data_3SR5
#
_model_server_result.job_id            GDsE9RgFGw2fpNvaYWAU-Q 
_model_server_result.datetime_utc      '2024-11-27 20:37:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3sr5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":168}' 
#
_entry.id    3SR5 
#
_exptl.entry_id    3SR5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3SR5 
_cell.length_a            79.173 
_cell.length_b            79.173 
_cell.length_c            107.235 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3SR5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 224 n n 
PA O2A NAP sing 225 n n 
PA O5B NAP sing 226 n n 
PA O3 NAP sing 227 n n 
O2A HOA2 NAP sing 228 n n 
O5B C5B NAP sing 229 n n 
C5B C4B NAP sing 230 n n 
C5B H51A NAP sing 231 n n 
C5B H52A NAP sing 232 n n 
C4B O4B NAP sing 233 n n 
C4B C3B NAP sing 234 n n 
C4B H4B NAP sing 235 n n 
O4B C1B NAP sing 236 n n 
C3B O3B NAP sing 237 n n 
C3B C2B NAP sing 238 n n 
C3B H3B NAP sing 239 n n 
O3B HO3A NAP sing 240 n n 
C2B O2B NAP sing 241 n n 
C2B C1B NAP sing 242 n n 
C2B H2B NAP sing 243 n n 
O2B P2B NAP sing 244 n n 
C1B N9A NAP sing 245 n n 
C1B H1B NAP sing 246 n n 
N9A C8A NAP sing 247 n y 
N9A C4A NAP sing 248 n y 
C8A N7A NAP doub 249 n y 
C8A H8A NAP sing 250 n n 
N7A C5A NAP sing 251 n y 
C5A C6A NAP sing 252 n y 
C5A C4A NAP doub 253 n y 
C6A N6A NAP sing 254 n n 
C6A N1A NAP doub 255 n y 
N6A H61A NAP sing 256 n n 
N6A H62A NAP sing 257 n n 
N1A C2A NAP sing 258 n y 
C2A N3A NAP doub 259 n y 
C2A H2A NAP sing 260 n n 
N3A C4A NAP sing 261 n y 
O3 PN NAP sing 262 n n 
PN O1N NAP doub 263 n n 
PN O2N NAP sing 264 n n 
PN O5D NAP sing 265 n n 
O5D C5D NAP sing 266 n n 
C5D C4D NAP sing 267 n n 
C5D H51N NAP sing 268 n n 
C5D H52N NAP sing 269 n n 
C4D O4D NAP sing 270 n n 
C4D C3D NAP sing 271 n n 
C4D H4D NAP sing 272 n n 
O4D C1D NAP sing 273 n n 
C3D O3D NAP sing 274 n n 
C3D C2D NAP sing 275 n n 
C3D H3D NAP sing 276 n n 
O3D HO3N NAP sing 277 n n 
C2D O2D NAP sing 278 n n 
C2D C1D NAP sing 279 n n 
C2D H2D NAP sing 280 n n 
O2D HO2N NAP sing 281 n n 
C1D N1N NAP sing 282 n n 
C1D H1D NAP sing 283 n n 
N1N C2N NAP sing 284 n y 
N1N C6N NAP doub 285 n y 
C2N C3N NAP doub 286 n y 
C2N H2N NAP sing 287 n n 
C3N C7N NAP sing 288 n n 
C3N C4N NAP sing 289 n y 
C7N O7N NAP doub 290 n n 
C7N N7N NAP sing 291 n n 
N7N H71N NAP sing 292 n n 
N7N H72N NAP sing 293 n n 
C4N C5N NAP doub 294 n y 
C4N H4N NAP sing 295 n n 
C5N C6N NAP sing 296 n y 
C5N H5N NAP sing 297 n n 
C6N H6N NAP sing 298 n n 
P2B O1X NAP doub 299 n n 
P2B O2X NAP sing 300 n n 
P2B O3X NAP sing 301 n n 
O2X HOP2 NAP sing 302 n n 
O3X HOP3 NAP sing 303 n n 
#
_atom_sites.entry_id                     3SR5 
_atom_sites.fract_transf_matrix[1][1]    0.012631 
_atom_sites.fract_transf_matrix[1][2]    0.007292 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014584 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009325 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAP X 1 168 160 NAP NAP . 
C 3 Q12 X 1 169 159 Q12 Q12 . 
D 4 HOH X 1 1 1 HOH HOH . 
D 4 HOH X 2 170 2 HOH HOH . 
D 4 HOH X 3 171 3 HOH HOH . 
D 4 HOH X 4 172 4 HOH HOH . 
