data_3SO9 # _model_server_result.job_id d9wQk819zb7W87ND0KWAUg _model_server_result.datetime_utc '2024-11-05 16:41:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3so9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":100}' # _entry.id 3SO9 # _exptl.entry_id 3SO9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 547.664 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3SO9 _cell.length_a 28.901 _cell.length_b 66.376 _cell.length_c 90.839 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SO9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H37 N3 O7 S' _chem_comp.formula_weight 547.664 _chem_comp.id 017 _chem_comp.mon_nstd_flag . _chem_comp.name (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Darunavir;TMC114;UIC-94017 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 017 sing 1 n n N1 H11 017 sing 2 n n N1 H12 017 sing 3 n n C2 C3 017 doub 4 n y C2 C7 017 sing 5 n y C3 C4 017 sing 6 n y C3 H3 017 sing 7 n n C4 C5 017 doub 8 n y C4 H4 017 sing 9 n n C5 C6 017 sing 10 n y C5 S8 017 sing 11 n n C6 C7 017 doub 12 n y C6 H6 017 sing 13 n n C7 H7 017 sing 14 n n S8 O9 017 doub 15 n n S8 O10 017 doub 16 n n S8 N11 017 sing 17 n n N11 C12 017 sing 18 n n N11 C16 017 sing 19 n n C12 C13 017 sing 20 n n C12 H121 017 sing 21 n n C12 H122 017 sing 22 n n C13 C14 017 sing 23 n n C13 C15 017 sing 24 n n C13 H13 017 sing 25 n n C14 H141 017 sing 26 n n C14 H142 017 sing 27 n n C14 H143 017 sing 28 n n C15 H151 017 sing 29 n n C15 H152 017 sing 30 n n C15 H153 017 sing 31 n n C16 C17 017 sing 32 n n C16 H161 017 sing 33 n n C16 H162 017 sing 34 n n C17 O18 017 sing 35 n n C17 C19 017 sing 36 n n C17 H17 017 sing 37 n n O18 H18 017 sing 38 n n C19 N20 017 sing 39 n n C19 C32 017 sing 40 n n C19 H19 017 sing 41 n n N20 C21 017 sing 42 n n N20 H20 017 sing 43 n n C21 O22 017 doub 44 n n C21 O23 017 sing 45 n n O23 C24 017 sing 46 n n C24 C25 017 sing 47 n n C24 C31 017 sing 48 n n C24 H24 017 sing 49 n n C25 O26 017 sing 50 n n C25 H251 017 sing 51 n n C25 H252 017 sing 52 n n O26 C27 017 sing 53 n n C27 O28 017 sing 54 n n C27 C31 017 sing 55 n n C27 H27 017 sing 56 n n O28 C29 017 sing 57 n n C29 C30 017 sing 58 n n C29 H291 017 sing 59 n n C29 H292 017 sing 60 n n C30 C31 017 sing 61 n n C30 H301 017 sing 62 n n C30 H302 017 sing 63 n n C31 H31 017 sing 64 n n C32 C38 017 sing 65 n n C32 H321 017 sing 66 n n C32 H322 017 sing 67 n n C33 C34 017 doub 68 n y C33 C38 017 sing 69 n y C33 H33 017 sing 70 n n C34 C35 017 sing 71 n y C34 H34 017 sing 72 n n C35 C36 017 doub 73 n y C35 H35 017 sing 74 n n C36 C37 017 sing 75 n y C36 H36 017 sing 76 n n C37 C38 017 doub 77 n y C37 H37 017 sing 78 n n # _atom_sites.entry_id 3SO9 _atom_sites.fract_transf_matrix[1][1] 0.034601 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015066 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011008 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 017 A 1 100 1 017 017 . D 3 HOH A 1 101 101 HOH HOH . D 3 HOH A 2 102 24 HOH HOH . D 3 HOH A 3 103 2 HOH HOH . D 3 HOH A 4 104 122 HOH HOH . D 3 HOH A 5 105 64 HOH HOH . D 3 HOH A 6 106 4 HOH HOH . D 3 HOH A 7 107 78 HOH HOH . D 3 HOH A 8 108 108 HOH HOH . D 3 HOH A 9 109 6 HOH HOH . D 3 HOH A 10 110 7 HOH HOH . D 3 HOH A 11 111 8 HOH HOH . D 3 HOH A 12 112 9 HOH HOH . D 3 HOH A 13 113 10 HOH HOH . D 3 HOH A 14 114 11 HOH HOH . D 3 HOH A 15 115 14 HOH HOH . D 3 HOH A 16 116 83 HOH HOH . D 3 HOH A 17 117 117 HOH HOH . D 3 HOH A 18 118 118 HOH HOH . D 3 HOH A 19 119 119 HOH HOH . D 3 HOH A 20 120 120 HOH HOH . D 3 HOH A 21 121 121 HOH HOH . D 3 HOH A 22 122 15 HOH HOH . D 3 HOH A 23 123 16 HOH HOH . D 3 HOH A 24 125 19 HOH HOH . D 3 HOH A 25 126 126 HOH HOH . D 3 HOH A 26 127 127 HOH HOH . D 3 HOH A 27 128 128 HOH HOH . D 3 HOH A 28 129 129 HOH HOH . D 3 HOH A 29 130 130 HOH HOH . D 3 HOH A 30 131 131 HOH HOH . D 3 HOH A 31 132 132 HOH HOH . D 3 HOH A 32 133 21 HOH HOH . D 3 HOH A 33 134 22 HOH HOH . D 3 HOH A 34 135 135 HOH HOH . D 3 HOH A 35 136 136 HOH HOH . D 3 HOH A 36 137 137 HOH HOH . D 3 HOH A 37 138 23 HOH HOH . D 3 HOH A 38 139 26 HOH HOH . D 3 HOH A 39 142 28 HOH HOH . D 3 HOH A 40 144 30 HOH HOH . D 3 HOH A 41 145 31 HOH HOH . D 3 HOH A 42 146 34 HOH HOH . D 3 HOH A 43 147 35 HOH HOH . D 3 HOH A 44 148 36 HOH HOH . D 3 HOH A 45 149 38 HOH HOH . D 3 HOH A 46 150 39 HOH HOH . D 3 HOH A 47 151 40 HOH HOH . D 3 HOH A 48 153 43 HOH HOH . D 3 HOH A 49 154 44 HOH HOH . D 3 HOH A 50 155 45 HOH HOH . D 3 HOH A 51 157 51 HOH HOH . D 3 HOH A 52 158 53 HOH HOH . D 3 HOH A 53 159 58 HOH HOH . D 3 HOH A 54 160 59 HOH HOH . D 3 HOH A 55 161 61 HOH HOH . D 3 HOH A 56 163 67 HOH HOH . D 3 HOH A 57 164 68 HOH HOH . D 3 HOH A 58 165 69 HOH HOH . D 3 HOH A 59 166 70 HOH HOH . D 3 HOH A 60 167 71 HOH HOH . D 3 HOH A 61 168 72 HOH HOH . D 3 HOH A 62 169 74 HOH HOH . D 3 HOH A 63 171 81 HOH HOH . D 3 HOH A 64 172 82 HOH HOH . D 3 HOH A 65 173 84 HOH HOH . D 3 HOH A 66 174 85 HOH HOH . D 3 HOH A 67 175 87 HOH HOH . D 3 HOH A 68 176 89 HOH HOH . D 3 HOH A 69 177 90 HOH HOH . D 3 HOH A 70 178 92 HOH HOH . D 3 HOH A 71 179 95 HOH HOH . E 3 HOH B 1 100 100 HOH HOH . E 3 HOH B 2 101 12 HOH HOH . E 3 HOH B 3 102 1 HOH HOH . E 3 HOH B 4 103 103 HOH HOH . E 3 HOH B 5 104 3 HOH HOH . E 3 HOH B 6 105 105 HOH HOH . E 3 HOH B 7 106 106 HOH HOH . E 3 HOH B 8 107 5 HOH HOH . E 3 HOH B 9 108 18 HOH HOH . E 3 HOH B 10 109 109 HOH HOH . E 3 HOH B 11 110 110 HOH HOH . E 3 HOH B 12 111 111 HOH HOH . E 3 HOH B 13 112 112 HOH HOH . E 3 HOH B 14 113 113 HOH HOH . E 3 HOH B 15 114 114 HOH HOH . E 3 HOH B 16 115 115 HOH HOH . E 3 HOH B 17 116 116 HOH HOH . E 3 HOH B 18 117 102 HOH HOH . E 3 HOH B 19 118 25 HOH HOH . E 3 HOH B 20 119 32 HOH HOH . E 3 HOH B 21 120 33 HOH HOH . E 3 HOH B 22 121 37 HOH HOH . E 3 HOH B 23 122 104 HOH HOH . E 3 HOH B 24 123 123 HOH HOH . E 3 HOH B 25 124 17 HOH HOH . E 3 HOH B 26 125 125 HOH HOH . E 3 HOH B 27 126 42 HOH HOH . E 3 HOH B 28 127 46 HOH HOH . E 3 HOH B 29 128 47 HOH HOH . E 3 HOH B 30 129 49 HOH HOH . E 3 HOH B 31 130 50 HOH HOH . E 3 HOH B 32 131 52 HOH HOH . E 3 HOH B 33 132 54 HOH HOH . E 3 HOH B 34 133 133 HOH HOH . E 3 HOH B 35 134 134 HOH HOH . E 3 HOH B 36 135 55 HOH HOH . E 3 HOH B 37 136 56 HOH HOH . E 3 HOH B 38 137 57 HOH HOH . E 3 HOH B 39 138 138 HOH HOH . E 3 HOH B 40 139 139 HOH HOH . E 3 HOH B 41 140 27 HOH HOH . E 3 HOH B 42 141 141 HOH HOH . E 3 HOH B 43 142 142 HOH HOH . E 3 HOH B 44 143 29 HOH HOH . E 3 HOH B 45 144 63 HOH HOH . E 3 HOH B 46 145 13 HOH HOH . E 3 HOH B 47 146 65 HOH HOH . E 3 HOH B 48 147 73 HOH HOH . E 3 HOH B 49 148 75 HOH HOH . E 3 HOH B 50 149 76 HOH HOH . E 3 HOH B 51 150 77 HOH HOH . E 3 HOH B 52 151 107 HOH HOH . E 3 HOH B 53 152 41 HOH HOH . E 3 HOH B 54 153 20 HOH HOH . E 3 HOH B 55 154 86 HOH HOH . E 3 HOH B 56 155 88 HOH HOH . E 3 HOH B 57 156 48 HOH HOH . E 3 HOH B 58 157 93 HOH HOH . E 3 HOH B 59 158 94 HOH HOH . E 3 HOH B 60 159 96 HOH HOH . E 3 HOH B 61 160 97 HOH HOH . E 3 HOH B 62 161 98 HOH HOH . E 3 HOH B 63 162 66 HOH HOH . E 3 HOH B 64 163 124 HOH HOH . E 3 HOH B 65 164 140 HOH HOH . E 3 HOH B 66 165 60 HOH HOH . E 3 HOH B 67 166 62 HOH HOH . E 3 HOH B 68 167 79 HOH HOH . E 3 HOH B 69 168 91 HOH HOH . E 3 HOH B 70 169 99 HOH HOH . E 3 HOH B 71 170 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 017 . . . C 2 15.997 -8.655 -16.307 1 43.22 ? N1 017 100 A 1 HETATM 2 C C2 017 . . . C 2 15.571 -8.872 -15.041 1 42.75 ? C2 017 100 A 1 HETATM 3 C C3 017 . . . C 2 16.076 -9.962 -14.329 1 42.75 ? C3 017 100 A 1 HETATM 4 C C4 017 . . . C 2 15.659 -10.186 -13.023 1 42.05 ? C4 017 100 A 1 HETATM 5 C C5 017 . . . C 2 14.786 -9.288 -12.399 1 42.26 ? C5 017 100 A 1 HETATM 6 C C6 017 . . . C 2 14.221 -8.234 -13.141 1 42.46 ? C6 017 100 A 1 HETATM 7 C C7 017 . . . C 2 14.65 -7.998 -14.444 1 42.55 ? C7 017 100 A 1 HETATM 8 S S8 017 . . . C 2 14.253 -9.663 -10.943 1 42.37 ? S8 017 100 A 1 HETATM 9 O O9 017 . . . C 2 14.652 -11.004 -10.667 1 43.46 ? O9 017 100 A 1 HETATM 10 O O10 017 . . . C 2 12.825 -9.602 -10.981 1 40.22 ? O10 017 100 A 1 HETATM 11 N N11 017 . . . C 2 14.763 -8.806 -9.791 1 39.37 ? N11 017 100 A 1 HETATM 12 C C12 017 . . . C 2 15.565 -9.475 -8.77 1 38.05 ? C12 017 100 A 1 HETATM 13 C C13 017 . . . C 2 16.314 -8.382 -8.013 1 36.95 ? C13 017 100 A 1 HETATM 14 C C14 017 . . . C 2 17.712 -8.14 -8.591 1 32.25 ? C14 017 100 A 1 HETATM 15 C C15 017 . . . C 2 16.359 -8.699 -6.522 1 35.65 ? C15 017 100 A 1 HETATM 16 C C16 017 . . . C 2 14.467 -7.374 -9.699 1 34.72 ? C16 017 100 A 1 HETATM 17 C C17 017 . . . C 2 13.452 -7.074 -8.577 1 32.23 ? C17 017 100 A 1 HETATM 18 O O18 017 . . . C 2 12.956 -5.742 -8.822 1 33.58 ? O18 017 100 A 1 HETATM 19 C C19 017 . . . C 2 12.225 -7.981 -8.491 1 31.93 ? C19 017 100 A 1 HETATM 20 N N20 017 . . . C 2 11.624 -7.913 -7.162 1 32.32 ? N20 017 100 A 1 HETATM 21 C C21 017 . . . C 2 11.957 -8.666 -6.118 1 31.7 ? C21 017 100 A 1 HETATM 22 O O22 017 . . . C 2 11.842 -9.881 -6.076 1 33.23 ? O22 017 100 A 1 HETATM 23 O O23 017 . . . C 2 12.461 -7.931 -4.977 1 30.1 ? O23 017 100 A 1 HETATM 24 C C24 017 . . . C 2 12.094 -8.417 -3.688 1 31.47 ? C24 017 100 A 1 HETATM 25 C C25 017 . . . C 2 12.438 -7.34 -2.656 1 31.98 ? C25 017 100 A 1 HETATM 26 O O26 017 . . . C 2 11.287 -7.177 -1.811 1 30.05 ? O26 017 100 A 1 HETATM 27 C C27 017 . . . C 2 10.16 -7.875 -2.319 1 31.64 ? C27 017 100 A 1 HETATM 28 O O28 017 . . . C 2 9.212 -6.914 -2.769 1 32.44 ? O28 017 100 A 1 HETATM 29 C C29 017 . . . C 2 8.805 -7.166 -4.12 1 33.07 ? C29 017 100 A 1 HETATM 30 C C30 017 . . . C 2 9.792 -8.17 -4.696 1 32.55 ? C30 017 100 A 1 HETATM 31 C C31 017 . . . C 2 10.61 -8.674 -3.526 1 32.07 ? C31 017 100 A 1 HETATM 32 C C32 017 . . . C 2 11.148 -7.501 -9.469 1 30.84 ? C32 017 100 A 1 HETATM 33 C C33 017 . . . C 2 8.807 -6.996 -8.678 1 33.92 ? C33 017 100 A 1 HETATM 34 C C34 017 . . . C 2 7.557 -7.412 -8.226 1 36.08 ? C34 017 100 A 1 HETATM 35 C C35 017 . . . C 2 7.283 -8.767 -8.057 1 35.2 ? C35 017 100 A 1 HETATM 36 C C36 017 . . . C 2 8.264 -9.708 -8.344 1 33.39 ? C36 017 100 A 1 HETATM 37 C C37 017 . . . C 2 9.511 -9.287 -8.798 1 32.97 ? C37 017 100 A 1 HETATM 38 C C38 017 . . . C 2 9.788 -7.936 -8.971 1 31.78 ? C38 017 100 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 38 #