data_3SPG # _model_server_result.job_id hVzAIAWPg60mOADPPmqZEg _model_server_result.datetime_utc '2024-11-27 15:12:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3spg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 3SPG # _exptl.entry_id 3SPG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3SPG _cell.length_a 81.865 _cell.length_b 81.865 _cell.length_c 183.102 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SPG _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_445 -x-1,-y-1,z -1 0 0 0 -1 0 0 0 1 -81.865 -81.865 0 3 'crystal symmetry operation' 3_455 -y-1,x,z 0 -1 0 1 0 0 0 0 1 -81.865 0 0 4 'crystal symmetry operation' 4_545 y,-x-1,z 0 1 0 -1 0 0 0 0 1 0 -81.865 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 88 A CYS 123 1_555 A SG CYS 120 A CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc1 I O HOH . A HOH 27 1_555 F K K . A K 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.181 ? metalc ? metalc2 I O HOH . A HOH 30 1_555 F K K . A K 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.294 ? metalc ? metalc3 A O THR 108 A THR 143 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc4 A OG1 THR 108 A THR 143 1_555 E K K . A K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc5 A O THR 108 A THR 143 1_555 E K K . A K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? metalc ? metalc6 A O ILE 109 A ILE 144 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.793 ? metalc ? metalc7 A O ILE 109 A ILE 144 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? metalc ? metalc8 A O GLY 110 A GLY 145 1_555 B K K . A K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.79 ? metalc ? metalc9 A O GLY 110 A GLY 145 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? metalc ? metalc10 A O TYR 111 A TYR 146 1_555 B K K . A K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.773 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3SPG _atom_sites.fract_transf_matrix[1][1] 0.012215 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012215 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005461 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K A 1 501 501 K K . C 2 K A 1 502 502 K K . D 2 K A 1 503 503 K K . E 2 K A 1 504 504 K K . F 2 K A 1 506 506 K K . G 2 K A 1 510 510 K K . H 3 PIO A 1 400 400 PIO PIO . I 4 HOH A 1 1 1 HOH HOH . I 4 HOH A 2 2 2 HOH HOH . I 4 HOH A 3 3 3 HOH HOH . I 4 HOH A 4 4 4 HOH HOH . I 4 HOH A 5 5 5 HOH HOH . I 4 HOH A 6 6 6 HOH HOH . I 4 HOH A 7 7 7 HOH HOH . I 4 HOH A 8 8 8 HOH HOH . I 4 HOH A 9 9 9 HOH HOH . I 4 HOH A 10 10 10 HOH HOH . I 4 HOH A 11 11 11 HOH HOH . I 4 HOH A 12 12 12 HOH HOH . I 4 HOH A 13 13 13 HOH HOH . I 4 HOH A 14 14 14 HOH HOH . I 4 HOH A 15 15 15 HOH HOH . I 4 HOH A 16 16 16 HOH HOH . I 4 HOH A 17 17 17 HOH HOH . I 4 HOH A 18 18 18 HOH HOH . I 4 HOH A 19 19 19 HOH HOH . I 4 HOH A 20 20 20 HOH HOH . I 4 HOH A 21 21 21 HOH HOH . I 4 HOH A 22 22 22 HOH HOH . I 4 HOH A 23 23 23 HOH HOH . I 4 HOH A 24 24 24 HOH HOH . I 4 HOH A 25 25 25 HOH HOH . I 4 HOH A 26 26 26 HOH HOH . I 4 HOH A 27 27 27 HOH HOH . I 4 HOH A 28 28 28 HOH HOH . I 4 HOH A 29 29 29 HOH HOH . I 4 HOH A 30 30 30 HOH HOH . I 4 HOH A 31 31 31 HOH HOH . I 4 HOH A 32 32 32 HOH HOH . I 4 HOH A 33 33 33 HOH HOH . I 4 HOH A 34 34 34 HOH HOH . I 4 HOH A 35 35 35 HOH HOH . I 4 HOH A 36 379 37 HOH HOH . I 4 HOH A 37 380 38 HOH HOH . I 4 HOH A 38 381 39 HOH HOH . I 4 HOH A 39 382 40 HOH HOH . I 4 HOH A 40 383 41 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -40.932 _atom_site.Cartn_y -40.932 _atom_site.Cartn_z 34.719 _atom_site.occupancy 0.25 _atom_site.B_iso_or_equiv 70.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 503 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #