data_3SQX
#
_model_server_result.job_id            wuHxyNFNjGIDqNQSlUxiBA 
_model_server_result.datetime_utc      '2024-10-20 03:24:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3sqx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":800}' 
#
_entry.id    3SQX 
#
_exptl.entry_id    3SQX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              506.196 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3SQX 
_cell.length_a            88.943 
_cell.length_b            127.043 
_cell.length_c            55.883 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3SQX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C O1G ANP . A ANP 800 1_555 D MG MG . A MG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
metalc ? metalc2 C O1B ANP . A ANP 800 1_555 D MG MG . A MG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
metalc ? metalc3 D MG MG . A MG 900 1_555 E O HOH . A HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? 
metalc ? metalc4 D MG MG . A MG 900 1_555 E O HOH . A HOH 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? 
metalc ? metalc5 D MG MG . A MG 900 1_555 E O HOH . A HOH 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
metalc ? metalc6 D MG MG . A MG 900 1_555 E O HOH . A HOH 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? 
#
_chem_comp.formula           'C10 H17 N6 O12 P3' 
_chem_comp.formula_weight    506.196 
_chem_comp.id                ANP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ANP doub 13 n n 
PG O2G ANP sing 14 n n 
PG O3G ANP sing 15 n n 
PG N3B ANP sing 16 n n 
O2G HOG2 ANP sing 17 n n 
O3G HOG3 ANP sing 18 n n 
PB O1B ANP doub 19 n n 
PB O2B ANP sing 20 n n 
PB N3B ANP sing 21 n n 
PB O3A ANP sing 22 n n 
O2B HOB2 ANP sing 23 n n 
N3B HNB1 ANP sing 24 n n 
PA O1A ANP doub 25 n n 
PA O2A ANP sing 26 n n 
PA O3A ANP sing 27 n n 
PA O5' ANP sing 28 n n 
O2A HOA2 ANP sing 29 n n 
O5' C5' ANP sing 30 n n 
C5' C4' ANP sing 31 n n 
C5' "H5'1" ANP sing 32 n n 
C5' "H5'2" ANP sing 33 n n 
C4' O4' ANP sing 34 n n 
C4' C3' ANP sing 35 n n 
C4' H4' ANP sing 36 n n 
O4' C1' ANP sing 37 n n 
C3' O3' ANP sing 38 n n 
C3' C2' ANP sing 39 n n 
C3' H3' ANP sing 40 n n 
O3' HO3' ANP sing 41 n n 
C2' O2' ANP sing 42 n n 
C2' C1' ANP sing 43 n n 
C2' H2' ANP sing 44 n n 
O2' HO2' ANP sing 45 n n 
C1' N9 ANP sing 46 n n 
C1' H1' ANP sing 47 n n 
N9 C8 ANP sing 48 n y 
N9 C4 ANP sing 49 n y 
C8 N7 ANP doub 50 n y 
C8 H8 ANP sing 51 n n 
N7 C5 ANP sing 52 n y 
C5 C6 ANP sing 53 n y 
C5 C4 ANP doub 54 n y 
C6 N6 ANP sing 55 n n 
C6 N1 ANP doub 56 n y 
N6 HN61 ANP sing 57 n n 
N6 HN62 ANP sing 58 n n 
N1 C2 ANP sing 59 n y 
C2 N3 ANP doub 60 n y 
C2 H2 ANP sing 61 n n 
N3 C4 ANP sing 62 n y 
#
_atom_sites.entry_id                     3SQX 
_atom_sites.fract_transf_matrix[1][1]    0.011243 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007871 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017895 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ANP A 1 800 800 ANP ANP . 
D 4 MG A 1 900 900 MG MG . 
E 5 HOH A 1 1001 1001 HOH HOH . 
E 5 HOH A 2 1002 1002 HOH HOH . 
E 5 HOH A 3 1003 1003 HOH HOH . 
E 5 HOH A 4 1004 1004 HOH HOH . 
E 5 HOH A 5 1005 1005 HOH HOH . 
E 5 HOH A 6 1006 1006 HOH HOH . 
E 5 HOH A 7 1007 1007 HOH HOH . 
E 5 HOH A 8 1008 1008 HOH HOH . 
E 5 HOH A 9 1009 1009 HOH HOH . 
E 5 HOH A 10 1010 1010 HOH HOH . 
E 5 HOH A 11 1011 1011 HOH HOH . 
E 5 HOH A 12 1012 1012 HOH HOH . 
E 5 HOH A 13 1013 1013 HOH HOH . 
E 5 HOH A 14 1014 1014 HOH HOH . 
E 5 HOH A 15 1015 1015 HOH HOH . 
E 5 HOH A 16 1016 1016 HOH HOH . 
E 5 HOH A 17 1017 1017 HOH HOH . 
E 5 HOH A 18 1018 1018 HOH HOH . 
E 5 HOH A 19 1019 1019 HOH HOH . 
E 5 HOH A 20 1020 1020 HOH HOH . 
E 5 HOH A 21 1021 1021 HOH HOH . 
E 5 HOH A 22 1022 1022 HOH HOH . 
E 5 HOH A 23 1023 1023 HOH HOH . 
E 5 HOH A 24 1024 1024 HOH HOH . 
E 5 HOH A 25 1025 1025 HOH HOH . 
E 5 HOH A 26 1026 1026 HOH HOH . 
E 5 HOH A 27 1027 1027 HOH HOH . 
E 5 HOH A 28 1028 1028 HOH HOH . 
E 5 HOH A 29 1029 1029 HOH HOH . 
E 5 HOH A 30 1030 1030 HOH HOH . 
E 5 HOH A 31 1031 1031 HOH HOH . 
E 5 HOH A 32 1032 1032 HOH HOH . 
E 5 HOH A 33 1033 1033 HOH HOH . 
E 5 HOH A 34 1034 1034 HOH HOH . 
E 5 HOH A 35 1035 1035 HOH HOH . 
E 5 HOH A 36 1036 1036 HOH HOH . 
E 5 HOH A 37 1037 1037 HOH HOH . 
E 5 HOH A 38 1038 1038 HOH HOH . 
E 5 HOH A 39 1039 1039 HOH HOH . 
E 5 HOH A 40 1040 1040 HOH HOH . 
E 5 HOH A 41 1041 1041 HOH HOH . 
E 5 HOH A 42 1042 1042 HOH HOH . 
E 5 HOH A 43 1043 1043 HOH HOH . 
E 5 HOH A 44 1044 1044 HOH HOH . 
E 5 HOH A 45 1045 1045 HOH HOH . 
E 5 HOH A 46 1046 1046 HOH HOH . 
E 5 HOH A 47 1047 1047 HOH HOH . 
E 5 HOH A 48 1048 1048 HOH HOH . 
E 5 HOH A 49 1049 1049 HOH HOH . 
E 5 HOH A 50 1050 1050 HOH HOH . 
E 5 HOH A 51 1051 1051 HOH HOH . 
E 5 HOH A 52 1052 1052 HOH HOH . 
E 5 HOH A 53 1054 1054 HOH HOH . 
E 5 HOH A 54 1055 1055 HOH HOH . 
E 5 HOH A 55 1056 1056 HOH HOH . 
E 5 HOH A 56 1057 1057 HOH HOH . 
E 5 HOH A 57 1058 1058 HOH HOH . 
E 5 HOH A 58 1060 1060 HOH HOH . 
E 5 HOH A 59 1062 1062 HOH HOH . 
E 5 HOH A 60 1063 1063 HOH HOH . 
E 5 HOH A 61 1064 1064 HOH HOH . 
E 5 HOH A 62 1065 1065 HOH HOH . 
E 5 HOH A 63 1066 1066 HOH HOH . 
E 5 HOH A 64 1067 1067 HOH HOH . 
E 5 HOH A 65 1068 1068 HOH HOH . 
E 5 HOH A 66 1069 1069 HOH HOH . 
E 5 HOH A 67 1070 1070 HOH HOH . 
E 5 HOH A 68 1071 1071 HOH HOH . 
E 5 HOH A 69 1072 1072 HOH HOH . 
E 5 HOH A 70 1073 1073 HOH HOH . 
E 5 HOH A 71 1074 1074 HOH HOH . 
E 5 HOH A 72 1075 1075 HOH HOH . 
E 5 HOH A 73 1076 1076 HOH HOH . 
E 5 HOH A 74 1077 1077 HOH HOH . 
E 5 HOH A 75 1078 1078 HOH HOH . 
E 5 HOH A 76 1079 1079 HOH HOH . 
E 5 HOH A 77 1080 1080 HOH HOH . 
E 5 HOH A 78 1081 1081 HOH HOH . 
E 5 HOH A 79 1082 1082 HOH HOH . 
E 5 HOH A 80 1083 1083 HOH HOH . 
E 5 HOH A 81 1084 1084 HOH HOH . 
E 5 HOH A 82 1085 1085 HOH HOH . 
E 5 HOH A 83 1086 1086 HOH HOH . 
E 5 HOH A 84 1087 1087 HOH HOH . 
E 5 HOH A 85 1088 1088 HOH HOH . 
E 5 HOH A 86 1090 1090 HOH HOH . 
E 5 HOH A 87 1091 1091 HOH HOH . 
E 5 HOH A 88 1092 1092 HOH HOH . 
E 5 HOH A 89 1093 1093 HOH HOH . 
E 5 HOH A 90 1094 1094 HOH HOH . 
E 5 HOH A 91 1095 1095 HOH HOH . 
E 5 HOH A 92 1096 1096 HOH HOH . 
E 5 HOH A 93 1097 1097 HOH HOH . 
E 5 HOH A 94 1098 1098 HOH HOH . 
E 5 HOH A 95 1099 1099 HOH HOH . 
E 5 HOH A 96 1101 1101 HOH HOH . 
E 5 HOH A 97 1102 1102 HOH HOH . 
E 5 HOH A 98 1103 1103 HOH HOH . 
F 5 HOH B 1 1053 1053 HOH HOH . 
F 5 HOH B 2 1059 1059 HOH HOH . 
F 5 HOH B 3 1061 1061 HOH HOH . 
F 5 HOH B 4 1089 1089 HOH HOH . 
F 5 HOH B 5 1100 1100 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ANP . . . C 3 71.196 27.973 16.758 1 38.72 ? PG ANP 800 A 1 
HETATM 2 O O1G ANP . . . C 3 71.905 28.458 15.523 1 38.14 ? O1G ANP 800 A 1 
HETATM 3 O O2G ANP . . . C 3 72.101 27.73 17.946 1 41.21 ? O2G ANP 800 A 1 
HETATM 4 O O3G ANP . . . C 3 70.268 26.792 16.509 1 42.38 ? O3G ANP 800 A 1 
HETATM 5 P PB ANP . . . C 3 70.489 30.935 17.19 1 38.4 ? PB ANP 800 A 1 
HETATM 6 O O1B ANP . . . C 3 71.489 31.235 16.112 1 34.29 ? O1B ANP 800 A 1 
HETATM 7 O O2B ANP . . . C 3 70.855 31.284 18.614 1 37.51 ? O2B ANP 800 A 1 
HETATM 8 N N3B ANP . . . C 3 70.096 29.239 17.167 1 39.05 ? N3B ANP 800 A 1 
HETATM 9 P PA ANP . . . C 3 68.723 32.449 15.53 1 38.87 ? PA ANP 800 A 1 
HETATM 10 O O1A ANP . . . C 3 69.664 33.612 15.463 1 34.93 ? O1A ANP 800 A 1 
HETATM 11 O O2A ANP . . . C 3 68.595 31.542 14.331 1 34.71 ? O2A ANP 800 A 1 
HETATM 12 O O3A ANP . . . C 3 69.055 31.609 16.868 1 37.74 ? O3A ANP 800 A 1 
HETATM 13 O O5' ANP . . . C 3 67.276 33.063 15.883 1 39.39 ? O5' ANP 800 A 1 
HETATM 14 C C5' ANP . . . C 3 66.136 32.227 16.065 1 42.8 ? C5' ANP 800 A 1 
HETATM 15 C C4' ANP . . . C 3 64.829 32.963 15.804 1 43.3 ? C4' ANP 800 A 1 
HETATM 16 O O4' ANP . . . C 3 64.671 33.97 16.806 1 46.17 ? O4' ANP 800 A 1 
HETATM 17 C C3' ANP . . . C 3 64.788 33.677 14.459 1 43.74 ? C3' ANP 800 A 1 
HETATM 18 O O3' ANP . . . C 3 63.621 33.293 13.739 1 42.1 ? O3' ANP 800 A 1 
HETATM 19 C C2' ANP . . . C 3 64.74 35.166 14.788 1 44.55 ? C2' ANP 800 A 1 
HETATM 20 O O2' ANP . . . C 3 63.816 35.889 13.975 1 47.76 ? O2' ANP 800 A 1 
HETATM 21 C C1' ANP . . . C 3 64.256 35.196 16.218 1 46.09 ? C1' ANP 800 A 1 
HETATM 22 N N9 ANP . . . C 3 64.812 36.303 17.025 1 47.77 ? N9 ANP 800 A 1 
HETATM 23 C C8 ANP . . . C 3 66.045 36.836 16.96 1 45.72 ? C8 ANP 800 A 1 
HETATM 24 N N7 ANP . . . C 3 66.182 37.816 17.881 1 46.71 ? N7 ANP 800 A 1 
HETATM 25 C C5 ANP . . . C 3 65.02 37.914 18.553 1 48.14 ? C5 ANP 800 A 1 
HETATM 26 C C6 ANP . . . C 3 64.486 38.752 19.649 1 48.71 ? C6 ANP 800 A 1 
HETATM 27 N N6 ANP . . . C 3 65.259 39.694 20.221 1 47.93 ? N6 ANP 800 A 1 
HETATM 28 N N1 ANP . . . C 3 63.225 38.525 20.065 1 50.91 ? N1 ANP 800 A 1 
HETATM 29 C C2 ANP . . . C 3 62.452 37.577 19.501 1 53.16 ? C2 ANP 800 A 1 
HETATM 30 N N3 ANP . . . C 3 62.876 36.787 18.487 1 51.16 ? N3 ANP 800 A 1 
HETATM 31 C C4 ANP . . . C 3 64.123 36.91 17.988 1 48.19 ? C4 ANP 800 A 1 
#
_model_server_stats.io_time_ms              38 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           31 
#