D 4 HOH X 5 173 5 HOH HOH . 
D 4 HOH X 6 174 6 HOH HOH . 
D 4 HOH X 7 175 7 HOH HOH . 
D 4 HOH X 8 176 8 HOH HOH . 
D 4 HOH X 9 177 9 HOH HOH . 
D 4 HOH X 10 178 10 HOH HOH . 
D 4 HOH X 11 179 11 HOH HOH . 
D 4 HOH X 12 180 12 HOH HOH . 
D 4 HOH X 13 181 13 HOH HOH . 
D 4 HOH X 14 182 14 HOH HOH . 
D 4 HOH X 15 183 15 HOH HOH . 
D 4 HOH X 16 184 16 HOH HOH . 
D 4 HOH X 17 185 17 HOH HOH . 
D 4 HOH X 18 186 18 HOH HOH . 
D 4 HOH X 19 187 19 HOH HOH . 
D 4 HOH X 20 188 20 HOH HOH . 
D 4 HOH X 21 189 21 HOH HOH . 
D 4 HOH X 22 190 22 HOH HOH . 
D 4 HOH X 23 191 23 HOH HOH . 
D 4 HOH X 24 192 24 HOH HOH . 
D 4 HOH X 25 193 25 HOH HOH . 
D 4 HOH X 26 194 26 HOH HOH . 
D 4 HOH X 27 195 28 HOH HOH . 
D 4 HOH X 28 196 29 HOH HOH . 
D 4 HOH X 29 197 30 HOH HOH . 
D 4 HOH X 30 198 31 HOH HOH . 
D 4 HOH X 31 199 32 HOH HOH . 
D 4 HOH X 32 200 33 HOH HOH . 
D 4 HOH X 33 201 34 HOH HOH . 
D 4 HOH X 34 202 36 HOH HOH . 
D 4 HOH X 35 203 37 HOH HOH . 
D 4 HOH X 36 204 38 HOH HOH . 
D 4 HOH X 37 205 40 HOH HOH . 
D 4 HOH X 38 206 41 HOH HOH . 
D 4 HOH X 39 207 43 HOH HOH . 
D 4 HOH X 40 208 44 HOH HOH . 
D 4 HOH X 41 209 45 HOH HOH . 
D 4 HOH X 42 210 46 HOH HOH . 
D 4 HOH X 43 211 47 HOH HOH . 
D 4 HOH X 44 212 48 HOH HOH . 
D 4 HOH X 45 213 51 HOH HOH . 
D 4 HOH X 46 214 52 HOH HOH . 
D 4 HOH X 47 215 53 HOH HOH . 
D 4 HOH X 48 216 54 HOH HOH . 
D 4 HOH X 49 217 55 HOH HOH . 
D 4 HOH X 50 218 56 HOH HOH . 
D 4 HOH X 51 219 57 HOH HOH . 
D 4 HOH X 52 220 58 HOH HOH . 
D 4 HOH X 53 221 59 HOH HOH . 
D 4 HOH X 54 222 60 HOH HOH . 
D 4 HOH X 55 223 61 HOH HOH . 
D 4 HOH X 56 224 62 HOH HOH . 
D 4 HOH X 57 225 63 HOH HOH . 
D 4 HOH X 58 226 64 HOH HOH . 
D 4 HOH X 59 227 65 HOH HOH . 
D 4 HOH X 60 228 66 HOH HOH . 
D 4 HOH X 61 229 67 HOH HOH . 
D 4 HOH X 62 230 69 HOH HOH . 
D 4 HOH X 63 231 70 HOH HOH . 
D 4 HOH X 64 232 75 HOH HOH . 
D 4 HOH X 65 233 77 HOH HOH . 
D 4 HOH X 66 234 78 HOH HOH . 
D 4 HOH X 67 235 79 HOH HOH . 
D 4 HOH X 68 236 80 HOH HOH . 
D 4 HOH X 69 237 81 HOH HOH . 
D 4 HOH X 70 238 82 HOH HOH . 
D 4 HOH X 71 239 84 HOH HOH . 
D 4 HOH X 72 240 86 HOH HOH . 
D 4 HOH X 73 241 87 HOH HOH . 
D 4 HOH X 74 242 88 HOH HOH . 
D 4 HOH X 75 243 89 HOH HOH . 
D 4 HOH X 76 244 90 HOH HOH . 
D 4 HOH X 77 245 91 HOH HOH . 
D 4 HOH X 78 246 92 HOH HOH . 
D 4 HOH X 79 247 95 HOH HOH . 
D 4 HOH X 80 248 96 HOH HOH . 
D 4 HOH X 81 249 97 HOH HOH . 
D 4 HOH X 82 250 99 HOH HOH . 
D 4 HOH X 83 251 100 HOH HOH . 
D 4 HOH X 84 252 101 HOH HOH . 
D 4 HOH X 85 253 102 HOH HOH . 
D 4 HOH X 86 254 103 HOH HOH . 
D 4 HOH X 87 255 104 HOH HOH . 
D 4 HOH X 88 256 105 HOH HOH . 
D 4 HOH X 89 257 106 HOH HOH . 
D 4 HOH X 90 258 107 HOH HOH . 
D 4 HOH X 91 259 108 HOH HOH . 
D 4 HOH X 92 260 109 HOH HOH . 
D 4 HOH X 93 261 110 HOH HOH . 
D 4 HOH X 94 262 111 HOH HOH . 
D 4 HOH X 95 263 115 HOH HOH . 
D 4 HOH X 96 264 116 HOH HOH . 
D 4 HOH X 97 265 117 HOH HOH . 
D 4 HOH X 98 266 119 HOH HOH . 
D 4 HOH X 99 267 120 HOH HOH . 
D 4 HOH X 100 268 121 HOH HOH . 
D 4 HOH X 101 269 123 HOH HOH . 
D 4 HOH X 102 270 124 HOH HOH . 
D 4 HOH X 103 271 125 HOH HOH . 
D 4 HOH X 104 272 127 HOH HOH . 
D 4 HOH X 105 273 128 HOH HOH . 
D 4 HOH X 106 274 129 HOH HOH . 
D 4 HOH X 107 275 130 HOH HOH . 
D 4 HOH X 108 276 131 HOH HOH . 
D 4 HOH X 109 277 132 HOH HOH . 
D 4 HOH X 110 278 133 HOH HOH . 
D 4 HOH X 111 279 134 HOH HOH . 
D 4 HOH X 112 280 135 HOH HOH . 
D 4 HOH X 113 281 136 HOH HOH . 
D 4 HOH X 114 282 137 HOH HOH . 
D 4 HOH X 115 283 138 HOH HOH . 
D 4 HOH X 116 284 139 HOH HOH . 
D 4 HOH X 117 285 140 HOH HOH . 
D 4 HOH X 118 286 141 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . B 2 -6.521 -31.633 -6.367 1 18.07 ? PA NAP 168 X 1 
HETATM 2 O O1A NAP . . . B 2 -6.666 -30.371 -5.607 1 19.32 ? O1A NAP 168 X 1 
HETATM 3 O O2A NAP . . . B 2 -5.236 -32.348 -6.25 1 19.21 ? O2A NAP 168 X 1 
HETATM 4 O O5B NAP . . . B 2 -7.686 -32.664 -5.967 1 18.19 ? O5B NAP 168 X 1 
HETATM 5 C C5B NAP . . . B 2 -9.038 -32.33 -6.207 1 19.99 ? C5B NAP 168 X 1 
HETATM 6 C C4B NAP . . . B 2 -9.824 -33.356 -5.419 1 20.4 ? C4B NAP 168 X 1 
HETATM 7 O O4B NAP . . . B 2 -9.561 -33.209 -4.031 1 20.9 ? O4B NAP 168 X 1 
HETATM 8 C C3B NAP . . . B 2 -11.332 -33.222 -5.581 1 20.42 ? C3B NAP 168 X 1 
HETATM 9 O O3B NAP . . . B 2 -11.817 -33.713 -6.82 1 19.7 ? O3B NAP 168 X 1 
HETATM 10 C C2B NAP . . . B 2 -11.772 -33.997 -4.347 1 19.75 ? C2B NAP 168 X 1 
HETATM 11 O O2B NAP . . . B 2 -11.548 -35.379 -4.53 1 20.17 ? O2B NAP 168 X 1 
HETATM 12 C C1B NAP . . . B 2 -10.739 -33.535 -3.315 1 20.57 ? C1B NAP 168 X 1 
HETATM 13 N N9A NAP . . . B 2 -11.206 -32.379 -2.527 1 21.3 ? N9A NAP 168 X 1 
HETATM 14 C C8A NAP . . . B 2 -10.785 -31.07 -2.576 1 21.63 ? C8A NAP 168 X 1 
HETATM 15 N N7A NAP . . . B 2 -11.478 -30.348 -1.656 1 21.81 ? N7A NAP 168 X 1 
HETATM 16 C C5A NAP . . . B 2 -12.342 -31.194 -1.03 1 23.17 ? C5A NAP 168 X 1 
HETATM 17 C C6A NAP . . . B 2 -13.292 -31.025 -0.018 1 24.19 ? C6A NAP 168 X 1 
HETATM 18 N N6A NAP . . . B 2 -13.509 -29.829 0.54 1 23.83 ? N6A NAP 168 X 1 
HETATM 19 N N1A NAP . . . B 2 -14.025 -32.124 0.414 1 25.85 ? N1A NAP 168 X 1 
HETATM 20 C C2A NAP . . . B 2 -13.826 -33.372 -0.13 1 25.32 ? C2A NAP 168 X 1 
HETATM 21 N N3A NAP . . . B 2 -12.892 -33.544 -1.131 1 24.83 ? N3A NAP 168 X 1 
HETATM 22 C C4A NAP . . . B 2 -12.17 -32.469 -1.566 1 22.54 ? C4A NAP 168 X 1 
HETATM 23 O O3 NAP . . . B 2 -6.939 -31.392 -7.897 1 17.71 ? O3 NAP 168 X 1 
HETATM 24 P PN NAP . . . B 2 -6.768 -30.166 -8.908 1 17.83 ? PN NAP 168 X 1 
HETATM 25 O O1N NAP . . . B 2 -7.393 -28.963 -8.297 1 17.43 ? O1N NAP 168 X 1 
HETATM 26 O O2N NAP . . . B 2 -7.207 -30.608 -10.251 1 17.72 ? O2N NAP 168 X 1 
HETATM 27 O O5D NAP . . . B 2 -5.171 -29.914 -8.961 1 17.45 ? O5D NAP 168 X 1 
HETATM 28 C C5D NAP . . . B 2 -4.361 -30.874 -9.615 1 17.03 ? C5D NAP 168 X 1 
HETATM 29 C C4D NAP . . . B 2 -3.226 -30.205 -10.377 1 15.94 ? C4D NAP 168 X 1 
HETATM 30 O O4D NAP . . . B 2 -2.365 -29.538 -9.441 1 13.5 ? O4D NAP 168 X 1 
HETATM 31 C C3D NAP . . . B 2 -2.352 -31.218 -11.119 1 15.97 ? C3D NAP 168 X 1 
HETATM 32 O O3D NAP . . . B 2 -1.97 -30.713 -12.398 1 14.87 ? O3D NAP 168 X 1 
HETATM 33 C C2D NAP . . . B 2 -1.122 -31.371 -10.248 1 14.41 ? C2D NAP 168 X 1 
HETATM 34 O O2D NAP . . . B 2 0.027 -31.734 -11.005 1 16.26 ? O2D NAP 168 X 1 
HETATM 35 C C1D NAP . . . B 2 -1.034 -29.942 -9.714 1 14.47 ? C1D NAP 168 X 1 
HETATM 36 N N1N NAP . . . B 2 -0.26 -29.735 -8.493 1 14.5 ? N1N NAP 168 X 1 
HETATM 37 C C2N NAP . . . B 2 0.652 -28.73 -8.555 1 13.98 ? C2N NAP 168 X 1 
HETATM 38 C C3N NAP . . . B 2 1.416 -28.437 -7.442 1 12.42 ? C3N NAP 168 X 1 
HETATM 39 C C7N NAP . . . B 2 2.501 -27.422 -7.579 1 13.27 ? C7N NAP 168 X 1 
HETATM 40 O O7N NAP . . . B 2 2.994 -26.912 -6.418 1 13.87 ? O7N NAP 168 X 1 
HETATM 41 N N7N NAP . . . B 2 2.958 -26.973 -8.756 1 14.79 ? N7N NAP 168 X 1 
HETATM 42 C C4N NAP . . . B 2 1.21 -29.148 -6.242 1 14.96 ? C4N NAP 168 X 1 
HETATM 43 C C5N NAP . . . B 2 0.246 -30.171 -6.197 1 14.48 ? C5N NAP 168 X 1 
HETATM 44 C C6N NAP . . . B 2 -0.497 -30.452 -7.338 1 15.2 ? C6N NAP 168 X 1 
HETATM 45 P P2B NAP . . . B 2 -12.729 -36.383 -4.998 1 22.89 ? P2B NAP 168 X 1 
HETATM 46 O O1X NAP . . . B 2 -12.135 -37.772 -4.937 1 22.29 ? O1X NAP 168 X 1 
HETATM 47 O O2X NAP . . . B 2 -13.864 -36.184 -4.003 1 21.09 ? O2X NAP 168 X 1 
HETATM 48 O O3X NAP . . . B 2 -13.189 -36.037 -6.405 1 22.2 ? O3X NAP 168 X 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           48 
#