data_3SPX # _model_server_result.job_id 0NMwwmpf6OtUldffnh7E_Q _model_server_result.datetime_utc '2025-02-27 02:26:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3spx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":337}' # _entry.id 3SPX # _exptl.entry_id 3SPX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3SPX _cell.length_a 115.266 _cell.length_b 61.974 _cell.length_c 43.427 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SPX _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_755 -x+2,-y,z -1 0 0 0 -1 0 0 0 1 230.532 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 50 A VAL 50 1_555 A N LLP 51 A LLP 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale2 A C LLP 51 A LLP 51 1_555 A N ASP 52 A ASP 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? metalc ? metalc1 A OE1 GLU 44 A GLU 44 1_555 C NA NA . A NA 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.928 ? metalc ? metalc2 A OE2 GLU 44 A GLU 44 1_555 C NA NA . A NA 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.963 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3SPX _atom_sites.fract_transf_matrix[1][1] 0.008676 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016136 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023027 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 335 197 CL CL . C 3 NA A 1 336 198 NA NA . D 4 PEG A 1 337 204 PEG PEG . E 5 HOH A 1 338 11 HOH HOH . E 5 HOH A 2 339 12 HOH HOH . E 5 HOH A 3 340 13 HOH HOH . E 5 HOH A 4 341 14 HOH HOH . E 5 HOH A 5 342 15 HOH HOH . E 5 HOH A 6 343 16 HOH HOH . E 5 HOH A 7 344 17 HOH HOH . E 5 HOH A 8 345 18 HOH HOH . E 5 HOH A 9 346 19 HOH HOH . E 5 HOH A 10 347 20 HOH HOH . E 5 HOH A 11 348 21 HOH HOH . E 5 HOH A 12 349 22 HOH HOH . E 5 HOH A 13 350 23 HOH HOH . E 5 HOH A 14 351 24 HOH HOH . E 5 HOH A 15 352 25 HOH HOH . E 5 HOH A 16 353 26 HOH HOH . E 5 HOH A 17 354 27 HOH HOH . E 5 HOH A 18 355 28 HOH HOH . E 5 HOH A 19 356 29 HOH HOH . E 5 HOH A 20 357 30 HOH HOH . E 5 HOH A 21 358 31 HOH HOH . E 5 HOH A 22 359 32 HOH HOH . E 5 HOH A 23 360 33 HOH HOH . E 5 HOH A 24 361 34 HOH HOH . E 5 HOH A 25 362 35 HOH HOH . E 5 HOH A 26 363 36 HOH HOH . E 5 HOH A 27 364 37 HOH HOH . E 5 HOH A 28 365 38 HOH HOH . E 5 HOH A 29 366 39 HOH HOH . E 5 HOH A 30 367 40 HOH HOH . E 5 HOH A 31 368 41 HOH HOH . E 5 HOH A 32 369 42 HOH HOH . E 5 HOH A 33 370 43 HOH HOH . E 5 HOH A 34 371 44 HOH HOH . E 5 HOH A 35 372 45 HOH HOH . E 5 HOH A 36 373 46 HOH HOH . E 5 HOH A 37 374 47 HOH HOH . E 5 HOH A 38 375 48 HOH HOH . E 5 HOH A 39 376 49 HOH HOH . E 5 HOH A 40 377 50 HOH HOH . E 5 HOH A 41 378 51 HOH HOH . E 5 HOH A 42 379 52 HOH HOH . E 5 HOH A 43 380 53 HOH HOH . E 5 HOH A 44 381 54 HOH HOH . E 5 HOH A 45 382 55 HOH HOH . E 5 HOH A 46 383 56 HOH HOH . E 5 HOH A 47 384 57 HOH HOH . E 5 HOH A 48 385 58 HOH HOH . E 5 HOH A 49 386 59 HOH HOH . E 5 HOH A 50 387 60 HOH HOH . E 5 HOH A 51 388 61 HOH HOH . E 5 HOH A 52 389 62 HOH HOH . E 5 HOH A 53 390 63 HOH HOH . E 5 HOH A 54 391 64 HOH HOH . E 5 HOH A 55 392 65 HOH HOH . E 5 HOH A 56 393 66 HOH HOH . E 5 HOH A 57 394 67 HOH HOH . E 5 HOH A 58 395 68 HOH HOH . E 5 HOH A 59 396 69 HOH HOH . E 5 HOH A 60 397 70 HOH HOH . E 5 HOH A 61 398 71 HOH HOH . E 5 HOH A 62 399 72 HOH HOH . E 5 HOH A 63 400 73 HOH HOH . E 5 HOH A 64 401 74 HOH HOH . E 5 HOH A 65 402 75 HOH HOH . E 5 HOH A 66 403 76 HOH HOH . E 5 HOH A 67 404 77 HOH HOH . E 5 HOH A 68 405 78 HOH HOH . E 5 HOH A 69 406 79 HOH HOH . E 5 HOH A 70 407 80 HOH HOH . E 5 HOH A 71 408 81 HOH HOH . E 5 HOH A 72 409 82 HOH HOH . E 5 HOH A 73 410 83 HOH HOH . E 5 HOH A 74 411 84 HOH HOH . E 5 HOH A 75 412 85 HOH HOH . E 5 HOH A 76 413 86 HOH HOH . E 5 HOH A 77 414 87 HOH HOH . E 5 HOH A 78 415 88 HOH HOH . E 5 HOH A 79 416 89 HOH HOH . E 5 HOH A 80 417 90 HOH HOH . E 5 HOH A 81 418 91 HOH HOH . E 5 HOH A 82 419 92 HOH HOH . E 5 HOH A 83 420 93 HOH HOH . E 5 HOH A 84 421 94 HOH HOH . E 5 HOH A 85 422 95 HOH HOH . E 5 HOH A 86 423 96 HOH HOH . E 5 HOH A 87 424 97 HOH HOH . E 5 HOH A 88 425 98 HOH HOH . E 5 HOH A 89 426 99 HOH HOH . E 5 HOH A 90 427 100 HOH HOH . E 5 HOH A 91 428 101 HOH HOH . E 5 HOH A 92 429 102 HOH HOH . E 5 HOH A 93 430 103 HOH HOH . E 5 HOH A 94 431 104 HOH HOH . E 5 HOH A 95 432 105 HOH HOH . E 5 HOH A 96 433 106 HOH HOH . E 5 HOH A 97 434 107 HOH HOH . E 5 HOH A 98 435 108 HOH HOH . E 5 HOH A 99 436 109 HOH HOH . E 5 HOH A 100 437 110 HOH HOH . E 5 HOH A 101 438 111 HOH HOH . E 5 HOH A 102 439 112 HOH HOH . E 5 HOH A 103 440 113 HOH HOH . E 5 HOH A 104 441 114 HOH HOH . E 5 HOH A 105 442 115 HOH HOH . E 5 HOH A 106 443 116 HOH HOH . E 5 HOH A 107 444 117 HOH HOH . E 5 HOH A 108 445 118 HOH HOH . E 5 HOH A 109 446 119 HOH HOH . E 5 HOH A 110 447 120 HOH HOH . E 5 HOH A 111 448 121 HOH HOH . E 5 HOH A 112 449 122 HOH HOH . E 5 HOH A 113 450 123 HOH HOH . E 5 HOH A 114 451 124 HOH HOH . E 5 HOH A 115 452 125 HOH HOH . E 5 HOH A 116 453 126 HOH HOH . E 5 HOH A 117 454 127 HOH HOH . E 5 HOH A 118 455 128 HOH HOH . E 5 HOH A 119 456 129 HOH HOH . E 5 HOH A 120 457 130 HOH HOH . E 5 HOH A 121 458 131 HOH HOH . E 5 HOH A 122 459 132 HOH HOH . E 5 HOH A 123 460 133 HOH HOH . E 5 HOH A 124 461 134 HOH HOH . E 5 HOH A 125 462 135 HOH HOH . E 5 HOH A 126 463 136 HOH HOH . E 5 HOH A 127 464 137 HOH HOH . E 5 HOH A 128 465 138 HOH HOH . E 5 HOH A 129 466 139 HOH HOH . E 5 HOH A 130 467 140 HOH HOH . E 5 HOH A 131 468 141 HOH HOH . E 5 HOH A 132 469 142 HOH HOH . E 5 HOH A 133 470 143 HOH HOH . E 5 HOH A 134 471 144 HOH HOH . E 5 HOH A 135 472 145 HOH HOH . E 5 HOH A 136 473 146 HOH HOH . E 5 HOH A 137 474 147 HOH HOH . E 5 HOH A 138 475 148 HOH HOH . E 5 HOH A 139 476 149 HOH HOH . E 5 HOH A 140 477 150 HOH HOH . E 5 HOH A 141 478 151 HOH HOH . E 5 HOH A 142 479 152 HOH HOH . E 5 HOH A 143 480 153 HOH HOH . E 5 HOH A 144 481 154 HOH HOH . E 5 HOH A 145 482 155 HOH HOH . E 5 HOH A 146 483 156 HOH HOH . E 5 HOH A 147 484 157 HOH HOH . E 5 HOH A 148 485 158 HOH HOH . E 5 HOH A 149 486 159 HOH HOH . E 5 HOH A 150 487 160 HOH HOH . E 5 HOH A 151 488 161 HOH HOH . E 5 HOH A 152 489 162 HOH HOH . E 5 HOH A 153 490 163 HOH HOH . E 5 HOH A 154 491 164 HOH HOH . E 5 HOH A 155 492 165 HOH HOH . E 5 HOH A 156 493 166 HOH HOH . E 5 HOH A 157 494 167 HOH HOH . E 5 HOH A 158 495 168 HOH HOH . E 5 HOH A 159 496 169 HOH HOH . E 5 HOH A 160 497 170 HOH HOH . E 5 HOH A 161 498 171 HOH HOH . E 5 HOH A 162 499 172 HOH HOH . E 5 HOH A 163 500 173 HOH HOH . E 5 HOH A 164 501 174 HOH HOH . E 5 HOH A 165 502 175 HOH HOH . E 5 HOH A 166 503 176 HOH HOH . E 5 HOH A 167 504 177 HOH HOH . E 5 HOH A 168 505 178 HOH HOH . E 5 HOH A 169 506 179 HOH HOH . E 5 HOH A 170 507 180 HOH HOH . E 5 HOH A 171 508 181 HOH HOH . E 5 HOH A 172 509 182 HOH HOH . E 5 HOH A 173 510 183 HOH HOH . E 5 HOH A 174 511 184 HOH HOH . E 5 HOH A 175 512 185 HOH HOH . E 5 HOH A 176 513 186 HOH HOH . E 5 HOH A 177 514 187 HOH HOH . E 5 HOH A 178 515 188 HOH HOH . E 5 HOH A 179 516 189 HOH HOH . E 5 HOH A 180 517 190 HOH HOH . E 5 HOH A 181 518 191 HOH HOH . E 5 HOH A 182 519 192 HOH HOH . E 5 HOH A 183 520 193 HOH HOH . E 5 HOH A 184 521 194 HOH HOH . E 5 HOH A 185 522 195 HOH HOH . E 5 HOH A 186 523 196 HOH HOH . E 5 HOH A 187 524 1 HOH HOH . E 5 HOH A 188 525 2 HOH HOH . E 5 HOH A 189 526 3 HOH HOH . E 5 HOH A 190 527 4 HOH HOH . E 5 HOH A 191 528 5 HOH HOH . E 5 HOH A 192 529 6 HOH HOH . E 5 HOH A 193 530 7 HOH HOH . E 5 HOH A 194 531 8 HOH HOH . E 5 HOH A 195 532 9 HOH HOH . E 5 HOH A 196 533 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 4 123.459 -18.591 16.345 1 46.4 ? C1 PEG 337 A 1 HETATM 2 O O1 PEG . . . D 4 122.636 -18.688 17.537 1 42.28 ? O1 PEG 337 A 1 HETATM 3 C C2 PEG . . . D 4 123.101 -19.43 15.098 1 46.73 ? C2 PEG 337 A 1 HETATM 4 O O2 PEG . . . D 4 124.345 -19.946 14.521 1 46.81 ? O2 PEG 337 A 1 HETATM 5 C C3 PEG . . . D 4 124.158 -21.071 13.622 1 45.59 ? C3 PEG 337 A 1 HETATM 6 C C4 PEG . . . D 4 125.434 -21.877 13.267 1 44.51 ? C4 PEG 337 A 1 HETATM 7 O O4 PEG . . . D 4 126.308 -22.243 14.368 1 45.41 ? O4 PEG 337 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 87 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 1160 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 7 #