 HOH HOH . I 3 HOH A 3 403 3 HOH HOH . I 3 HOH A 4 404 6 HOH HOH . I 3 HOH A 5 405 13 HOH HOH . I 3 HOH A 6 406 15 HOH HOH . I 3 HOH A 7 407 22 HOH HOH . I 3 HOH A 8 408 31 HOH HOH . I 3 HOH A 9 409 33 HOH HOH . I 3 HOH A 10 410 35 HOH HOH . I 3 HOH A 11 411 37 HOH HOH . I 3 HOH A 12 412 38 HOH HOH . I 3 HOH A 13 413 40 HOH HOH . I 3 HOH A 14 414 41 HOH HOH . I 3 HOH A 15 415 42 HOH HOH . I 3 HOH A 16 416 43 HOH HOH . I 3 HOH A 17 417 44 HOH HOH . I 3 HOH A 18 418 48 HOH HOH . I 3 HOH A 19 419 49 HOH HOH . I 3 HOH A 20 420 50 HOH HOH . I 3 HOH A 21 421 52 HOH HOH . I 3 HOH A 22 422 53 HOH HOH . I 3 HOH A 23 423 79 HOH HOH . I 3 HOH A 24 424 80 HOH HOH . I 3 HOH A 25 425 81 HOH HOH . I 3 HOH A 26 426 82 HOH HOH . I 3 HOH A 27 427 83 HOH HOH . I 3 HOH A 28 428 84 HOH HOH . I 3 HOH A 29 429 86 HOH HOH . I 3 HOH A 30 430 87 HOH HOH . I 3 HOH A 31 431 92 HOH HOH . I 3 HOH A 32 432 95 HOH HOH . I 3 HOH A 33 433 97 HOH HOH . I 3 HOH A 34 434 100 HOH HOH . I 3 HOH A 35 435 107 HOH HOH . I 3 HOH A 36 436 111 HOH HOH . I 3 HOH A 37 437 113 HOH HOH . I 3 HOH A 38 438 114 HOH HOH . I 3 HOH A 39 439 115 HOH HOH . I 3 HOH A 40 440 118 HOH HOH . I 3 HOH A 41 441 121 HOH HOH . I 3 HOH A 42 442 127 HOH HOH . I 3 HOH A 43 443 128 HOH HOH . I 3 HOH A 44 444 130 HOH HOH . I 3 HOH A 45 445 134 HOH HOH . I 3 HOH A 46 446 136 HOH HOH . I 3 HOH A 47 447 137 HOH HOH . I 3 HOH A 48 448 142 HOH HOH . I 3 HOH A 49 449 146 HOH HOH . I 3 HOH A 50 450 147 HOH HOH . I 3 HOH A 51 451 150 HOH HOH . I 3 HOH A 52 452 151 HOH HOH . I 3 HOH A 53 453 154 HOH HOH . I 3 HOH A 54 454 159 HOH HOH . I 3 HOH A 55 455 164 HOH HOH . I 3 HOH A 56 456 165 HOH HOH . I 3 HOH A 57 457 166 HOH HOH . I 3 HOH A 58 458 174 HOH HOH . I 3 HOH A 59 459 178 HOH HOH . I 3 HOH A 60 460 180 HOH HOH . I 3 HOH A 61 461 186 HOH HOH . I 3 HOH A 62 462 187 HOH HOH . I 3 HOH A 63 463 193 HOH HOH . I 3 HOH A 64 464 203 HOH HOH . J 3 HOH B 1 401 4 HOH HOH . J 3 HOH B 2 402 5 HOH HOH . J 3 HOH B 3 403 7 HOH HOH . J 3 HOH B 4 404 9 HOH HOH . J 3 HOH B 5 405 10 HOH HOH . J 3 HOH B 6 406 11 HOH HOH . J 3 HOH B 7 407 14 HOH HOH . J 3 HOH B 8 408 16 HOH HOH . J 3 HOH B 9 409 17 HOH HOH . J 3 HOH B 10 410 19 HOH HOH . J 3 HOH B 11 411 24 HOH HOH . J 3 HOH B 12 412 25 HOH HOH . J 3 HOH B 13 413 51 HOH HOH . J 3 HOH B 14 414 54 HOH HOH . J 3 HOH B 15 415 55 HOH HOH . J 3 HOH B 16 416 56 HOH HOH . J 3 HOH B 17 417 57 HOH HOH . J 3 HOH B 18 418 58 HOH HOH . J 3 HOH B 19 419 59 HOH HOH . J 3 HOH B 20 420 60 HOH HOH . J 3 HOH B 21 421 61 HOH HOH . J 3 HOH B 22 422 62 HOH HOH . J 3 HOH B 23 423 63 HOH HOH . J 3 HOH B 24 424 64 HOH HOH . J 3 HOH B 25 425 65 HOH HOH . J 3 HOH B 26 426 78 HOH HOH . J 3 HOH B 27 427 85 HOH HOH . J 3 HOH B 28 428 93 HOH HOH . J 3 HOH B 29 429 94 HOH HOH . J 3 HOH B 30 430 102 HOH HOH . J 3 HOH B 31 431 104 HOH HOH . J 3 HOH B 32 432 110 HOH HOH . J 3 HOH B 33 433 117 HOH HOH . J 3 HOH B 34 434 122 HOH HOH . J 3 HOH B 35 435 129 HOH HOH . J 3 HOH B 36 436 133 HOH HOH . J 3 HOH B 37 437 135 HOH HOH . J 3 HOH B 38 438 138 HOH HOH . J 3 HOH B 39 439 139 HOH HOH . J 3 HOH B 40 440 140 HOH HOH . J 3 HOH B 41 441 141 HOH HOH . J 3 HOH B 42 442 145 HOH HOH . J 3 HOH B 43 443 152 HOH HOH . J 3 HOH B 44 444 153 HOH HOH . J 3 HOH B 45 445 156 HOH HOH . J 3 HOH B 46 446 157 HOH HOH . J 3 HOH B 47 447 158 HOH HOH . J 3 HOH B 48 448 160 HOH HOH . J 3 HOH B 49 449 161 HOH HOH . J 3 HOH B 50 450 162 HOH HOH . J 3 HOH B 51 451 175 HOH HOH . J 3 HOH B 52 452 176 HOH HOH . J 3 HOH B 53 453 177 HOH HOH . J 3 HOH B 54 454 181 HOH HOH . J 3 HOH B 55 455 182 HOH HOH . J 3 HOH B 56 456 183 HOH HOH . J 3 HOH B 57 457 184 HOH HOH . J 3 HOH B 58 458 185 HOH HOH . J 3 HOH B 59 459 196 HOH HOH . J 3 HOH B 60 460 197 HOH HOH . J 3 HOH B 61 461 198 HOH HOH . J 3 HOH B 62 462 200 HOH HOH . J 3 HOH B 63 463 201 HOH HOH . K 3 HOH C 1 401 8 HOH HOH . K 3 HOH C 2 402 21 HOH HOH . K 3 HOH C 3 403 26 HOH HOH . K 3 HOH C 4 404 27 HOH HOH . K 3 HOH C 5 405 34 HOH HOH . K 3 HOH C 6 406 45 HOH HOH . K 3 HOH C 7 407 46 HOH HOH . K 3 HOH C 8 408 47 HOH HOH . K 3 HOH C 9 409 66 HOH HOH . K 3 HOH C 10 410 67 HOH HOH . K 3 HOH C 11 411 69 HOH HOH . K 3 HOH C 12 412 88 HOH HOH . K 3 HOH C 13 413 90 HOH HOH . K 3 HOH C 14 414 98 HOH HOH . K 3 HOH C 15 415 99 HOH HOH . K 3 HOH C 16 416 103 HOH HOH . K 3 HOH C 17 417 112 HOH HOH . K 3 HOH C 18 418 123 HOH HOH . K 3 HOH C 19 419 124 HOH HOH . K 3 HOH C 20 420 132 HOH HOH . K 3 HOH C 21 421 155 HOH HOH . K 3 HOH C 22 422 167 HOH HOH . K 3 HOH C 23 423 168 HOH HOH . K 3 HOH C 24 424 169 HOH HOH . K 3 HOH C 25 425 170 HOH HOH . K 3 HOH C 26 426 179 HOH HOH . K 3 HOH C 27 427 188 HOH HOH . K 3 HOH C 28 428 199 HOH HOH . K 3 HOH C 29 429 202 HOH HOH . K 3 HOH C 30 430 204 HOH HOH . L 3 HOH D 1 401 12 HOH HOH . L 3 HOH D 2 402 18 HOH HOH . L 3 HOH D 3 403 20 HOH HOH . L 3 HOH D 4 404 23 HOH HOH . L 3 HOH D 5 405 28 HOH HOH . L 3 HOH D 6 406 29 HOH HOH . L 3 HOH D 7 407 30 HOH HOH . L 3 HOH D 8 408 32 HOH HOH . L 3 HOH D 9 409 36 HOH HOH . L 3 HOH D 10 410 39 HOH HOH . L 3 HOH D 11 411 68 HOH HOH . L 3 HOH D 12 412 70 HOH HOH . L 3 HOH D 13 413 71 HOH HOH . L 3 HOH D 14 414 72 HOH HOH . L 3 HOH D 15 415 73 HOH HOH . L 3 HOH D 16 416 74 HOH HOH . L 3 HOH D 17 417 75 HOH HOH . L 3 HOH D 18 418 76 HOH HOH . L 3 HOH D 19 419 77 HOH HOH . L 3 HOH D 20 420 89 HOH HOH . L 3 HOH D 21 421 91 HOH HOH . L 3 HOH D 22 422 96 HOH HOH . L 3 HOH D 23 423 101 HOH HOH . L 3 HOH D 24 424 105 HOH HOH . L 3 HOH D 25 425 106 HOH HOH . L 3 HOH D 26 426 108 HOH HOH . L 3 HOH D 27 427 109 HOH HOH . L 3 HOH D 28 428 116 HOH HOH . L 3 HOH D 29 429 119 HOH HOH . L 3 HOH D 30 430 120 HOH HOH . L 3 HOH D 31 431 125 HOH HOH . L 3 HOH D 32 432 126 HOH HOH . L 3 HOH D 33 433 131 HOH HOH . L 3 HOH D 34 434 143 HOH HOH . L 3 HOH D 35 435 144 HOH HOH . L 3 HOH D 36 436 148 HOH HOH . L 3 HOH D 37 437 149 HOH HOH . L 3 HOH D 38 438 163 HOH HOH . L 3 HOH D 39 439 171 HOH HOH . L 3 HOH D 40 440 172 HOH HOH . L 3 HOH D 41 441 173 HOH HOH . L 3 HOH D 42 442 189 HOH HOH . L 3 HOH D 43 443 190 HOH HOH . L 3 HOH D 44 444 191 HOH HOH . L 3 HOH D 45 445 192 HOH HOH . L 3 HOH D 46 446 194 HOH HOH . L 3 HOH D 47 447 195 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 2 34.018 -36.804 -10.045 1 55.31 ? C1 EDO 503 D 1 HETATM 2 O O1 EDO . . . H 2 34.588 -37.977 -9.452 1 54.91 ? O1 EDO 503 D 1 HETATM 3 C C2 EDO . . . H 2 34.661 -35.555 -9.447 1 55.32 ? C2 EDO 503 D 1 HETATM 4 O O2 EDO . . . H 2 36.072 -35.564 -9.699 1 54.97 ? O2 EDO 503 D 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 4 #