data_3SOS # _model_server_result.job_id xTw4E37LHdiypBRUGAvA2w _model_server_result.datetime_utc '2024-10-11 09:30:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3sos # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":702}' # _entry.id 3SOS # _exptl.entry_id 3SOS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3SOS _cell.length_a 59.114 _cell.length_b 59.548 _cell.length_c 66.755 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SOS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 A CYS 416 1_555 A SG CYS 45 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? disulf ? disulf2 A SG CYS 127 A CYS 514 1_555 A SG CYS 194 A CYS 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf3 A SG CYS 158 A CYS 545 1_555 A SG CYS 173 A CYS 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf4 A SG CYS 184 A CYS 571 1_555 A SG CYS 212 A CYS 599 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 421 n n C C2 TRS sing 422 n n C C3 TRS sing 423 n n C N TRS sing 424 n n C1 O1 TRS sing 425 n n C1 H11 TRS sing 426 n n C1 H12 TRS sing 427 n n C2 O2 TRS sing 428 n n C2 H21 TRS sing 429 n n C2 H22 TRS sing 430 n n C3 O3 TRS sing 431 n n C3 H31 TRS sing 432 n n C3 H32 TRS sing 433 n n N HN1 TRS sing 434 n n N HN2 TRS sing 435 n n N HN3 TRS sing 436 n n O1 HO1 TRS sing 437 n n O2 HO2 TRS sing 438 n n O3 HO3 TRS sing 439 n n # _atom_sites.entry_id 3SOS _atom_sites.fract_transf_matrix[1][1] 0.016916 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016793 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01498 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT A 1 701 1 CIT CIT . C 3 TRS A 1 702 2 TRS TRS . D 4 O61 A 1 703 1 O61 O61 . E 5 HOH A 1 801 3 HOH HOH . E 5 HOH A 2 802 4 HOH HOH . E 5 HOH A 3 803 5 HOH HOH . E 5 HOH A 4 804 7 HOH HOH . E 5 HOH A 5 805 8 HOH HOH . E 5 HOH A 6 806 9 HOH HOH . E 5 HOH A 7 807 11 HOH HOH . E 5 HOH A 8 808 12 HOH HOH . E 5 HOH A 9 809 13 HOH HOH . E 5 HOH A 10 810 14 HOH HOH . E 5 HOH A 11 811 15 HOH HOH . E 5 HOH A 12 812 16 HOH HOH . E 5 HOH A 13 813 17 HOH HOH . E 5 HOH A 14 814 18 HOH HOH . E 5 HOH A 15 815 20 HOH HOH . E 5 HOH A 16 816 21 HOH HOH . E 5 HOH A 17 817 24 HOH HOH . E 5 HOH A 18 818 25 HOH HOH . E 5 HOH A 19 819 26 HOH HOH . E 5 HOH A 20 820 27 HOH HOH . E 5 HOH A 21 821 28 HOH HOH . E 5 HOH A 22 822 30 HOH HOH . E 5 HOH A 23 823 32 HOH HOH . E 5 HOH A 24 824 35 HOH HOH . E 5 HOH A 25 825 36 HOH HOH . E 5 HOH A 26 826 37 HOH HOH . E 5 HOH A 27 827 40 HOH HOH . E 5 HOH A 28 828 41 HOH HOH . E 5 HOH A 29 829 43 HOH HOH . E 5 HOH A 30 830 44 HOH HOH . E 5 HOH A 31 831 45 HOH HOH . E 5 HOH A 32 832 46 HOH HOH . E 5 HOH A 33 833 47 HOH HOH . E 5 HOH A 34 834 48 HOH HOH . E 5 HOH A 35 835 50 HOH HOH . E 5 HOH A 36 836 63 HOH HOH . E 5 HOH A 37 837 67 HOH HOH . E 5 HOH A 38 838 68 HOH HOH . E 5 HOH A 39 839 71 HOH HOH . E 5 HOH A 40 840 73 HOH HOH . E 5 HOH A 41 841 83 HOH HOH . E 5 HOH A 42 842 87 HOH HOH . E 5 HOH A 43 843 94 HOH HOH . E 5 HOH A 44 844 97 HOH HOH . E 5 HOH A 45 845 109 HOH HOH . E 5 HOH A 46 846 131 HOH HOH . E 5 HOH A 47 847 132 HOH HOH . E 5 HOH A 48 848 138 HOH HOH . E 5 HOH A 49 849 139 HOH HOH . E 5 HOH A 50 850 142 HOH HOH . E 5 HOH A 51 851 143 HOH HOH . E 5 HOH A 52 852 144 HOH HOH . E 5 HOH A 53 853 145 HOH HOH . E 5 HOH A 54 854 146 HOH HOH . E 5 HOH A 55 855 147 HOH HOH . E 5 HOH A 56 856 148 HOH HOH . E 5 HOH A 57 857 149 HOH HOH . E 5 HOH A 58 858 151 HOH HOH . E 5 HOH A 59 859 152 HOH HOH . E 5 HOH A 60 860 153 HOH HOH . E 5 HOH A 61 861 156 HOH HOH . E 5 HOH A 62 862 157 HOH HOH . E 5 HOH A 63 863 162 HOH HOH . E 5 HOH A 64 864 164 HOH HOH . E 5 HOH A 65 865 165 HOH HOH . E 5 HOH A 66 866 166 HOH HOH . E 5 HOH A 67 867 169 HOH HOH . E 5 HOH A 68 868 171 HOH HOH . E 5 HOH A 69 869 174 HOH HOH . E 5 HOH A 70 870 175 HOH HOH . E 5 HOH A 71 871 177 HOH HOH . E 5 HOH A 72 872 178 HOH HOH . E 5 HOH A 73 873 179 HOH HOH . E 5 HOH A 74 874 180 HOH HOH . E 5 HOH A 75 875 181 HOH HOH . E 5 HOH A 76 876 182 HOH HOH . E 5 HOH A 77 877 183 HOH HOH . E 5 HOH A 78 878 184 HOH HOH . E 5 HOH A 79 879 185 HOH HOH . E 5 HOH A 80 880 186 HOH HOH . E 5 HOH A 81 881 187 HOH HOH . E 5 HOH A 82 882 188 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . C 3 -22.927 -8.969 25.573 1 64.06 ? C TRS 702 A 1 HETATM 2 C C1 TRS . . . C 3 -23.139 -9.71 24.255 1 61.91 ? C1 TRS 702 A 1 HETATM 3 C C2 TRS . . . C 3 -23.071 -9.869 26.82 1 66.99 ? C2 TRS 702 A 1 HETATM 4 C C3 TRS . . . C 3 -23.947 -7.841 25.605 1 59.02 ? C3 TRS 702 A 1 HETATM 5 N N TRS . . . C 3 -21.538 -8.395 25.576 1 63.98 ? N TRS 702 A 1 HETATM 6 O O1 TRS . . . C 3 -21.882 -10.205 23.804 1 65.98 ? O1 TRS 702 A 1 HETATM 7 O O2 TRS . . . C 3 -24.262 -9.598 27.594 1 69.39 ? O2 TRS 702 A 1 HETATM 8 O O3 TRS . . . C 3 -25.301 -8.317 25.458 1 52.59 ? O3 TRS 702 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 413 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 8 #