data_3SPZ # _model_server_result.job_id BAJGAP236Yt3vk3uP9Kk1A _model_server_result.datetime_utc '2024-11-15 22:01:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3spz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":904}' # _entry.id 3SPZ # _exptl.entry_id 3SPZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 466.169 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]uridine" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3SPZ _cell.length_a 78.168 _cell.length_b 119.064 _cell.length_c 130.208 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SPZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 116 A GLU 116 1_555 H CA CA . A CA 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? metalc ? metalc2 A OE1 GLU 116 A GLU 116 1_555 H CA CA . A CA 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.804 ? metalc ? metalc3 A OD2 ASP 411 A ASP 411 1_555 E CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc4 A OD1 ASP 411 A ASP 411 1_555 E CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.091 ? metalc ? metalc5 A OD2 ASP 411 A ASP 411 1_555 F CA CA . A CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.808 ? metalc ? metalc6 A O LEU 412 A LEU 412 1_555 E CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc7 A O ASN 505 A ASN 505 1_555 G CA CA . A CA 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc8 A OD1 ASN 507 A ASN 507 1_555 G CA CA . A CA 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc9 A O LYS 531 A LYS 531 1_555 G CA CA . A CA 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc10 A OD1 ASP 623 A ASP 623 1_555 E CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc11 A OD2 ASP 623 A ASP 623 1_555 F CA CA . A CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.195 ? metalc ? metalc12 D O1G UPC . A UPC 904 1_555 E CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc13 D O2B UPC . A UPC 904 1_555 E CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc14 D O2A UPC . A UPC 904 1_555 E CA CA . A CA 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? metalc ? metalc15 D O2A UPC . A UPC 904 1_555 F CA CA . A CA 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.827 ? metalc ? metalc16 F CA CA . A CA 906 1_555 C O3' DC 13 P DC 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.962 ? metalc ? metalc17 G CA CA . A CA 907 1_555 I O HOH . A HOH 920 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc18 G CA CA . A CA 907 1_555 I O HOH . A HOH 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? hydrog WATSON-CRICK hydrog1 B N1 DG 3 T DG 5 1_555 C N3 DC 13 P DC 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N2 DG 3 T DG 5 1_555 C O2 DC 13 P DC 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B O6 DG 3 T DG 5 1_555 C N4 DC 13 P DC 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N3 DT 4 T DT 6 1_555 C N1 DA 12 P DA 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B O4 DT 4 T DT 6 1_555 C N6 DA 12 P DA 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B N1 DA 5 T DA 7 1_555 C N3 DT 11 P DT 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B N6 DA 5 T DA 7 1_555 C O4 DT 11 P DT 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B N1 DA 6 T DA 8 1_555 C N3 DT 10 P DT 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B N6 DA 6 T DA 8 1_555 C O4 DT 10 P DT 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B N1 DG 7 T DG 9 1_555 C N3 DC 9 P DC 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B N2 DG 7 T DG 9 1_555 C O2 DC 9 P DC 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B O6 DG 7 T DG 9 1_555 C N4 DC 9 P DC 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B N3 DC 8 T DC 10 1_555 C N1 DG 8 P DG 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B N4 DC 8 T DC 10 1_555 C O6 DG 8 P DG 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B O2 DC 8 T DC 10 1_555 C N2 DG 8 P DG 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B N1 DA 9 T DA 11 1_555 C N3 DT 7 P DT 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B N6 DA 9 T DA 11 1_555 C O4 DT 7 P DT 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B N1 DG 10 T DG 12 1_555 C N3 DC 6 P DC 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B N2 DG 10 T DG 12 1_555 C O2 DC 6 P DC 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B O6 DG 10 T DG 12 1_555 C N4 DC 6 P DC 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 B N3 DT 11 T DT 13 1_555 C N1 DA 5 P DA 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 B O4 DT 11 T DT 13 1_555 C N6 DA 5 P DA 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 B N3 DC 12 T DC 14 1_555 C N1 DG 4 P DG 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 B N4 DC 12 T DC 14 1_555 C O6 DG 4 P DG 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 B O2 DC 12 T DC 14 1_555 C N2 DG 4 P DG 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 B N3 DC 13 T DC 15 1_555 C N1 DG 3 P DG 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 B N4 DC 13 T DC 15 1_555 C O6 DG 3 P DG 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 B O2 DC 13 T DC 15 1_555 C N2 DG 3 P DG 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 B N1 DG 14 T DG 16 1_555 C N3 DC 2 P DC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 B N2 DG 14 T DG 16 1_555 C O2 DC 2 P DC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 B O6 DG 14 T DG 16 1_555 C N4 DC 2 P DC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 B N3 DC 15 T DC 17 1_555 C N1 DG 1 P DG 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog33 B N4 DC 15 T DC 17 1_555 C O6 DG 1 P DG 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog34 B O2 DC 15 T DC 17 1_555 C N2 DG 1 P DG 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C10 H17 N2 O13 P3' _chem_comp.formula_weight 466.169 _chem_comp.id UPC _chem_comp.mon_nstd_flag . _chem_comp.name "2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]uridine" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1' N1 UPC sing 507 n n N1 C6 UPC sing 508 n n N1 C2 UPC sing 509 n n O2 C2 UPC doub 510 n n C2 N3 UPC sing 511 n n N3 C4 UPC sing 512 n n C5 C4 UPC sing 513 n n C4 O4 UPC doub 514 n n C6 C5 UPC doub 515 n n C5 H5 UPC sing 516 n n C6 H6 UPC sing 517 n n O2A PA UPC doub 518 n n PA C3A UPC sing 519 n n PA O5' UPC sing 520 n n PA O1A UPC sing 521 n n O2B PB UPC doub 522 n n O3B PB UPC sing 523 n n PB O1B UPC sing 524 n n PB C3A UPC sing 525 n n O2G PG UPC doub 526 n n O1G PG UPC sing 527 n n PG O3B UPC sing 528 n n PG O3G UPC sing 529 n n O4' C1' UPC sing 530 n n C2' C1' UPC sing 531 n n C1' H1' UPC sing 532 n n O1A HO1A UPC sing 533 n n O1B HO1B UPC sing 534 n n O1G HO1G UPC sing 535 n n C3' C2' UPC sing 536 n n C2' H2' UPC sing 537 n n C2' "H2'A" UPC sing 538 n n O3' C3' UPC sing 539 n n C4' C3' UPC sing 540 n n C3' H3' UPC sing 541 n n O3' HO3' UPC sing 542 n n C3A H3A UPC sing 543 n n C3A H3AA UPC sing 544 n n O3G HO3G UPC sing 545 n n C5' C4' UPC sing 546 n n C4' O4' UPC sing 547 n n C4' H4' UPC sing 548 n n C5' O5' UPC sing 549 n n C5' H5' UPC sing 550 n n C5' "H5'A" UPC sing 551 n n N3 HN3 UPC sing 552 n n # _atom_sites.entry_id 3SPZ _atom_sites.fract_transf_matrix[1][1] 0.012793 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008399 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00768 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 UPC A 1 904 1 UPC UPC . E 5 CA A 1 905 1 CA CA . F 5 CA A 1 906 2 CA CA . G 5 CA A 1 907 3 CA CA . H 5 CA A 1 908 4 CA CA . I 6 HOH A 1 909 1 HOH HOH . I 6 HOH A 2 910 2 HOH HOH . I 6 HOH A 3 911 3 HOH HOH . I 6 HOH A 4 912 4 HOH HOH . I 6 HOH A 5 913 5 HOH HOH . I 6 HOH A 6 914 6 HOH HOH . I 6 HOH A 7 915 7 HOH HOH . I 6 HOH A 8 916 8 HOH HOH . I 6 HOH A 9 917 9 HOH HOH . I 6 HOH A 10 918 10 HOH HOH . I 6 HOH A 11 919 11 HOH HOH . I 6 HOH A 12 920 12 HOH HOH . I 6 HOH A 13 921 13 HOH HOH . I 6 HOH A 14 922 14 HOH HOH . I 6 HOH A 15 923 15 HOH HOH . I 6 HOH A 16 924 18 HOH HOH . I 6 HOH A 17 925 19 HOH HOH . I 6 HOH A 18 926 20 HOH HOH . I 6 HOH A 19 927 21 HOH HOH . I 6 HOH A 20 928 22 HOH HOH . I 6 HOH A 21 929 23 HOH HOH . I 6 HOH A 22 930 24 HOH HOH . I 6 HOH A 23 931 25 HOH HOH . I 6 HOH A 24 932 26 HOH HOH . I 6 HOH A 25 933 27 HOH HOH . I 6 HOH A 26 934 28 HOH HOH . I 6 HOH A 27 935 29 HOH HOH . I 6 HOH A 28 936 30 HOH HOH . I 6 HOH A 29 937 31 HOH HOH . I 6 HOH A 30 938 32 HOH HOH . I 6 HOH A 31 939 33 HOH HOH . I 6 HOH A 32 940 34 HOH HOH . I 6 HOH A 33 941 35 HOH HOH . I 6 HOH A 34 942 36 HOH HOH . I 6 HOH A 35 943 37 HOH HOH . I 6 HOH A 36 944 38 HOH HOH . I 6 HOH A 37 945 39 HOH HOH . I 6 HOH A 38 946 40 HOH HOH . I 6 HOH A 39 947 41 HOH HOH . I 6 HOH A 40 948 42 HOH HOH . I 6 HOH A 41 949 43 HOH HOH . I 6 HOH A 42 950 44 HOH HOH . I 6 HOH A 43 951 45 HOH HOH . I 6 HOH A 44 952 46 HOH HOH . I 6 HOH A 45 953 47 HOH HOH . I 6 HOH A 46 954 48 HOH HOH . I 6 HOH A 47 955 49 HOH HOH . I 6 HOH A 48 956 50 HOH HOH . I 6 HOH A 49 957 52 HOH HOH . I 6 HOH A 50 958 53 HOH HOH . I 6 HOH A 51 959 54 HOH HOH . I 6 HOH A 52 960 55 HOH HOH . I 6 HOH A 53 961 57 HOH HOH . I 6 HOH A 54 962 59 HOH HOH . I 6 HOH A 55 963 60 HOH HOH . I 6 HOH A 56 964 61 HOH HOH . I 6 HOH A 57 965 62 HOH HOH . I 6 HOH A 58 966 63 HOH HOH . I 6 HOH A 59 967 64 HOH HOH . I 6 HOH A 60 968 65 HOH HOH . I 6 HOH A 61 969 66 HOH HOH . I 6 HOH A 62 970 67 HOH HOH . I 6 HOH A 63 971 69 HOH HOH . I 6 HOH A 64 972 70 HOH HOH . I 6 HOH A 65 973 71 HOH HOH . I 6 HOH A 66 974 72 HOH HOH . I 6 HOH A 67 975 73 HOH HOH . I 6 HOH A 68 976 74 HOH HOH . I 6 HOH A 69 977 75 HOH HOH . I 6 HOH A 70 978 76 HOH HOH . I 6 HOH A 71 979 77 HOH HOH . I 6 HOH A 72 980 78 HOH HOH . I 6 HOH A 73 981 79 HOH HOH . I 6 HOH A 74 982 80 HOH HOH . I 6 HOH A 75 983 81 HOH HOH . I 6 HOH A 76 984 82 HOH HOH . I 6 HOH A 77 985 83 HOH HOH . I 6 HOH A 78 986 85 HOH HOH . I 6 HOH A 79 987 86 HOH HOH . I 6 HOH A 80 988 87 HOH HOH . I 6 HOH A 81 989 89 HOH HOH . I 6 HOH A 82 990 90 HOH HOH . I 6 HOH A 83 991 91 HOH HOH . I 6 HOH A 84 992 92 HOH HOH . I 6 HOH A 85 993 93 HOH HOH . I 6 HOH A 86 994 94 HOH HOH . I 6 HOH A 87 995 95 HOH HOH . I 6 HOH A 88 996 96 HOH HOH . I 6 HOH A 89 997 97 HOH HOH . I 6 HOH A 90 998 98 HOH HOH . I 6 HOH A 91 999 99 HOH HOH . I 6 HOH A 92 1000 100 HOH HOH . I 6 HOH A 93 1001 101 HOH HOH . I 6 HOH A 94 1002 102 HOH HOH . I 6 HOH A 95 1003 103 HOH HOH . I 6 HOH A 96 1004 104 HOH HOH . I 6 HOH A 97 1005 105 HOH HOH . I 6 HOH A 98 1006 106 HOH HOH . I 6 HOH A 99 1007 107 HOH HOH . I 6 HOH A 100 1008 108 HOH HOH . I 6 HOH A 101 1009 109 HOH HOH . I 6 HOH A 102 1010 110 HOH HOH . I 6 HOH A 103 1011 111 HOH HOH . I 6 HOH A 104 1012 112 HOH HOH . I 6 HOH A 105 1013 113 HOH HOH . I 6 HOH A 106 1014 114 HOH HOH . I 6 HOH A 107 1015 115 HOH HOH . I 6 HOH A 108 1016 116 HOH HOH . I 6 HOH A 109 1017 117 HOH HOH . I 6 HOH A 110 1018 118 HOH HOH . I 6 HOH A 111 1019 119 HOH HOH . I 6 HOH A 112 1020 120 HOH HOH . I 6 HOH A 113 1021 121 HOH HOH . I 6 HOH A 114 1022 122 HOH HOH . I 6 HOH A 115 1023 123 HOH HOH . I 6 HOH A 116 1024 124 HOH HOH . I 6 HOH A 117 1025 125 HOH HOH . I 6 HOH A 118 1026 126 HOH HOH . I 6 HOH A 119 1027 127 HOH HOH . I 6 HOH A 120 1028 128 HOH HOH . I 6 HOH A 121 1029 129 HOH HOH . I 6 HOH A 122 1030 130 HOH HOH . I 6 HOH A 123 1031 131 HOH HOH . I 6 HOH A 124 1032 134 HOH HOH . I 6 HOH A 125 1033 135 HOH HOH . I 6 HOH A 126 1034 136 HOH HOH . I 6 HOH A 127 1035 137 HOH HOH . I 6 HOH A 128 1036 138 HOH HOH . I 6 HOH A 129 1037 139 HOH HOH . I 6 HOH A 130 1038 140 HOH HOH . I 6 HOH A 131 1039 141 HOH HOH . I 6 HOH A 132 1040 143 HOH HOH . I 6 HOH A 133 1041 144 HOH HOH . I 6 HOH A 134 1042 145 HOH HOH . I 6 HOH A 135 1043 146 HOH HOH . I 6 HOH A 136 1044 147 HOH HOH . I 6 HOH A 137 1045 148 HOH HOH . I 6 HOH A 138 1046 149 HOH HOH . I 6 HOH A 139 1047 150 HOH HOH . I 6 HOH A 140 1048 151 HOH HOH . I 6 HOH A 141 1049 152 HOH HOH . I 6 HOH A 142 1050 153 HOH HOH . I 6 HOH A 143 1051 154 HOH HOH . I 6 HOH A 144 1052 155 HOH HOH . I 6 HOH A 145 1053 156 HOH HOH . I 6 HOH A 146 1054 157 HOH HOH . I 6 HOH A 147 1055 158 HOH HOH . I 6 HOH A 148 1056 159 HOH HOH . I 6 HOH A 149 1057 160 HOH HOH . I 6 HOH A 150 1058 161 HOH HOH . I 6 HOH A 151 1059 162 HOH HOH . I 6 HOH A 152 1060 163 HOH HOH . I 6 HOH A 153 1061 164 HOH HOH . I 6 HOH A 154 1062 165 HOH HOH . I 6 HOH A 155 1063 166 HOH HOH . I 6 HOH A 156 1064 167 HOH HOH . I 6 HOH A 157 1065 168 HOH HOH . I 6 HOH A 158 1066 169 HOH HOH . I 6 HOH A 159 1067 170 HOH HOH . I 6 HOH A 160 1068 171 HOH HOH . I 6 HOH A 161 1069 172 HOH HOH . I 6 HOH A 162 1070 173 HOH HOH . I 6 HOH A 163 1071 174 HOH HOH . I 6 HOH A 164 1072 175 HOH HOH . I 6 HOH A 165 1073 176 HOH HOH . I 6 HOH A 166 1074 177 HOH HOH . I 6 HOH A 167 1075 178 HOH HOH . I 6 HOH A 168 1076 179 HOH HOH . I 6 HOH A 169 1077 180 HOH HOH . I 6 HOH A 170 1078 181 HOH HOH . I 6 HOH A 171 1079 182 HOH HOH . I 6 HOH A 172 1080 183 HOH HOH . I 6 HOH A 173 1081 184 HOH HOH . I 6 HOH A 174 1082 185 HOH HOH . I 6 HOH A 175 1083 186 HOH HOH . I 6 HOH A 176 1084 187 HOH HOH . I 6 HOH A 177 1085 188 HOH HOH . I 6 HOH A 178 1086 189 HOH HOH . I 6 HOH A 179 1087 190 HOH HOH . I 6 HOH A 180 1088 191 HOH HOH . I 6 HOH A 181 1089 192 HOH HOH . I 6 HOH A 182 1090 194 HOH HOH . I 6 HOH A 183 1091 196 HOH HOH . I 6 HOH A 184 1092 197 HOH HOH . I 6 HOH A 185 1093 198 HOH HOH . I 6 HOH A 186 1094 199 HOH HOH . I 6 HOH A 187 1095 200 HOH HOH . I 6 HOH A 188 1096 201 HOH HOH . I 6 HOH A 189 1097 202 HOH HOH . I 6 HOH A 190 1098 203 HOH HOH . I 6 HOH A 191 1099 204 HOH HOH . I 6 HOH A 192 1100 205 HOH HOH . I 6 HOH A 193 1101 206 HOH HOH . I 6 HOH A 194 1102 207 HOH HOH . I 6 HOH A 195 1103 208 HOH HOH . I 6 HOH A 196 1104 209 HOH HOH . I 6 HOH A 197 1105 210 HOH HOH . I 6 HOH A 198 1106 211 HOH HOH . I 6 HOH A 199 1107 212 HOH HOH . I 6 HOH A 200 1108 214 HOH HOH . I 6 HOH A 201 1109 215 HOH HOH . I 6 HOH A 202 1110 217 HOH HOH . I 6 HOH A 203 1111 218 HOH HOH . I 6 HOH A 204 1112 219 HOH HOH . I 6 HOH A 205 1113 220 HOH HOH . I 6 HOH A 206 1114 221 HOH HOH . I 6 HOH A 207 1115 222 HOH HOH . I 6 HOH A 208 1116 223 HOH HOH . I 6 HOH A 209 1117 224 HOH HOH . I 6 HOH A 210 1118 225 HOH HOH . I 6 HOH A 211 1119 226 HOH HOH . I 6 HOH A 212 1120 227 HOH HOH . I 6 HOH A 213 1121 228 HOH HOH . I 6 HOH A 214 1122 229 HOH HOH . J 6 HOH T 1 19 17 HOH HOH . J 6 HOH T 2 51 51 HOH HOH . J 6 HOH T 3 56 56 HOH HOH . J 6 HOH T 4 58 58 HOH HOH . J 6 HOH T 5 68 68 HOH HOH . J 6 HOH T 6 84 84 HOH HOH . J 6 HOH T 7 88 88 HOH HOH . J 6 HOH T 8 132 132 HOH HOH . J 6 HOH T 9 133 133 HOH HOH . J 6 HOH T 10 142 142 HOH HOH . J 6 HOH T 11 193 193 HOH HOH . J 6 HOH T 12 213 213 HOH HOH . J 6 HOH T 13 216 216 HOH HOH . K 6 HOH P 1 16 16 HOH HOH . K 6 HOH P 2 195 195 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 UPC . . . D 4 -0.833 -8.389 45.56 1 24.61 ? N1 UPC 904 A 1 HETATM 2 C C2 UPC . . . D 4 -1.271 -7.724 44.387 1 24.2 ? C2 UPC 904 A 1 HETATM 3 O O2 UPC . . . D 4 -1.724 -6.44 44.445 1 23.33 ? O2 UPC 904 A 1 HETATM 4 N N3 UPC . . . D 4 -1.238 -8.355 43.188 1 27.64 ? N3 UPC 904 A 1 HETATM 5 C C4 UPC . . . D 4 -0.802 -9.629 43.082 1 30.86 ? C4 UPC 904 A 1 HETATM 6 O O4 UPC . . . D 4 -0.78 -10.235 41.861 1 30.49 ? O4 UPC 904 A 1 HETATM 7 C C5 UPC . . . D 4 -0.383 -10.308 44.23 1 30.67 ? C5 UPC 904 A 1 HETATM 8 C C6 UPC . . . D 4 -0.408 -9.663 45.47 1 25.83 ? C6 UPC 904 A 1 HETATM 9 P PA UPC . . . D 4 -0.49 -12.733 48.734 1 24.49 ? PA UPC 904 A 1 HETATM 10 P PB UPC . . . D 4 -3.649 -12.461 49.401 1 27.28 ? PB UPC 904 A 1 HETATM 11 P PG UPC . . . D 4 -4.259 -14.949 50.602 1 24.54 ? PG UPC 904 A 1 HETATM 12 C C1' UPC . . . D 4 -0.91 -7.698 46.858 1 23.32 ? C1' UPC 904 A 1 HETATM 13 O O1A UPC . . . D 4 0.007 -13.551 47.574 1 30.68 ? O1A UPC 904 A 1 HETATM 14 O O1B UPC . . . D 4 -4.328 -11.607 48.357 1 25.22 ? O1B UPC 904 A 1 HETATM 15 O O1G UPC . . . D 4 -2.878 -14.79 51.193 1 29.99 ? O1G UPC 904 A 1 HETATM 16 C C2' UPC . . . D 4 -2.366 -7.736 47.332 1 20.92 ? C2' UPC 904 A 1 HETATM 17 O O2A UPC . . . D 4 0.007 -13.064 50.127 1 27.19 ? O2A UPC 904 A 1 HETATM 18 O O2B UPC . . . D 4 -3.438 -11.912 50.783 1 26.92 ? O2B UPC 904 A 1 HETATM 19 O O2G UPC . . . D 4 -5.471 -14.893 51.479 1 28.49 ? O2G UPC 904 A 1 HETATM 20 C C3' UPC . . . D 4 -2.409 -8.983 48.187 1 20.86 ? C3' UPC 904 A 1 HETATM 21 O O3' UPC . . . D 4 -3.526 -8.98 49.088 1 21.25 ? O3' UPC 904 A 1 HETATM 22 C C3A UPC . . . D 4 -2.093 -12.619 48.96 1 26.82 ? C3A UPC 904 A 1 HETATM 23 O O3B UPC . . . D 4 -4.471 -13.84 49.476 1 28.2 ? O3B UPC 904 A 1 HETATM 24 O O3G UPC . . . D 4 -4.278 -16.403 49.236 1 21.35 ? O3G UPC 904 A 1 HETATM 25 C C4' UPC . . . D 4 -1.06 -8.902 48.882 1 21.31 ? C4' UPC 904 A 1 HETATM 26 O O4' UPC . . . D 4 -0.192 -8.406 47.863 1 25.88 ? O4' UPC 904 A 1 HETATM 27 C C5' UPC . . . D 4 -0.54 -10.208 49.49 1 21.26 ? C5' UPC 904 A 1 HETATM 28 O O5' UPC . . . D 4 -0.204 -11.166 48.472 1 25.84 ? O5' UPC 904 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #