data_3SPR # _model_server_result.job_id '_G-zRKa9B4ZDb6tbzIRwRw' _model_server_result.datetime_utc '2024-12-01 15:11:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3spr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":235}' # _entry.id 3SPR # _exptl.entry_id 3SPR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3SPR _cell.length_a 79.9 _cell.length_b 109.2 _cell.length_c 61.31 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SPR _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C LYS 4 P LYS 372 1_555 B N SEP 5 P SEP 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale2 B C SEP 5 P SEP 373 1_555 B N VAL 6 P VAL 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? metalc ? metalc1 A OE1 GLU 40 A GLU 35 1_555 F MG MG . A MG 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc2 A OE2 GLU 40 A GLU 35 1_555 F MG MG . A MG 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc3 A O GLU 115 A GLU 110 1_555 F MG MG . A MG 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc4 A O GLU 166 A GLU 161 1_555 E MG MG . A MG 234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc5 E MG MG . A MG 234 1_555 H O HOH . A HOH 240 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc6 E MG MG . A MG 234 1_555 H O HOH . A HOH 352 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? metalc ? metalc7 E MG MG . A MG 234 1_555 H O HOH . A HOH 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.828 ? metalc ? metalc8 E MG MG . A MG 234 1_555 H O HOH . A HOH 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc9 F MG MG . A MG 235 1_555 H O HOH . A HOH 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? metalc ? metalc10 F MG MG . A MG 235 1_555 H O HOH . A HOH 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc11 F MG MG . A MG 235 1_555 H O HOH . A HOH 385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3SPR _atom_sites.fract_transf_matrix[1][1] 0.012516 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009158 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016311 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FC7 A 1 232 1 FC7 FC7 . D 4 CL A 1 233 1 CL CL . E 5 MG A 1 234 2 MG MG . F 5 MG A 1 235 3 MG MG . G 5 MG A 1 236 4 MG MG . H 6 HOH A 1 237 1 HOH HOH . H 6 HOH A 2 238 2 HOH HOH . H 6 HOH A 3 239 3 HOH HOH . H 6 HOH A 4 240 4 HOH HOH . H 6 HOH A 5 241 5 HOH HOH . H 6 HOH A 6 242 6 HOH HOH . H 6 HOH A 7 243 7 HOH HOH . H 6 HOH A 8 244 8 HOH HOH . H 6 HOH A 9 245 9 HOH HOH . H 6 HOH A 10 246 10 HOH HOH . H 6 HOH A 11 247 11 HOH HOH . H 6 HOH A 12 248 12 HOH HOH . H 6 HOH A 13 249 13 HOH HOH . H 6 HOH A 14 250 14 HOH HOH . H 6 HOH A 15 251 15 HOH HOH . H 6 HOH A 16 252 16 HOH HOH . H 6 HOH A 17 253 17 HOH HOH . H 6 HOH A 18 254 18 HOH HOH . H 6 HOH A 19 255 19 HOH HOH . H 6 HOH A 20 256 20 HOH HOH . H 6 HOH A 21 257 21 HOH HOH . H 6 HOH A 22 258 22 HOH HOH . H 6 HOH A 23 259 23 HOH HOH . H 6 HOH A 24 260 25 HOH HOH . H 6 HOH A 25 261 26 HOH HOH . H 6 HOH A 26 262 27 HOH HOH . H 6 HOH A 27 263 29 HOH HOH . H 6 HOH A 28 264 30 HOH HOH . H 6 HOH A 29 265 31 HOH HOH . H 6 HOH A 30 266 32 HOH HOH . H 6 HOH A 31 267 33 HOH HOH . H 6 HOH A 32 268 34 HOH HOH . H 6 HOH A 33 269 35 HOH HOH . H 6 HOH A 34 270 36 HOH HOH . H 6 HOH A 35 271 37 HOH HOH . H 6 HOH A 36 272 38 HOH HOH . H 6 HOH A 37 273 39 HOH HOH . H 6 HOH A 38 274 40 HOH HOH . H 6 HOH A 39 275 41 HOH HOH . H 6 HOH A 40 276 42 HOH HOH . H 6 HOH A 41 277 44 HOH HOH . H 6 HOH A 42 278 45 HOH HOH . H 6 HOH A 43 279 46 HOH HOH . H 6 HOH A 44 280 47 HOH HOH . H 6 HOH A 45 281 48 HOH HOH . H 6 HOH A 46 282 49 HOH HOH . H 6 HOH A 47 283 50 HOH HOH . H 6 HOH A 48 284 51 HOH HOH . H 6 HOH A 49 285 52 HOH HOH . H 6 HOH A 50 286 53 HOH HOH . H 6 HOH A 51 287 54 HOH HOH . H 6 HOH A 52 288 55 HOH HOH . H 6 HOH A 53 289 56 HOH HOH . H 6 HOH A 54 290 57 HOH HOH . H 6 HOH A 55 291 58 HOH HOH . H 6 HOH A 56 292 59 HOH HOH . H 6 HOH A 57 293 60 HOH HOH . H 6 HOH A 58 294 61 HOH HOH . H 6 HOH A 59 295 62 HOH HOH . H 6 HOH A 60 296 63 HOH HOH . H 6 HOH A 61 297 65 HOH HOH . H 6 HOH A 62 298 66 HOH HOH . H 6 HOH A 63 299 67 HOH HOH . H 6 HOH A 64 300 68 HOH HOH . H 6 HOH A 65 301 69 HOH HOH . H 6 HOH A 66 302 70 HOH HOH . H 6 HOH A 67 303 72 HOH HOH . H 6 HOH A 68 304 73 HOH HOH . H 6 HOH A 69 305 74 HOH HOH . H 6 HOH A 70 306 75 HOH HOH . H 6 HOH A 71 307 76 HOH HOH . H 6 HOH A 72 308 77 HOH HOH . H 6 HOH A 73 309 78 HOH HOH . H 6 HOH A 74 310 79 HOH HOH . H 6 HOH A 75 311 80 HOH HOH . H 6 HOH A 76 312 81 HOH HOH . H 6 HOH A 77 313 82 HOH HOH . H 6 HOH A 78 314 84 HOH HOH . H 6 HOH A 79 315 85 HOH HOH . H 6 HOH A 80 316 86 HOH HOH . H 6 HOH A 81 317 87 HOH HOH . H 6 HOH A 82 318 88 HOH HOH . H 6 HOH A 83 319 89 HOH HOH . H 6 HOH A 84 320 90 HOH HOH . H 6 HOH A 85 321 91 HOH HOH . H 6 HOH A 86 322 92 HOH HOH . H 6 HOH A 87 323 93 HOH HOH . H 6 HOH A 88 324 94 HOH HOH . H 6 HOH A 89 325 95 HOH HOH . H 6 HOH A 90 326 96 HOH HOH . H 6 HOH A 91 327 97 HOH HOH . H 6 HOH A 92 328 98 HOH HOH . H 6 HOH A 93 329 99 HOH HOH . H 6 HOH A 94 330 100 HOH HOH . H 6 HOH A 95 331 101 HOH HOH . H 6 HOH A 96 332 102 HOH HOH . H 6 HOH A 97 333 103 HOH HOH . H 6 HOH A 98 334 104 HOH HOH . H 6 HOH A 99 335 105 HOH HOH . H 6 HOH A 100 336 106 HOH HOH . H 6 HOH A 101 337 107 HOH HOH . H 6 HOH A 102 338 109 HOH HOH . H 6 HOH A 103 339 110 HOH HOH . H 6 HOH A 104 340 111 HOH HOH . H 6 HOH A 105 341 112 HOH HOH . H 6 HOH A 106 342 113 HOH HOH . H 6 HOH A 107 343 114 HOH HOH . H 6 HOH A 108 344 115 HOH HOH . H 6 HOH A 109 345 116 HOH HOH . H 6 HOH A 110 346 117 HOH HOH . H 6 HOH A 111 347 118 HOH HOH . H 6 HOH A 112 348 119 HOH HOH . H 6 HOH A 113 349 120 HOH HOH . H 6 HOH A 114 350 121 HOH HOH . H 6 HOH A 115 351 122 HOH HOH . H 6 HOH A 116 352 123 HOH HOH . H 6 HOH A 117 353 124 HOH HOH . H 6 HOH A 118 354 125 HOH HOH . H 6 HOH A 119 355 126 HOH HOH . H 6 HOH A 120 356 127 HOH HOH . H 6 HOH A 121 357 128 HOH HOH . H 6 HOH A 122 358 129 HOH HOH . H 6 HOH A 123 359 130 HOH HOH . H 6 HOH A 124 360 131 HOH HOH . H 6 HOH A 125 361 132 HOH HOH . H 6 HOH A 126 362 133 HOH HOH . H 6 HOH A 127 363 134 HOH HOH . H 6 HOH A 128 364 135 HOH HOH . H 6 HOH A 129 365 136 HOH HOH . H 6 HOH A 130 366 137 HOH HOH . H 6 HOH A 131 367 138 HOH HOH . H 6 HOH A 132 368 139 HOH HOH . H 6 HOH A 133 369 140 HOH HOH . H 6 HOH A 134 370 141 HOH HOH . H 6 HOH A 135 371 142 HOH HOH . H 6 HOH A 136 372 143 HOH HOH . H 6 HOH A 137 373 144 HOH HOH . H 6 HOH A 138 374 145 HOH HOH . H 6 HOH A 139 375 146 HOH HOH . H 6 HOH A 140 376 147 HOH HOH . H 6 HOH A 141 377 148 HOH HOH . H 6 HOH A 142 378 149 HOH HOH . H 6 HOH A 143 379 151 HOH HOH . H 6 HOH A 144 380 152 HOH HOH . H 6 HOH A 145 381 153 HOH HOH . H 6 HOH A 146 382 154 HOH HOH . H 6 HOH A 147 383 155 HOH HOH . H 6 HOH A 148 384 156 HOH HOH . H 6 HOH A 149 385 157 HOH HOH . H 6 HOH A 150 386 158 HOH HOH . H 6 HOH A 151 387 159 HOH HOH . H 6 HOH A 152 388 160 HOH HOH . H 6 HOH A 153 389 161 HOH HOH . H 6 HOH A 154 390 162 HOH HOH . H 6 HOH A 155 391 163 HOH HOH . H 6 HOH A 156 392 164 HOH HOH . H 6 HOH A 157 393 165 HOH HOH . H 6 HOH A 158 394 166 HOH HOH . H 6 HOH A 159 395 167 HOH HOH . H 6 HOH A 160 396 168 HOH HOH . H 6 HOH A 161 397 169 HOH HOH . H 6 HOH A 162 398 170 HOH HOH . H 6 HOH A 163 399 171 HOH HOH . I 6 HOH P 1 24 24 HOH HOH . I 6 HOH P 2 28 28 HOH HOH . I 6 HOH P 3 43 43 HOH HOH . I 6 HOH P 4 64 64 HOH HOH . I 6 HOH P 5 71 71 HOH HOH . I 6 HOH P 6 83 83 HOH HOH . I 6 HOH P 7 108 108 HOH HOH . I 6 HOH P 8 150 150 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 5 _atom_site.Cartn_x 32.802 _atom_site.Cartn_y -32.369 _atom_site.Cartn_z 2.368 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 14.88 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 235 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #