data_3ST9 # _model_server_result.job_id pEM7bbN0UV5aCFnDYGDZSQ _model_server_result.datetime_utc '2024-12-17 05:37:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3st9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":196}' # _entry.id 3ST9 # _exptl.entry_id 3ST9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3ST9 _cell.length_a 121.289 _cell.length_b 121.289 _cell.length_c 404.377 _cell.Z_PDB 84 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ST9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3ST9 _atom_sites.fract_transf_matrix[1][1] 0.008245 _atom_sites.fract_transf_matrix[1][2] 0.00476 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00952 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002473 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 2 SO4 A 1 196 196 SO4 SO4 . I 3 CA B 1 196 196 CA CA . J 4 GOL C 1 196 196 GOL GOL . K 2 SO4 D 1 196 196 SO4 SO4 . L 5 HOH A 1 197 197 HOH HOH . L 5 HOH A 2 198 198 HOH HOH . L 5 HOH A 3 199 199 HOH HOH . L 5 HOH A 4 200 200 HOH HOH . L 5 HOH A 5 201 201 HOH HOH . L 5 HOH A 6 202 202 HOH HOH . L 5 HOH A 7 203 203 HOH HOH . L 5 HOH A 8 204 204 HOH HOH . L 5 HOH A 9 205 205 HOH HOH . L 5 HOH A 10 206 206 HOH HOH . L 5 HOH A 11 207 207 HOH HOH . L 5 HOH A 12 208 208 HOH HOH . L 5 HOH A 13 209 209 HOH HOH . L 5 HOH A 14 210 210 HOH HOH . L 5 HOH A 15 211 211 HOH HOH . L 5 HOH A 16 212 212 HOH HOH . L 5 HOH A 17 213 213 HOH HOH . L 5 HOH A 18 214 214 HOH HOH . L 5 HOH A 19 215 215 HOH HOH . L 5 HOH A 20 216 216 HOH HOH . L 5 HOH A 21 217 217 HOH HOH . L 5 HOH A 22 218 218 HOH HOH . L 5 HOH A 23 219 219 HOH HOH . L 5 HOH A 24 220 220 HOH HOH . L 5 HOH A 25 221 221 HOH HOH . M 5 HOH B 1 197 197 HOH HOH . M 5 HOH B 2 198 198 HOH HOH . M 5 HOH B 3 199 199 HOH HOH . M 5 HOH B 4 200 200 HOH HOH . M 5 HOH B 5 201 201 HOH HOH . M 5 HOH B 6 202 202 HOH HOH . M 5 HOH B 7 203 203 HOH HOH . M 5 HOH B 8 204 204 HOH HOH . M 5 HOH B 9 205 205 HOH HOH . M 5 HOH B 10 206 206 HOH HOH . M 5 HOH B 11 207 207 HOH HOH . M 5 HOH B 12 208 208 HOH HOH . M 5 HOH B 13 209 209 HOH HOH . M 5 HOH B 14 210 210 HOH HOH . M 5 HOH B 15 211 211 HOH HOH . M 5 HOH B 16 212 212 HOH HOH . M 5 HOH B 17 213 213 HOH HOH . M 5 HOH B 18 214 214 HOH HOH . N 5 HOH C 1 197 197 HOH HOH . N 5 HOH C 2 198 198 HOH HOH . N 5 HOH C 3 199 199 HOH HOH . N 5 HOH C 4 200 200 HOH HOH . N 5 HOH C 5 201 201 HOH HOH . N 5 HOH C 6 202 202 HOH HOH . N 5 HOH C 7 203 203 HOH HOH . N 5 HOH C 8 204 204 HOH HOH . N 5 HOH C 9 205 205 HOH HOH . N 5 HOH C 10 206 206 HOH HOH . N 5 HOH C 11 207 207 HOH HOH . N 5 HOH C 12 208 208 HOH HOH . N 5 HOH C 13 209 209 HOH HOH . N 5 HOH C 14 210 210 HOH HOH . N 5 HOH C 15 211 211 HOH HOH . N 5 HOH C 16 212 212 HOH HOH . N 5 HOH C 17 213 213 HOH HOH . N 5 HOH C 18 214 214 HOH HOH . N 5 HOH C 19 215 215 HOH HOH . N 5 HOH C 20 216 216 HOH HOH . N 5 HOH C 21 217 217 HOH HOH . N 5 HOH C 22 218 218 HOH HOH . N 5 HOH C 23 219 219 HOH HOH . N 5 HOH C 24 220 220 HOH HOH . N 5 HOH C 25 221 221 HOH HOH . N 5 HOH C 26 222 222 HOH HOH . N 5 HOH C 27 223 223 HOH HOH . N 5 HOH C 28 224 224 HOH HOH . N 5 HOH C 29 225 225 HOH HOH . N 5 HOH C 30 226 226 HOH HOH . N 5 HOH C 31 227 227 HOH HOH . N 5 HOH C 32 228 228 HOH HOH . N 5 HOH C 33 229 229 HOH HOH . N 5 HOH C 34 230 230 HOH HOH . N 5 HOH C 35 231 231 HOH HOH . O 5 HOH D 1 197 197 HOH HOH . O 5 HOH D 2 198 198 HOH HOH . O 5 HOH D 3 199 199 HOH HOH . O 5 HOH D 4 200 200 HOH HOH . O 5 HOH D 5 201 201 HOH HOH . O 5 HOH D 6 202 202 HOH HOH . O 5 HOH D 7 203 203 HOH HOH . O 5 HOH D 8 204 204 HOH HOH . O 5 HOH D 9 205 205 HOH HOH . O 5 HOH D 10 206 206 HOH HOH . O 5 HOH D 11 207 207 HOH HOH . O 5 HOH D 12 208 208 HOH HOH . O 5 HOH D 13 209 209 HOH HOH . O 5 HOH D 14 210 210 HOH HOH . O 5 HOH D 15 211 211 HOH HOH . O 5 HOH D 16 212 212 HOH HOH . O 5 HOH D 17 213 213 HOH HOH . P 5 HOH E 1 196 196 HOH HOH . P 5 HOH E 2 197 197 HOH HOH . P 5 HOH E 3 198 198 HOH HOH . P 5 HOH E 4 199 199 HOH HOH . P 5 HOH E 5 200 200 HOH HOH . P 5 HOH E 6 201 201 HOH HOH . P 5 HOH E 7 202 202 HOH HOH . P 5 HOH E 8 203 203 HOH HOH . P 5 HOH E 9 204 204 HOH HOH . P 5 HOH E 10 205 205 HOH HOH . P 5 HOH E 11 206 206 HOH HOH . P 5 HOH E 12 207 207 HOH HOH . P 5 HOH E 13 208 208 HOH HOH . P 5 HOH E 14 209 209 HOH HOH . Q 5 HOH F 1 196 196 HOH HOH . Q 5 HOH F 2 197 197 HOH HOH . Q 5 HOH F 3 198 198 HOH HOH . Q 5 HOH F 4 199 199 HOH HOH . Q 5 HOH F 5 200 200 HOH HOH . Q 5 HOH F 6 201 201 HOH HOH . Q 5 HOH F 7 202 202 HOH HOH . Q 5 HOH F 8 203 203 HOH HOH . Q 5 HOH F 9 204 204 HOH HOH . Q 5 HOH F 10 205 205 HOH HOH . Q 5 HOH F 11 206 206 HOH HOH . Q 5 HOH F 12 207 207 HOH HOH . Q 5 HOH F 13 208 208 HOH HOH . Q 5 HOH F 14 209 209 HOH HOH . Q 5 HOH F 15 210 210 HOH HOH . Q 5 HOH F 16 211 211 HOH HOH . Q 5 HOH F 17 212 212 HOH HOH . Q 5 HOH F 18 213 213 HOH HOH . Q 5 HOH F 19 214 214 HOH HOH . Q 5 HOH F 20 215 215 HOH HOH . Q 5 HOH F 21 216 216 HOH HOH . Q 5 HOH F 22 217 217 HOH HOH . Q 5 HOH F 23 218 218 HOH HOH . Q 5 HOH F 24 219 219 HOH HOH . R 5 HOH G 1 196 196 HOH HOH . R 5 HOH G 2 197 197 HOH HOH . R 5 HOH G 3 198 198 HOH HOH . R 5 HOH G 4 199 199 HOH HOH . R 5 HOH G 5 200 200 HOH HOH . R 5 HOH G 6 201 201 HOH HOH . R 5 HOH G 7 202 202 HOH HOH . R 5 HOH G 8 203 203 HOH HOH . R 5 HOH G 9 204 204 HOH HOH . R 5 HOH G 10 205 205 HOH HOH . R 5 HOH G 11 206 206 HOH HOH . R 5 HOH G 12 207 207 HOH HOH . R 5 HOH G 13 208 208 HOH HOH . R 5 HOH G 14 209 209 HOH HOH . R 5 HOH G 15 210 210 HOH HOH . R 5 HOH G 16 211 211 HOH HOH . R 5 HOH G 17 212 212 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 3 _atom_site.Cartn_x 70.351 _atom_site.Cartn_y 9.076 _atom_site.Cartn_z 14.108 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 85.32 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 196 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 45 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #