data_3SMP # _model_server_result.job_id mSc0wTJduHx8zlB7gCbSEw _model_server_result.datetime_utc '2025-06-28 16:21:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3smp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1001}' # _entry.id 3SMP # _exptl.entry_id 3SMP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.2 _cell.angle_gamma 90 _cell.entry_id 3SMP _cell.length_a 152.68 _cell.length_b 66.68 _cell.length_c 88.16 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SMP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 M N N # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 3SMP _atom_sites.fract_transf_matrix[1][1] 0.00655 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000252 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014997 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011351 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ARS A 1 2397 2397 ARS ARS . D 2 ARS A 1 2301 2301 ARS ARS . E 3 ACO A 1 1001 1001 ACO ACO . F 2 ARS A 1 2337 2337 ARS ARS . G 2 ARS A 1 2385 2385 ARS ARS . H 4 CL A 1 3001 3001 CL CL . I 4 CL A 1 3002 3002 CL CL . J 5 UNX A 1 4005 4005 UNX UNX . K 5 UNX A 1 4013 4013 UNX UNX . L 5 UNX A 1 4017 4017 UNX UNX . M 3 ACO B 1 1001 1001 ACO ACO . N 2 ARS B 1 2301 2301 ARS ARS . O 2 ARS B 1 2385 2385 ARS ARS . P 4 CL B 1 3597 3597 CL CL . Q 4 CL B 1 3598 3598 CL CL . R 4 CL B 1 3599 3599 CL CL . S 5 UNX B 1 4003 4003 UNX UNX . T 5 UNX B 1 4006 4006 UNX UNX . U 5 UNX B 1 4016 4016 UNX UNX . V 6 HOH A 1 6002 6002 HOH HOH . V 6 HOH A 2 6006 6006 HOH HOH . V 6 HOH A 3 6007 6007 HOH HOH . V 6 HOH A 4 6008 6008 HOH HOH . V 6 HOH A 5 6009 6009 HOH HOH . V 6 HOH A 6 6018 6018 HOH HOH . V 6 HOH A 7 6019 6019 HOH HOH . V 6 HOH A 8 6020 6020 HOH HOH . V 6 HOH A 9 6022 6022 HOH HOH . V 6 HOH A 10 6023 6023 HOH HOH . V 6 HOH A 11 6024 6024 HOH HOH . V 6 HOH A 12 6026 6026 HOH HOH . V 6 HOH A 13 6032 6032 HOH HOH . V 6 HOH A 14 6033 6033 HOH HOH . V 6 HOH A 15 6036 6036 HOH HOH . V 6 HOH A 16 6037 6037 HOH HOH . V 6 HOH A 17 6038 6038 HOH HOH . V 6 HOH A 18 6041 6041 HOH HOH . V 6 HOH A 19 6042 6042 HOH HOH . V 6 HOH A 20 6044 6044 HOH HOH . V 6 HOH A 21 6050 6050 HOH HOH . V 6 HOH A 22 6051 6051 HOH HOH . V 6 HOH A 23 6052 6052 HOH HOH . V 6 HOH A 24 6056 6056 HOH HOH . V 6 HOH A 25 6060 6060 HOH HOH . V 6 HOH A 26 6061 6061 HOH HOH . V 6 HOH A 27 6067 6067 HOH HOH . V 6 HOH A 28 6068 6068 HOH HOH . V 6 HOH A 29 6072 6072 HOH HOH . V 6 HOH A 30 6073 6073 HOH HOH . V 6 HOH A 31 6075 6075 HOH HOH . V 6 HOH A 32 6076 6076 HOH HOH . V 6 HOH A 33 6078 6078 HOH HOH . V 6 HOH A 34 6079 6079 HOH HOH . V 6 HOH A 35 6080 6080 HOH HOH . V 6 HOH A 36 6081 6081 HOH HOH . V 6 HOH A 37 6082 6082 HOH HOH . V 6 HOH A 38 6086 6086 HOH HOH . V 6 HOH A 39 6087 6087 HOH HOH . V 6 HOH A 40 6089 6089 HOH HOH . V 6 HOH A 41 6090 6090 HOH HOH . V 6 HOH A 42 6094 6094 HOH HOH . V 6 HOH A 43 6096 6096 HOH HOH . V 6 HOH A 44 6097 6097 HOH HOH . V 6 HOH A 45 6100 6100 HOH HOH . V 6 HOH A 46 6101 6101 HOH HOH . V 6 HOH A 47 6103 6103 HOH HOH . V 6 HOH A 48 6104 6104 HOH HOH . V 6 HOH A 49 6108 6108 HOH HOH . V 6 HOH A 50 6109 6109 HOH HOH . V 6 HOH A 51 6111 6111 HOH HOH . V 6 HOH A 52 6113 6113 HOH HOH . V 6 HOH A 53 6115 6115 HOH HOH . V 6 HOH A 54 6117 6117 HOH HOH . V 6 HOH A 55 6119 6119 HOH HOH . V 6 HOH A 56 6123 6123 HOH HOH . V 6 HOH A 57 6125 6125 HOH HOH . V 6 HOH A 58 6126 6126 HOH HOH . V 6 HOH A 59 6127 6127 HOH HOH . V 6 HOH A 60 6128 6128 HOH HOH . V 6 HOH A 61 6129 6129 HOH HOH . V 6 HOH A 62 6130 6130 HOH HOH . V 6 HOH A 63 6141 6141 HOH HOH . V 6 HOH A 64 6142 6142 HOH HOH . V 6 HOH A 65 6143 6143 HOH HOH . V 6 HOH A 66 6145 6145 HOH HOH . V 6 HOH A 67 6147 6147 HOH HOH . V 6 HOH A 68 6148 6148 HOH HOH . V 6 HOH A 69 6149 6149 HOH HOH . V 6 HOH A 70 6599 6599 HOH HOH . V 6 HOH A 71 6600 6600 HOH HOH . W 6 HOH B 1 6012 6012 HOH HOH . W 6 HOH B 2 6015 6015 HOH HOH . W 6 HOH B 3 6021 6021 HOH HOH . W 6 HOH B 4 6028 6028 HOH HOH . W 6 HOH B 5 6029 6029 HOH HOH . W 6 HOH B 6 6030 6030 HOH HOH . W 6 HOH B 7 6031 6031 HOH HOH . W 6 HOH B 8 6034 6034 HOH HOH . W 6 HOH B 9 6040 6040 HOH HOH . W 6 HOH B 10 6046 6046 HOH HOH . W 6 HOH B 11 6047 6047 HOH HOH . W 6 HOH B 12 6048 6048 HOH HOH . W 6 HOH B 13 6049 6049 HOH HOH . W 6 HOH B 14 6053 6053 HOH HOH . W 6 HOH B 15 6054 6054 HOH HOH . W 6 HOH B 16 6064 6064 HOH HOH . W 6 HOH B 17 6065 6065 HOH HOH . W 6 HOH B 18 6066 6066 HOH HOH . W 6 HOH B 19 6069 6069 HOH HOH . W 6 HOH B 20 6077 6077 HOH HOH . W 6 HOH B 21 6083 6083 HOH HOH . W 6 HOH B 22 6084 6084 HOH HOH . W 6 HOH B 23 6088 6088 HOH HOH . W 6 HOH B 24 6091 6091 HOH HOH . W 6 HOH B 25 6093 6093 HOH HOH . W 6 HOH B 26 6099 6099 HOH HOH . W 6 HOH B 27 6106 6106 HOH HOH . W 6 HOH B 28 6107 6107 HOH HOH . W 6 HOH B 29 6112 6112 HOH HOH . W 6 HOH B 30 6114 6114 HOH HOH . W 6 HOH B 31 6116 6116 HOH HOH . W 6 HOH B 32 6118 6118 HOH HOH . W 6 HOH B 33 6120 6120 HOH HOH . W 6 HOH B 34 6121 6121 HOH HOH . W 6 HOH B 35 6122 6122 HOH HOH . W 6 HOH B 36 6124 6124 HOH HOH . W 6 HOH B 37 6131 6131 HOH HOH . W 6 HOH B 38 6132 6132 HOH HOH . W 6 HOH B 39 6133 6133 HOH HOH . W 6 HOH B 40 6134 6134 HOH HOH . W 6 HOH B 41 6135 6135 HOH HOH . W 6 HOH B 42 6136 6136 HOH HOH . W 6 HOH B 43 6137 6137 HOH HOH . W 6 HOH B 44 6138 6138 HOH HOH . W 6 HOH B 45 6139 6139 HOH HOH . W 6 HOH B 46 6140 6140 HOH HOH . W 6 HOH B 47 6144 6144 HOH HOH . W 6 HOH B 48 6146 6146 HOH HOH . W 6 HOH B 49 6150 6150 HOH HOH . W 6 HOH B 50 6151 6151 HOH HOH . W 6 HOH B 51 6152 6152 HOH HOH . W 6 HOH B 52 6600 6600 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . E 3 26.721 -22.452 39.72 1 81.67 ? N1A ACO 1001 A 1 HETATM 2 C C2A ACO . . . E 3 25.666 -23.142 39.291 1 80.34 ? C2A ACO 1001 A 1 HETATM 3 N N3A ACO . . . E 3 24.556 -22.537 38.881 1 78.21 ? N3A ACO 1001 A 1 HETATM 4 C C4A ACO . . . E 3 24.46 -21.191 38.895 1 78.37 ? C4A ACO 1001 A 1 HETATM 5 C C5A ACO . . . E 3 25.542 -20.438 39.337 1 80.18 ? C5A ACO 1001 A 1 HETATM 6 C C6A ACO . . . E 3 26.69 -21.105 39.754 1 81.72 ? C6A ACO 1001 A 1 HETATM 7 N N6A ACO . . . E 3 27.737 -20.411 40.179 1 83.59 ? N6A ACO 1001 A 1 HETATM 8 N N7A ACO . . . E 3 25.204 -19.149 39.255 1 79.81 ? N7A ACO 1001 A 1 HETATM 9 C C8A ACO . . . E 3 23.957 -19.083 38.778 1 78.27 ? C8A ACO 1001 A 1 HETATM 10 N N9A ACO . . . E 3 23.5 -20.323 38.553 1 77.3 ? N9A ACO 1001 A 1 HETATM 11 C C1B ACO . . . E 3 22.14 -20.662 38.021 1 75.32 ? C1B ACO 1001 A 1 HETATM 12 C C2B ACO . . . E 3 21.111 -19.555 38.261 1 75.39 ? C2B ACO 1001 A 1 HETATM 13 O O2B ACO . . . E 3 20.837 -19.42 39.665 1 76.04 ? O2B ACO 1001 A 1 HETATM 14 C C3B ACO . . . E 3 19.929 -20.184 37.523 1 73.8 ? C3B ACO 1001 A 1 HETATM 15 O O3B ACO . . . E 3 19.369 -21.248 38.319 1 76.79 ? O3B ACO 1001 A 1 HETATM 16 P P3B ACO . . . E 3 17.763 -21.415 38.505 1 78.11 ? P3B ACO 1001 A 1 HETATM 17 O O7A ACO . . . E 3 17.102 -21.754 37.21 1 74.79 ? O7A ACO 1001 A 1 HETATM 18 O O8A ACO . . . E 3 17.211 -20.068 39.24 1 78.45 ? O8A ACO 1001 A 1 HETATM 19 O O9A ACO . . . E 3 17.63 -22.54 39.661 1 78.42 ? O9A ACO 1001 A 1 HETATM 20 C C4B ACO . . . E 3 20.6 -20.779 36.271 1 70.66 ? C4B ACO 1001 A 1 HETATM 21 O O4B ACO . . . E 3 22.044 -20.851 36.567 1 72.61 ? O4B ACO 1001 A 1 HETATM 22 C C5B ACO . . . E 3 20.336 -19.807 35.122 1 66.12 ? C5B ACO 1001 A 1 HETATM 23 O O5B ACO . . . E 3 18.994 -19.923 34.604 1 60.86 ? O5B ACO 1001 A 1 HETATM 24 P P1A ACO . . . E 3 18.844 -20.21 33.029 1 59.15 ? P1A ACO 1001 A 1 HETATM 25 O O1A ACO . . . E 3 17.505 -20.72 32.678 1 55.9 ? O1A ACO 1001 A 1 HETATM 26 O O2A ACO . . . E 3 19.438 -19.049 32.309 1 56.13 ? O2A ACO 1001 A 1 HETATM 27 O O3A ACO . . . E 3 19.856 -21.46 32.881 1 54.01 ? O3A ACO 1001 A 1 HETATM 28 P P2A ACO . . . E 3 20.209 -22.07 31.446 1 50.1 ? P2A ACO 1001 A 1 HETATM 29 O O4A ACO . . . E 3 19.901 -23.526 31.464 1 51.22 ? O4A ACO 1001 A 1 HETATM 30 O O5A ACO . . . E 3 19.645 -21.235 30.359 1 46.03 ? O5A ACO 1001 A 1 HETATM 31 O O6A ACO . . . E 3 21.843 -22.043 31.536 1 44.66 ? O6A ACO 1001 A 1 HETATM 32 C CBP ACO . . . E 3 23.462 -21.113 29.968 1 37.87 ? CBP ACO 1001 A 1 HETATM 33 C CCP ACO . . . E 3 22.567 -20.887 31.196 1 41.01 ? CCP ACO 1001 A 1 HETATM 34 C CDP ACO . . . E 3 24.263 -19.827 29.755 1 36.39 ? CDP ACO 1001 A 1 HETATM 35 C CEP ACO . . . E 3 24.42 -22.314 30.213 1 34.25 ? CEP ACO 1001 A 1 HETATM 36 C CAP ACO . . . E 3 22.551 -21.356 28.741 1 35.63 ? CAP ACO 1001 A 1 HETATM 37 O OAP ACO . . . E 3 21.522 -20.347 28.656 1 34.42 ? OAP ACO 1001 A 1 HETATM 38 C C9P ACO . . . E 3 23.387 -21.389 27.427 1 33.77 ? C9P ACO 1001 A 1 HETATM 39 O O9P ACO . . . E 3 24.208 -22.296 27.252 1 35.04 ? O9P ACO 1001 A 1 HETATM 40 N N8P ACO . . . E 3 23.183 -20.36 26.591 1 33.14 ? N8P ACO 1001 A 1 HETATM 41 C C7P ACO . . . E 3 23.891 -20.193 25.315 1 35.37 ? C7P ACO 1001 A 1 HETATM 42 C C6P ACO . . . E 3 25.325 -19.732 25.58 1 37.44 ? C6P ACO 1001 A 1 HETATM 43 C C5P ACO . . . E 3 26.077 -19.56 24.278 1 37.7 ? C5P ACO 1001 A 1 HETATM 44 O O5P ACO . . . E 3 26.535 -20.529 23.665 1 37.78 ? O5P ACO 1001 A 1 HETATM 45 N N4P ACO . . . E 3 26.194 -18.302 23.863 1 38.25 ? N4P ACO 1001 A 1 HETATM 46 C C3P ACO . . . E 3 26.91 -17.97 22.628 1 38.16 ? C3P ACO 1001 A 1 HETATM 47 C C2P ACO . . . E 3 26.064 -16.981 21.812 1 37.32 ? C2P ACO 1001 A 1 HETATM 48 S S1P ACO . . . E 3 26.908 -16.391 20.308 1 38.14 ? S1P ACO 1001 A 1 HETATM 49 C C ACO . . . E 3 27.627 -14.914 20.965 1 38.85 ? C ACO 1001 A 1 HETATM 50 O O ACO . . . E 3 27.302 -14.533 22.091 1 39.03 ? O ACO 1001 A 1 HETATM 51 C CH3 ACO . . . E 3 28.653 -14.131 20.13 1 39.47 ? CH3 ACO 1001 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 705 _model_server_stats.encode_time_ms 40 _model_server_stats.element_count 51 #