data_3STU # _model_server_result.job_id S5cwdHRaMFswxHovQ9lSbA _model_server_result.datetime_utc '2025-04-14 09:36:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3stu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":266}' # _entry.id 3STU # _exptl.entry_id 3STU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 172.265 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DECANOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.51 _cell.angle_gamma 90 _cell.entry_id 3STU _cell.length_a 48.197 _cell.length_b 105.716 _cell.length_c 59.888 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3STU _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H20 O2' _chem_comp.formula_weight 172.265 _chem_comp.id DKA _chem_comp.mon_nstd_flag . _chem_comp.name 'DECANOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 DKA doub 124 n n C1 C2 DKA sing 125 n n C1 O2 DKA sing 126 n n C2 C3 DKA sing 127 n n C2 H21 DKA sing 128 n n C2 H22 DKA sing 129 n n C3 C4 DKA sing 130 n n C3 H31 DKA sing 131 n n C3 H32 DKA sing 132 n n C4 C5 DKA sing 133 n n C4 H41 DKA sing 134 n n C4 H42 DKA sing 135 n n C5 C6 DKA sing 136 n n C5 H51 DKA sing 137 n n C5 H52 DKA sing 138 n n C6 C7 DKA sing 139 n n C6 H61 DKA sing 140 n n C6 H62 DKA sing 141 n n C7 C8 DKA sing 142 n n C7 H71 DKA sing 143 n n C7 H72 DKA sing 144 n n C8 C9 DKA sing 145 n n C8 H81 DKA sing 146 n n C8 H82 DKA sing 147 n n C9 C10 DKA sing 148 n n C9 H91 DKA sing 149 n n C9 H92 DKA sing 150 n n C10 H101 DKA sing 151 n n C10 H102 DKA sing 152 n n C10 H103 DKA sing 153 n n O2 HO2 DKA sing 154 n n # _atom_sites.entry_id 3STU _atom_sites.fract_transf_matrix[1][1] 0.020748 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002368 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009459 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016806 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DKA A 1 266 266 DKA DKA . D 3 DK3 B 1 266 266 DK3 DK3 . E 4 HOH A 1 267 267 HOH HOH . E 4 HOH A 2 268 268 HOH HOH . E 4 HOH A 3 269 269 HOH HOH . E 4 HOH A 4 270 270 HOH HOH . E 4 HOH A 5 271 271 HOH HOH . E 4 HOH A 6 272 272 HOH HOH . E 4 HOH A 7 273 273 HOH HOH . E 4 HOH A 8 274 274 HOH HOH . E 4 HOH A 9 275 275 HOH HOH . E 4 HOH A 10 276 276 HOH HOH . E 4 HOH A 11 277 277 HOH HOH . E 4 HOH A 12 278 278 HOH HOH . E 4 HOH A 13 279 279 HOH HOH . E 4 HOH A 14 280 280 HOH HOH . E 4 HOH A 15 281 281 HOH HOH . E 4 HOH A 16 282 282 HOH HOH . E 4 HOH A 17 283 283 HOH HOH . E 4 HOH A 18 284 284 HOH HOH . E 4 HOH A 19 285 285 HOH HOH . E 4 HOH A 20 286 286 HOH HOH . E 4 HOH A 21 287 287 HOH HOH . E 4 HOH A 22 288 288 HOH HOH . E 4 HOH A 23 289 289 HOH HOH . E 4 HOH A 24 290 290 HOH HOH . E 4 HOH A 25 291 291 HOH HOH . E 4 HOH A 26 292 292 HOH HOH . E 4 HOH A 27 293 293 HOH HOH . E 4 HOH A 28 294 294 HOH HOH . E 4 HOH A 29 295 295 HOH HOH . E 4 HOH A 30 296 296 HOH HOH . E 4 HOH A 31 297 297 HOH HOH . E 4 HOH A 32 298 298 HOH HOH . E 4 HOH A 33 299 299 HOH HOH . E 4 HOH A 34 300 300 HOH HOH . E 4 HOH A 35 301 301 HOH HOH . E 4 HOH A 36 302 302 HOH HOH . E 4 HOH A 37 303 303 HOH HOH . E 4 HOH A 38 304 304 HOH HOH . E 4 HOH A 39 305 305 HOH HOH . E 4 HOH A 40 306 306 HOH HOH . E 4 HOH A 41 307 307 HOH HOH . E 4 HOH A 42 308 308 HOH HOH . E 4 HOH A 43 309 309 HOH HOH . E 4 HOH A 44 310 310 HOH HOH . E 4 HOH A 45 311 311 HOH HOH . E 4 HOH A 46 312 312 HOH HOH . E 4 HOH A 47 313 313 HOH HOH . E 4 HOH A 48 314 314 HOH HOH . E 4 HOH A 49 315 315 HOH HOH . E 4 HOH A 50 316 316 HOH HOH . E 4 HOH A 51 317 317 HOH HOH . E 4 HOH A 52 318 318 HOH HOH . E 4 HOH A 53 319 319 HOH HOH . E 4 HOH A 54 320 320 HOH HOH . E 4 HOH A 55 321 321 HOH HOH . E 4 HOH A 56 322 322 HOH HOH . E 4 HOH A 57 323 323 HOH HOH . E 4 HOH A 58 324 324 HOH HOH . E 4 HOH A 59 325 325 HOH HOH . E 4 HOH A 60 326 326 HOH HOH . E 4 HOH A 61 327 327 HOH HOH . E 4 HOH A 62 328 328 HOH HOH . E 4 HOH A 63 329 329 HOH HOH . E 4 HOH A 64 330 330 HOH HOH . E 4 HOH A 65 331 331 HOH HOH . E 4 HOH A 66 332 332 HOH HOH . E 4 HOH A 67 333 333 HOH HOH . E 4 HOH A 68 334 334 HOH HOH . E 4 HOH A 69 335 335 HOH HOH . E 4 HOH A 70 336 336 HOH HOH . E 4 HOH A 71 337 337 HOH HOH . E 4 HOH A 72 338 338 HOH HOH . E 4 HOH A 73 339 339 HOH HOH . E 4 HOH A 74 340 340 HOH HOH . E 4 HOH A 75 341 341 HOH HOH . E 4 HOH A 76 342 342 HOH HOH . E 4 HOH A 77 343 343 HOH HOH . E 4 HOH A 78 344 344 HOH HOH . E 4 HOH A 79 345 345 HOH HOH . E 4 HOH A 80 346 346 HOH HOH . E 4 HOH A 81 347 347 HOH HOH . E 4 HOH A 82 348 348 HOH HOH . E 4 HOH A 83 349 349 HOH HOH . E 4 HOH A 84 350 350 HOH HOH . E 4 HOH A 85 351 351 HOH HOH . E 4 HOH A 86 352 352 HOH HOH . E 4 HOH A 87 353 353 HOH HOH . E 4 HOH A 88 354 354 HOH HOH . E 4 HOH A 89 355 355 HOH HOH . E 4 HOH A 90 356 356 HOH HOH . E 4 HOH A 91 357 357 HOH HOH . E 4 HOH A 92 358 358 HOH HOH . E 4 HOH A 93 359 359 HOH HOH . E 4 HOH A 94 360 360 HOH HOH . E 4 HOH A 95 361 361 HOH HOH . E 4 HOH A 96 362 362 HOH HOH . E 4 HOH A 97 363 363 HOH HOH . E 4 HOH A 98 364 364 HOH HOH . E 4 HOH A 99 365 365 HOH HOH . E 4 HOH A 100 366 366 HOH HOH . E 4 HOH A 101 367 367 HOH HOH . E 4 HOH A 102 368 368 HOH HOH . E 4 HOH A 103 369 369 HOH HOH . E 4 HOH A 104 370 370 HOH HOH . E 4 HOH A 105 371 371 HOH HOH . E 4 HOH A 106 372 372 HOH HOH . E 4 HOH A 107 373 373 HOH HOH . E 4 HOH A 108 374 374 HOH HOH . E 4 HOH A 109 375 375 HOH HOH . E 4 HOH A 110 376 376 HOH HOH . E 4 HOH A 111 377 377 HOH HOH . E 4 HOH A 112 378 378 HOH HOH . E 4 HOH A 113 379 379 HOH HOH . E 4 HOH A 114 380 380 HOH HOH . E 4 HOH A 115 381 381 HOH HOH . E 4 HOH A 116 382 382 HOH HOH . E 4 HOH A 117 383 383 HOH HOH . E 4 HOH A 118 384 384 HOH HOH . E 4 HOH A 119 385 385 HOH HOH . E 4 HOH A 120 386 386 HOH HOH . E 4 HOH A 121 387 387 HOH HOH . E 4 HOH A 122 388 388 HOH HOH . E 4 HOH A 123 389 389 HOH HOH . F 4 HOH B 1 267 267 HOH HOH . F 4 HOH B 2 268 268 HOH HOH . F 4 HOH B 3 269 269 HOH HOH . F 4 HOH B 4 270 270 HOH HOH . F 4 HOH B 5 271 271 HOH HOH . F 4 HOH B 6 272 272 HOH HOH . F 4 HOH B 7 273 273 HOH HOH . F 4 HOH B 8 274 274 HOH HOH . F 4 HOH B 9 275 275 HOH HOH . F 4 HOH B 10 276 276 HOH HOH . F 4 HOH B 11 277 277 HOH HOH . F 4 HOH B 12 278 278 HOH HOH . F 4 HOH B 13 279 279 HOH HOH . F 4 HOH B 14 280 280 HOH HOH . F 4 HOH B 15 281 281 HOH HOH . F 4 HOH B 16 282 282 HOH HOH . F 4 HOH B 17 283 283 HOH HOH . F 4 HOH B 18 284 284 HOH HOH . F 4 HOH B 19 285 285 HOH HOH . F 4 HOH B 20 286 286 HOH HOH . F 4 HOH B 21 287 287 HOH HOH . F 4 HOH B 22 288 288 HOH HOH . F 4 HOH B 23 289 289 HOH HOH . F 4 HOH B 24 290 290 HOH HOH . F 4 HOH B 25 291 291 HOH HOH . F 4 HOH B 26 292 292 HOH HOH . F 4 HOH B 27 293 293 HOH HOH . F 4 HOH B 28 294 294 HOH HOH . F 4 HOH B 29 295 295 HOH HOH . F 4 HOH B 30 296 296 HOH HOH . F 4 HOH B 31 297 297 HOH HOH . F 4 HOH B 32 298 298 HOH HOH . F 4 HOH B 33 299 299 HOH HOH . F 4 HOH B 34 300 300 HOH HOH . F 4 HOH B 35 301 301 HOH HOH . F 4 HOH B 36 302 302 HOH HOH . F 4 HOH B 37 303 303 HOH HOH . F 4 HOH B 38 304 304 HOH HOH . F 4 HOH B 39 305 305 HOH HOH . F 4 HOH B 40 306 306 HOH HOH . F 4 HOH B 41 307 307 HOH HOH . F 4 HOH B 42 308 308 HOH HOH . F 4 HOH B 43 309 309 HOH HOH . F 4 HOH B 44 310 310 HOH HOH . F 4 HOH B 45 311 311 HOH HOH . F 4 HOH B 46 312 312 HOH HOH . F 4 HOH B 47 313 313 HOH HOH . F 4 HOH B 48 314 314 HOH HOH . F 4 HOH B 49 315 315 HOH HOH . F 4 HOH B 50 316 316 HOH HOH . F 4 HOH B 51 317 317 HOH HOH . F 4 HOH B 52 318 318 HOH HOH . F 4 HOH B 53 319 319 HOH HOH . F 4 HOH B 54 320 320 HOH HOH . F 4 HOH B 55 321 321 HOH HOH . F 4 HOH B 56 322 322 HOH HOH . F 4 HOH B 57 323 323 HOH HOH . F 4 HOH B 58 324 324 HOH HOH . F 4 HOH B 59 325 325 HOH HOH . F 4 HOH B 60 326 326 HOH HOH . F 4 HOH B 61 327 327 HOH HOH . F 4 HOH B 62 328 328 HOH HOH . F 4 HOH B 63 329 329 HOH HOH . F 4 HOH B 64 330 330 HOH HOH . F 4 HOH B 65 331 331 HOH HOH . F 4 HOH B 66 332 332 HOH HOH . F 4 HOH B 67 333 333 HOH HOH . F 4 HOH B 68 334 334 HOH HOH . F 4 HOH B 69 335 335 HOH HOH . F 4 HOH B 70 336 336 HOH HOH . F 4 HOH B 71 337 337 HOH HOH . F 4 HOH B 72 338 338 HOH HOH . F 4 HOH B 73 339 339 HOH HOH . F 4 HOH B 74 340 340 HOH HOH . F 4 HOH B 75 341 341 HOH HOH . F 4 HOH B 76 342 342 HOH HOH . F 4 HOH B 77 343 343 HOH HOH . F 4 HOH B 78 344 344 HOH HOH . F 4 HOH B 79 345 345 HOH HOH . F 4 HOH B 80 346 346 HOH HOH . F 4 HOH B 81 347 347 HOH HOH . F 4 HOH B 82 348 348 HOH HOH . F 4 HOH B 83 349 349 HOH HOH . F 4 HOH B 84 350 350 HOH HOH . F 4 HOH B 85 351 351 HOH HOH . F 4 HOH B 86 352 352 HOH HOH . F 4 HOH B 87 353 353 HOH HOH . F 4 HOH B 88 354 354 HOH HOH . F 4 HOH B 89 355 355 HOH HOH . F 4 HOH B 90 356 356 HOH HOH . F 4 HOH B 91 357 357 HOH HOH . F 4 HOH B 92 358 358 HOH HOH . F 4 HOH B 93 359 359 HOH HOH . F 4 HOH B 94 360 360 HOH HOH . F 4 HOH B 95 361 361 HOH HOH . F 4 HOH B 96 362 362 HOH HOH . F 4 HOH B 97 363 363 HOH HOH . F 4 HOH B 98 364 364 HOH HOH . F 4 HOH B 99 365 365 HOH HOH . F 4 HOH B 100 366 366 HOH HOH . F 4 HOH B 101 367 367 HOH HOH . F 4 HOH B 102 368 368 HOH HOH . F 4 HOH B 103 369 369 HOH HOH . F 4 HOH B 104 370 370 HOH HOH . F 4 HOH B 105 371 371 HOH HOH . F 4 HOH B 106 372 372 HOH HOH . F 4 HOH B 107 373 373 HOH HOH . F 4 HOH B 108 374 374 HOH HOH . F 4 HOH B 109 375 375 HOH HOH . F 4 HOH B 110 376 376 HOH HOH . F 4 HOH B 111 377 377 HOH HOH . F 4 HOH B 112 378 378 HOH HOH . F 4 HOH B 113 379 379 HOH HOH . F 4 HOH B 114 380 380 HOH HOH . F 4 HOH B 115 381 381 HOH HOH . F 4 HOH B 116 382 382 HOH HOH . F 4 HOH B 117 383 383 HOH HOH . F 4 HOH B 118 384 384 HOH HOH . F 4 HOH B 119 385 385 HOH HOH . F 4 HOH B 120 386 386 HOH HOH . F 4 HOH B 121 387 387 HOH HOH . F 4 HOH B 122 388 388 HOH HOH . F 4 HOH B 123 389 389 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DKA . . . C 2 -19.706 -6.976 -27.757 1 62.52 ? C1 DKA 266 A 1 HETATM 2 O O1 DKA . . . C 2 -19.297 -7.915 -28.48 1 62.4 ? O1 DKA 266 A 1 HETATM 3 C C2 DKA . . . C 2 -18.765 -5.837 -27.405 1 62.4 ? C2 DKA 266 A 1 HETATM 4 C C3 DKA . . . C 2 -17.297 -6.187 -27.657 1 62.19 ? C3 DKA 266 A 1 HETATM 5 C C4 DKA . . . C 2 -16.38 -5.005 -27.356 1 62.21 ? C4 DKA 266 A 1 HETATM 6 C C5 DKA . . . C 2 -14.955 -5.477 -27.078 1 62.48 ? C5 DKA 266 A 1 HETATM 7 C C6 DKA . . . C 2 -13.938 -4.346 -27.22 1 62.72 ? C6 DKA 266 A 1 HETATM 8 C C7 DKA . . . C 2 -12.538 -4.795 -26.805 1 62.64 ? C7 DKA 266 A 1 HETATM 9 C C8 DKA . . . C 2 -11.693 -5.172 -28.02 1 62.52 ? C8 DKA 266 A 1 HETATM 10 C C9 DKA . . . C 2 -10.236 -5.413 -27.641 1 62.4 ? C9 DKA 266 A 1 HETATM 11 C C10 DKA . . . C 2 -9.295 -4.797 -28.656 1 62.2 ? C10 DKA 266 A 1 HETATM 12 O O2 DKA . . . C 2 -20.878 -6.937 -27.308 1 62.33 ? O2 DKA 266 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 12 #