data_3SRE # _model_server_result.job_id PLZhKHgnsl0sh40GK7o2GA _model_server_result.datetime_utc '2024-10-13 04:23:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3sre # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1358}' # _entry.id 3SRE # _exptl.entry_id 3SRE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3SRE _cell.length_a 93.653 _cell.length_b 93.653 _cell.length_c 143.705 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SRE _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 53 A GLU 53 1_555 C CA CA . A CA 1357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? metalc ? metalc2 A OD2 ASP 54 A ASP 54 1_555 B CA CA . A CA 1356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc3 A O ILE 117 A ILE 117 1_555 B CA CA . A CA 1356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc4 A OD1 ASN 168 A ASN 168 1_555 C CA CA . A CA 1357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc5 A OD2 ASP 169 A ASP 169 1_555 B CA CA . A CA 1356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc6 A OD1 ASP 169 A ASP 169 1_555 B CA CA . A CA 1356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? metalc ? metalc7 A OD1 ASN 224 A ASN 224 1_555 C CA CA . A CA 1357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc8 A OD2 ASP 269 A ASP 269 1_555 C CA CA . A CA 1357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc9 A OD1 ASN 270 A ASN 270 1_555 C CA CA . A CA 1357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc10 G O HOH . A HOH 359 1_555 C CA CA . A CA 1357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc11 G O HOH . A HOH 360 1_555 B CA CA . A CA 1356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? metalc ? metalc12 G O HOH . A HOH 361 1_555 B CA CA . A CA 1356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc13 G O HOH . A HOH 379 1_555 B CA CA . A CA 1356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc14 C CA CA . A CA 1357 1_555 D O1 PO4 . A PO4 1358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 342 n n P O2 PO4 sing 343 n n P O3 PO4 sing 344 n n P O4 PO4 sing 345 n n # _atom_sites.entry_id 3SRE _atom_sites.fract_transf_matrix[1][1] 0.010678 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010678 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006959 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 1356 1356 CA CA . C 2 CA A 1 1357 1357 CA CA . D 3 PO4 A 1 1358 1358 PO4 PO4 . E 4 LMT A 1 356 1 LMT LMT . F 5 BR A 1 1360 1360 BR BR . G 6 HOH A 1 357 1 HOH HOH . G 6 HOH A 2 358 2 HOH HOH . G 6 HOH A 3 359 3 HOH HOH . G 6 HOH A 4 360 4 HOH HOH . G 6 HOH A 5 361 5 HOH HOH . G 6 HOH A 6 362 6 HOH HOH . G 6 HOH A 7 363 7 HOH HOH . G 6 HOH A 8 364 9 HOH HOH . G 6 HOH A 9 365 10 HOH HOH . G 6 HOH A 10 366 11 HOH HOH . G 6 HOH A 11 367 12 HOH HOH . G 6 HOH A 12 368 13 HOH HOH . G 6 HOH A 13 369 14 HOH HOH . G 6 HOH A 14 370 15 HOH HOH . G 6 HOH A 15 371 16 HOH HOH . G 6 HOH A 16 372 17 HOH HOH . G 6 HOH A 17 373 18 HOH HOH . G 6 HOH A 18 374 19 HOH HOH . G 6 HOH A 19 375 20 HOH HOH . G 6 HOH A 20 376 21 HOH HOH . G 6 HOH A 21 377 22 HOH HOH . G 6 HOH A 22 378 23 HOH HOH . G 6 HOH A 23 379 24 HOH HOH . G 6 HOH A 24 380 25 HOH HOH . G 6 HOH A 25 381 26 HOH HOH . G 6 HOH A 26 382 27 HOH HOH . G 6 HOH A 27 383 28 HOH HOH . G 6 HOH A 28 384 29 HOH HOH . G 6 HOH A 29 385 30 HOH HOH . G 6 HOH A 30 386 31 HOH HOH . G 6 HOH A 31 387 32 HOH HOH . G 6 HOH A 32 388 33 HOH HOH . G 6 HOH A 33 389 34 HOH HOH . G 6 HOH A 34 390 35 HOH HOH . G 6 HOH A 35 391 36 HOH HOH . G 6 HOH A 36 392 37 HOH HOH . G 6 HOH A 37 393 38 HOH HOH . G 6 HOH A 38 394 39 HOH HOH . G 6 HOH A 39 395 40 HOH HOH . G 6 HOH A 40 396 41 HOH HOH . G 6 HOH A 41 397 43 HOH HOH . G 6 HOH A 42 398 44 HOH HOH . G 6 HOH A 43 399 45 HOH HOH . G 6 HOH A 44 400 46 HOH HOH . G 6 HOH A 45 401 47 HOH HOH . G 6 HOH A 46 402 48 HOH HOH . G 6 HOH A 47 403 49 HOH HOH . G 6 HOH A 48 404 50 HOH HOH . G 6 HOH A 49 405 51 HOH HOH . G 6 HOH A 50 406 52 HOH HOH . G 6 HOH A 51 407 53 HOH HOH . G 6 HOH A 52 408 54 HOH HOH . G 6 HOH A 53 409 55 HOH HOH . G 6 HOH A 54 410 56 HOH HOH . G 6 HOH A 55 411 57 HOH HOH . G 6 HOH A 56 412 58 HOH HOH . G 6 HOH A 57 413 59 HOH HOH . G 6 HOH A 58 414 60 HOH HOH . G 6 HOH A 59 415 62 HOH HOH . G 6 HOH A 60 416 64 HOH HOH . G 6 HOH A 61 417 65 HOH HOH . G 6 HOH A 62 418 66 HOH HOH . G 6 HOH A 63 419 68 HOH HOH . G 6 HOH A 64 420 70 HOH HOH . G 6 HOH A 65 421 71 HOH HOH . G 6 HOH A 66 422 77 HOH HOH . G 6 HOH A 67 423 78 HOH HOH . G 6 HOH A 68 424 79 HOH HOH . G 6 HOH A 69 425 81 HOH HOH . G 6 HOH A 70 426 83 HOH HOH . G 6 HOH A 71 427 84 HOH HOH . G 6 HOH A 72 428 85 HOH HOH . G 6 HOH A 73 429 86 HOH HOH . G 6 HOH A 74 430 87 HOH HOH . G 6 HOH A 75 431 89 HOH HOH . G 6 HOH A 76 432 91 HOH HOH . G 6 HOH A 77 433 92 HOH HOH . G 6 HOH A 78 434 93 HOH HOH . G 6 HOH A 79 435 104 HOH HOH . G 6 HOH A 80 436 106 HOH HOH . G 6 HOH A 81 437 108 HOH HOH . G 6 HOH A 82 438 109 HOH HOH . G 6 HOH A 83 439 113 HOH HOH . G 6 HOH A 84 440 114 HOH HOH . G 6 HOH A 85 441 115 HOH HOH . G 6 HOH A 86 442 116 HOH HOH . G 6 HOH A 87 443 118 HOH HOH . G 6 HOH A 88 444 119 HOH HOH . G 6 HOH A 89 445 120 HOH HOH . G 6 HOH A 90 446 121 HOH HOH . G 6 HOH A 91 447 124 HOH HOH . G 6 HOH A 92 448 127 HOH HOH . G 6 HOH A 93 449 128 HOH HOH . G 6 HOH A 94 450 129 HOH HOH . G 6 HOH A 95 451 134 HOH HOH . G 6 HOH A 96 452 135 HOH HOH . G 6 HOH A 97 453 136 HOH HOH . G 6 HOH A 98 454 137 HOH HOH . G 6 HOH A 99 455 142 HOH HOH . G 6 HOH A 100 456 145 HOH HOH . G 6 HOH A 101 457 146 HOH HOH . G 6 HOH A 102 458 147 HOH HOH . G 6 HOH A 103 459 148 HOH HOH . G 6 HOH A 104 460 152 HOH HOH . G 6 HOH A 105 461 153 HOH HOH . G 6 HOH A 106 462 157 HOH HOH . G 6 HOH A 107 463 159 HOH HOH . G 6 HOH A 108 464 161 HOH HOH . G 6 HOH A 109 465 163 HOH HOH . G 6 HOH A 110 466 164 HOH HOH . G 6 HOH A 111 467 166 HOH HOH . G 6 HOH A 112 468 167 HOH HOH . G 6 HOH A 113 469 170 HOH HOH . G 6 HOH A 114 470 171 HOH HOH . G 6 HOH A 115 471 172 HOH HOH . G 6 HOH A 116 472 173 HOH HOH . G 6 HOH A 117 473 174 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 3 -6.824 -22.569 29.41 0.8 45.52 ? P PO4 1358 A 1 HETATM 2 O O1 PO4 . . . D 3 -5.471 -23.229 29.237 0.8 30.75 ? O1 PO4 1358 A 1 HETATM 3 O O2 PO4 . . . D 3 -7.013 -21.37 28.493 0.8 47.12 ? O2 PO4 1358 A 1 HETATM 4 O O3 PO4 . . . D 3 -7.903 -23.601 29.157 0.8 36.11 ? O3 PO4 1358 A 1 HETATM 5 O O4 PO4 . . . D 3 -6.898 -22.114 30.846 0.8 46.53 ? O4 PO4 1358 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #