data_3SRZ # _model_server_result.job_id gYKKXPzl4bE3tgAqLPK8aw _model_server_result.datetime_utc '2024-11-04 23:10:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3srz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1542}' # _entry.id 3SRZ # _exptl.entry_id 3SRZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3SRZ _cell.length_a 141.779 _cell.length_b 141.779 _cell.length_c 63.351 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SRZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 287 A ASP 287 1_555 B MN MN . A MN 1542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc2 A OE1 GLU 514 A GLU 514 1_555 B MN MN . A MN 1542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc3 C O1A UPG . A UPG 556 1_555 B MN MN . A MN 1542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc4 C O1B UPG . A UPG 556 1_555 B MN MN . A MN 1542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc5 D O HOH . A HOH 589 1_555 B MN MN . A MN 1542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc6 D O HOH . A HOH 614 1_555 B MN MN . A MN 1542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3SRZ _atom_sites.fract_transf_matrix[1][1] 0.007053 _atom_sites.fract_transf_matrix[1][2] 0.004072 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008144 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015785 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 1542 1542 MN MN . C 3 UPG A 1 556 1 UPG UPG . D 4 HOH A 1 557 1 HOH HOH . D 4 HOH A 2 558 2 HOH HOH . D 4 HOH A 3 559 3 HOH HOH . D 4 HOH A 4 560 4 HOH HOH . D 4 HOH A 5 561 5 HOH HOH . D 4 HOH A 6 562 6 HOH HOH . D 4 HOH A 7 563 7 HOH HOH . D 4 HOH A 8 564 8 HOH HOH . D 4 HOH A 9 565 9 HOH HOH . D 4 HOH A 10 566 10 HOH HOH . D 4 HOH A 11 567 11 HOH HOH . D 4 HOH A 12 568 12 HOH HOH . D 4 HOH A 13 569 13 HOH HOH . D 4 HOH A 14 570 14 HOH HOH . D 4 HOH A 15 571 15 HOH HOH . D 4 HOH A 16 572 16 HOH HOH . D 4 HOH A 17 573 17 HOH HOH . D 4 HOH A 18 574 18 HOH HOH . D 4 HOH A 19 575 19 HOH HOH . D 4 HOH A 20 576 20 HOH HOH . D 4 HOH A 21 577 21 HOH HOH . D 4 HOH A 22 578 22 HOH HOH . D 4 HOH A 23 579 23 HOH HOH . D 4 HOH A 24 580 24 HOH HOH . D 4 HOH A 25 581 25 HOH HOH . D 4 HOH A 26 582 26 HOH HOH . D 4 HOH A 27 583 27 HOH HOH . D 4 HOH A 28 584 28 HOH HOH . D 4 HOH A 29 585 29 HOH HOH . D 4 HOH A 30 586 30 HOH HOH . D 4 HOH A 31 587 31 HOH HOH . D 4 HOH A 32 588 32 HOH HOH . D 4 HOH A 33 589 33 HOH HOH . D 4 HOH A 34 590 34 HOH HOH . D 4 HOH A 35 591 35 HOH HOH . D 4 HOH A 36 592 36 HOH HOH . D 4 HOH A 37 593 37 HOH HOH . D 4 HOH A 38 594 38 HOH HOH . D 4 HOH A 39 595 39 HOH HOH . D 4 HOH A 40 596 40 HOH HOH . D 4 HOH A 41 597 41 HOH HOH . D 4 HOH A 42 598 42 HOH HOH . D 4 HOH A 43 599 43 HOH HOH . D 4 HOH A 44 600 44 HOH HOH . D 4 HOH A 45 601 45 HOH HOH . D 4 HOH A 46 602 46 HOH HOH . D 4 HOH A 47 603 47 HOH HOH . D 4 HOH A 48 604 48 HOH HOH . D 4 HOH A 49 605 49 HOH HOH . D 4 HOH A 50 606 50 HOH HOH . D 4 HOH A 51 607 51 HOH HOH . D 4 HOH A 52 608 52 HOH HOH . D 4 HOH A 53 609 53 HOH HOH . D 4 HOH A 54 610 54 HOH HOH . D 4 HOH A 55 611 55 HOH HOH . D 4 HOH A 56 612 56 HOH HOH . D 4 HOH A 57 613 57 HOH HOH . D 4 HOH A 58 614 58 HOH HOH . D 4 HOH A 59 615 59 HOH HOH . D 4 HOH A 60 616 60 HOH HOH . D 4 HOH A 61 617 61 HOH HOH . D 4 HOH A 62 618 62 HOH HOH . D 4 HOH A 63 619 63 HOH HOH . D 4 HOH A 64 620 64 HOH HOH . D 4 HOH A 65 621 65 HOH HOH . D 4 HOH A 66 622 66 HOH HOH . D 4 HOH A 67 623 67 HOH HOH . D 4 HOH A 68 624 68 HOH HOH . D 4 HOH A 69 625 69 HOH HOH . D 4 HOH A 70 626 70 HOH HOH . D 4 HOH A 71 627 71 HOH HOH . D 4 HOH A 72 628 72 HOH HOH . D 4 HOH A 73 629 73 HOH HOH . D 4 HOH A 74 630 74 HOH HOH . D 4 HOH A 75 631 75 HOH HOH . D 4 HOH A 76 632 76 HOH HOH . D 4 HOH A 77 633 77 HOH HOH . D 4 HOH A 78 634 78 HOH HOH . D 4 HOH A 79 635 79 HOH HOH . D 4 HOH A 80 636 80 HOH HOH . D 4 HOH A 81 637 81 HOH HOH . D 4 HOH A 82 638 82 HOH HOH . D 4 HOH A 83 639 83 HOH HOH . D 4 HOH A 84 640 84 HOH HOH . D 4 HOH A 85 641 85 HOH HOH . D 4 HOH A 86 642 86 HOH HOH . D 4 HOH A 87 643 87 HOH HOH . D 4 HOH A 88 644 88 HOH HOH . D 4 HOH A 89 645 89 HOH HOH . D 4 HOH A 90 646 90 HOH HOH . D 4 HOH A 91 647 91 HOH HOH . D 4 HOH A 92 648 92 HOH HOH . D 4 HOH A 93 649 93 HOH HOH . D 4 HOH A 94 650 94 HOH HOH . D 4 HOH A 95 651 95 HOH HOH . D 4 HOH A 96 652 96 HOH HOH . D 4 HOH A 97 653 97 HOH HOH . D 4 HOH A 98 654 98 HOH HOH . D 4 HOH A 99 655 99 HOH HOH . D 4 HOH A 100 656 100 HOH HOH . D 4 HOH A 101 657 101 HOH HOH . D 4 HOH A 102 658 102 HOH HOH . D 4 HOH A 103 659 103 HOH HOH . D 4 HOH A 104 660 104 HOH HOH . D 4 HOH A 105 661 105 HOH HOH . D 4 HOH A 106 662 106 HOH HOH . D 4 HOH A 107 663 107 HOH HOH . D 4 HOH A 108 664 108 HOH HOH . D 4 HOH A 109 665 109 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -31.252 _atom_site.Cartn_y -40.621 _atom_site.Cartn_z -18.507 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 38.86 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 1542 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #