data_3SP1 # _model_server_result.job_id y2hi_SU0Pvr3a2JNmfXLcQ _model_server_result.datetime_utc '2024-12-25 17:21:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3sp1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":481}' # _entry.id 3SP1 # _exptl.entry_id 3SP1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.18 _cell.angle_gamma 90 _cell.entry_id 3SP1 _cell.length_a 62.62 _cell.length_b 49.89 _cell.length_c 179.63 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SP1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 48 A CYS 27 1_555 C ZN ZN . A ZN 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc2 A SG CYS 242 A CYS 221 1_555 C ZN ZN . A ZN 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc3 A NE2 HIS 267 A HIS 246 1_555 C ZN ZN . A ZN 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc4 C ZN ZN . A ZN 481 1_555 H O HOH . A HOH 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc5 B SG CYS 48 B CYS 27 1_555 E ZN ZN . B ZN 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc6 B SG CYS 242 B CYS 221 1_555 E ZN ZN . B ZN 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc7 B NE2 HIS 267 B HIS 246 1_555 E ZN ZN . B ZN 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc8 E ZN ZN . B ZN 481 1_555 I O HOH . B HOH 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3SP1 _atom_sites.fract_transf_matrix[1][1] 0.015969 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000887 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020044 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005576 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 481 481 ZN ZN . D 3 AMP A 1 482 482 AMP AMP . E 2 ZN B 1 481 481 ZN ZN . F 3 AMP B 1 482 482 AMP AMP . G 4 CL B 1 483 483 CL CL . H 5 HOH A 1 483 483 HOH HOH . H 5 HOH A 2 484 484 HOH HOH . H 5 HOH A 3 485 485 HOH HOH . H 5 HOH A 4 486 486 HOH HOH . H 5 HOH A 5 487 487 HOH HOH . H 5 HOH A 6 488 488 HOH HOH . H 5 HOH A 7 489 489 HOH HOH . H 5 HOH A 8 490 490 HOH HOH . H 5 HOH A 9 491 491 HOH HOH . H 5 HOH A 10 492 492 HOH HOH . H 5 HOH A 11 493 493 HOH HOH . H 5 HOH A 12 494 494 HOH HOH . H 5 HOH A 13 495 495 HOH HOH . H 5 HOH A 14 496 496 HOH HOH . H 5 HOH A 15 497 497 HOH HOH . H 5 HOH A 16 498 498 HOH HOH . H 5 HOH A 17 499 499 HOH HOH . H 5 HOH A 18 500 500 HOH HOH . H 5 HOH A 19 501 501 HOH HOH . H 5 HOH A 20 502 502 HOH HOH . H 5 HOH A 21 503 503 HOH HOH . H 5 HOH A 22 504 504 HOH HOH . H 5 HOH A 23 505 505 HOH HOH . H 5 HOH A 24 506 506 HOH HOH . H 5 HOH A 25 507 507 HOH HOH . H 5 HOH A 26 508 508 HOH HOH . H 5 HOH A 27 509 509 HOH HOH . H 5 HOH A 28 510 510 HOH HOH . H 5 HOH A 29 511 511 HOH HOH . H 5 HOH A 30 512 512 HOH HOH . H 5 HOH A 31 513 513 HOH HOH . H 5 HOH A 32 514 514 HOH HOH . H 5 HOH A 33 515 515 HOH HOH . H 5 HOH A 34 516 516 HOH HOH . H 5 HOH A 35 517 517 HOH HOH . H 5 HOH A 36 518 518 HOH HOH . H 5 HOH A 37 519 519 HOH HOH . H 5 HOH A 38 520 520 HOH HOH . H 5 HOH A 39 521 521 HOH HOH . H 5 HOH A 40 522 522 HOH HOH . H 5 HOH A 41 523 523 HOH HOH . H 5 HOH A 42 524 524 HOH HOH . H 5 HOH A 43 525 525 HOH HOH . H 5 HOH A 44 526 526 HOH HOH . H 5 HOH A 45 527 527 HOH HOH . H 5 HOH A 46 528 528 HOH HOH . H 5 HOH A 47 529 529 HOH HOH . H 5 HOH A 48 530 530 HOH HOH . H 5 HOH A 49 531 531 HOH HOH . H 5 HOH A 50 532 532 HOH HOH . H 5 HOH A 51 533 533 HOH HOH . H 5 HOH A 52 534 534 HOH HOH . H 5 HOH A 53 535 535 HOH HOH . H 5 HOH A 54 536 536 HOH HOH . H 5 HOH A 55 537 537 HOH HOH . H 5 HOH A 56 538 538 HOH HOH . H 5 HOH A 57 539 539 HOH HOH . H 5 HOH A 58 540 540 HOH HOH . H 5 HOH A 59 541 541 HOH HOH . H 5 HOH A 60 542 542 HOH HOH . H 5 HOH A 61 543 543 HOH HOH . H 5 HOH A 62 544 544 HOH HOH . H 5 HOH A 63 545 545 HOH HOH . H 5 HOH A 64 546 546 HOH HOH . H 5 HOH A 65 547 547 HOH HOH . H 5 HOH A 66 548 548 HOH HOH . H 5 HOH A 67 549 549 HOH HOH . H 5 HOH A 68 550 550 HOH HOH . H 5 HOH A 69 551 551 HOH HOH . H 5 HOH A 70 552 552 HOH HOH . H 5 HOH A 71 553 553 HOH HOH . H 5 HOH A 72 554 554 HOH HOH . H 5 HOH A 73 555 555 HOH HOH . H 5 HOH A 74 556 556 HOH HOH . H 5 HOH A 75 557 557 HOH HOH . H 5 HOH A 76 558 558 HOH HOH . H 5 HOH A 77 559 559 HOH HOH . H 5 HOH A 78 560 560 HOH HOH . H 5 HOH A 79 561 561 HOH HOH . H 5 HOH A 80 562 562 HOH HOH . H 5 HOH A 81 563 563 HOH HOH . H 5 HOH A 82 564 564 HOH HOH . H 5 HOH A 83 565 565 HOH HOH . I 5 HOH B 1 484 484 HOH HOH . I 5 HOH B 2 485 485 HOH HOH . I 5 HOH B 3 486 486 HOH HOH . I 5 HOH B 4 487 487 HOH HOH . I 5 HOH B 5 488 488 HOH HOH . I 5 HOH B 6 489 489 HOH HOH . I 5 HOH B 7 490 490 HOH HOH . I 5 HOH B 8 491 491 HOH HOH . I 5 HOH B 9 492 492 HOH HOH . I 5 HOH B 10 493 493 HOH HOH . I 5 HOH B 11 494 494 HOH HOH . I 5 HOH B 12 495 495 HOH HOH . I 5 HOH B 13 496 496 HOH HOH . I 5 HOH B 14 497 497 HOH HOH . I 5 HOH B 15 498 498 HOH HOH . I 5 HOH B 16 499 499 HOH HOH . I 5 HOH B 17 500 500 HOH HOH . I 5 HOH B 18 501 501 HOH HOH . I 5 HOH B 19 502 502 HOH HOH . I 5 HOH B 20 503 503 HOH HOH . I 5 HOH B 21 504 504 HOH HOH . I 5 HOH B 22 505 505 HOH HOH . I 5 HOH B 23 506 506 HOH HOH . I 5 HOH B 24 507 507 HOH HOH . I 5 HOH B 25 508 508 HOH HOH . I 5 HOH B 26 509 509 HOH HOH . I 5 HOH B 27 510 510 HOH HOH . I 5 HOH B 28 511 511 HOH HOH . I 5 HOH B 29 512 512 HOH HOH . I 5 HOH B 30 513 513 HOH HOH . I 5 HOH B 31 514 514 HOH HOH . I 5 HOH B 32 515 515 HOH HOH . I 5 HOH B 33 516 516 HOH HOH . I 5 HOH B 34 517 517 HOH HOH . I 5 HOH B 35 518 518 HOH HOH . I 5 HOH B 36 519 519 HOH HOH . I 5 HOH B 37 520 520 HOH HOH . I 5 HOH B 38 521 521 HOH HOH . I 5 HOH B 39 522 522 HOH HOH . I 5 HOH B 40 523 523 HOH HOH . I 5 HOH B 41 524 524 HOH HOH . I 5 HOH B 42 525 525 HOH HOH . I 5 HOH B 43 526 526 HOH HOH . I 5 HOH B 44 527 527 HOH HOH . I 5 HOH B 45 528 528 HOH HOH . I 5 HOH B 46 529 529 HOH HOH . I 5 HOH B 47 530 530 HOH HOH . I 5 HOH B 48 531 531 HOH HOH . I 5 HOH B 49 532 532 HOH HOH . I 5 HOH B 50 533 533 HOH HOH . I 5 HOH B 51 534 534 HOH HOH . I 5 HOH B 52 535 535 HOH HOH . I 5 HOH B 53 536 536 HOH HOH . I 5 HOH B 54 537 537 HOH HOH . I 5 HOH B 55 538 538 HOH HOH . I 5 HOH B 56 539 539 HOH HOH . I 5 HOH B 57 540 540 HOH HOH . I 5 HOH B 58 541 541 HOH HOH . I 5 HOH B 59 542 542 HOH HOH . I 5 HOH B 60 543 543 HOH HOH . I 5 HOH B 61 544 544 HOH HOH . I 5 HOH B 62 545 545 HOH HOH . I 5 HOH B 63 546 546 HOH HOH . I 5 HOH B 64 547 547 HOH HOH . I 5 HOH B 65 548 548 HOH HOH . I 5 HOH B 66 549 549 HOH HOH . I 5 HOH B 67 550 550 HOH HOH . I 5 HOH B 68 551 551 HOH HOH . I 5 HOH B 69 552 552 HOH HOH . I 5 HOH B 70 553 553 HOH HOH . I 5 HOH B 71 554 554 HOH HOH . I 5 HOH B 72 555 555 HOH HOH . I 5 HOH B 73 556 556 HOH HOH . I 5 HOH B 74 557 557 HOH HOH . I 5 HOH B 75 558 558 HOH HOH . I 5 HOH B 76 559 559 HOH HOH . I 5 HOH B 77 560 560 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x -15.707 _atom_site.Cartn_y 25.199 _atom_site.Cartn_z -21.543 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.76 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 481 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #