data_3STW # _model_server_result.job_id Wz9PgJ0eq7ywU9-UrJLvGA _model_server_result.datetime_utc '2024-11-05 04:26:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3stw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":266}' # _entry.id 3STW # _exptl.entry_id 3STW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 196.329 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description tridec-12-en-2-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.52 _cell.angle_gamma 90 _cell.entry_id 3STW _cell.length_a 48.532 _cell.length_b 106.915 _cell.length_c 60.097 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3STW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C13 H24 O' _chem_comp.formula_weight 196.329 _chem_comp.id 2TD _chem_comp.mon_nstd_flag . _chem_comp.name tridec-12-en-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 2TD doub 1 n n C1 C2 2TD sing 2 n n C2 C3 2TD sing 3 n n C1 H1 2TD sing 4 n n C1 H1A 2TD sing 5 n n C1 H1B 2TD sing 6 n n C3 C4 2TD sing 7 n n C3 H3 2TD sing 8 n n C3 H3A 2TD sing 9 n n C4 C5 2TD sing 10 n n C4 H4 2TD sing 11 n n C4 H4A 2TD sing 12 n n C5 C6 2TD sing 13 n n C5 H5 2TD sing 14 n n C5 H5A 2TD sing 15 n n C6 C7 2TD sing 16 n n C6 H6 2TD sing 17 n n C6 H6A 2TD sing 18 n n C7 C8 2TD sing 19 n n C7 H7 2TD sing 20 n n C7 H7A 2TD sing 21 n n C8 C9 2TD sing 22 n n C8 H8 2TD sing 23 n n C8 H8A 2TD sing 24 n n C9 C10 2TD sing 25 n n C9 H9 2TD sing 26 n n C9 H9A 2TD sing 27 n n C10 C11 2TD sing 28 n n C10 H10 2TD sing 29 n n C10 H10A 2TD sing 30 n n C11 C12 2TD sing 31 n n C11 H11 2TD sing 32 n n C11 H11A 2TD sing 33 n n C12 C13 2TD doub 34 n n C12 H12 2TD sing 35 n n C13 H13 2TD sing 36 n n C13 H13A 2TD sing 37 n n # _atom_sites.entry_id 3STW _atom_sites.fract_transf_matrix[1][1] 0.020605 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002355 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009353 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016748 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2TD A 1 266 2 2TD 2TD . D 2 2TD B 1 266 1 2TD 2TD . E 3 HOH A 1 267 1 HOH TIP . E 3 HOH A 2 268 2 HOH TIP . E 3 HOH A 3 269 6 HOH TIP . E 3 HOH A 4 270 7 HOH TIP . E 3 HOH A 5 271 10 HOH TIP . E 3 HOH A 6 272 12 HOH TIP . E 3 HOH A 7 273 13 HOH TIP . E 3 HOH A 8 274 14 HOH TIP . E 3 HOH A 9 275 15 HOH TIP . E 3 HOH A 10 276 19 HOH TIP . E 3 HOH A 11 277 20 HOH TIP . E 3 HOH A 12 278 21 HOH TIP . E 3 HOH A 13 279 22 HOH TIP . E 3 HOH A 14 280 24 HOH TIP . E 3 HOH A 15 281 25 HOH TIP . E 3 HOH A 16 282 26 HOH TIP . E 3 HOH A 17 283 30 HOH TIP . E 3 HOH A 18 284 32 HOH TIP . E 3 HOH A 19 285 35 HOH TIP . E 3 HOH A 20 286 37 HOH TIP . E 3 HOH A 21 287 38 HOH TIP . E 3 HOH A 22 288 39 HOH TIP . E 3 HOH A 23 289 41 HOH TIP . E 3 HOH A 24 290 44 HOH TIP . E 3 HOH A 25 291 46 HOH TIP . E 3 HOH A 26 292 47 HOH TIP . E 3 HOH A 27 293 51 HOH TIP . E 3 HOH A 28 294 52 HOH TIP . E 3 HOH A 29 295 54 HOH TIP . E 3 HOH A 30 296 55 HOH TIP . E 3 HOH A 31 297 57 HOH TIP . E 3 HOH A 32 298 60 HOH TIP . E 3 HOH A 33 299 61 HOH TIP . E 3 HOH A 34 300 65 HOH TIP . E 3 HOH A 35 301 68 HOH TIP . E 3 HOH A 36 302 69 HOH TIP . E 3 HOH A 37 303 73 HOH TIP . E 3 HOH A 38 304 74 HOH TIP . E 3 HOH A 39 305 76 HOH TIP . E 3 HOH A 40 306 77 HOH TIP . E 3 HOH A 41 307 79 HOH TIP . E 3 HOH A 42 308 82 HOH TIP . E 3 HOH A 43 309 87 HOH TIP . E 3 HOH A 44 310 89 HOH TIP . E 3 HOH A 45 311 91 HOH TIP . E 3 HOH A 46 312 92 HOH TIP . E 3 HOH A 47 313 93 HOH TIP . E 3 HOH A 48 314 97 HOH TIP . E 3 HOH A 49 315 101 HOH TIP . E 3 HOH A 50 316 104 HOH TIP . E 3 HOH A 51 317 105 HOH TIP . E 3 HOH A 52 318 108 HOH TIP . E 3 HOH A 53 319 109 HOH TIP . E 3 HOH A 54 320 111 HOH TIP . E 3 HOH A 55 321 112 HOH TIP . E 3 HOH A 56 322 118 HOH TIP . E 3 HOH A 57 323 120 HOH TIP . E 3 HOH A 58 324 124 HOH TIP . E 3 HOH A 59 325 126 HOH TIP . E 3 HOH A 60 326 128 HOH TIP . E 3 HOH A 61 327 129 HOH TIP . E 3 HOH A 62 328 130 HOH TIP . E 3 HOH A 63 329 132 HOH TIP . E 3 HOH A 64 330 133 HOH TIP . E 3 HOH A 65 331 134 HOH TIP . E 3 HOH A 66 332 135 HOH TIP . E 3 HOH A 67 333 136 HOH TIP . E 3 HOH A 68 334 137 HOH TIP . E 3 HOH A 69 335 141 HOH TIP . E 3 HOH A 70 336 144 HOH TIP . E 3 HOH A 71 337 148 HOH TIP . E 3 HOH A 72 338 149 HOH TIP . E 3 HOH A 73 339 150 HOH TIP . E 3 HOH A 74 340 151 HOH TIP . E 3 HOH A 75 341 152 HOH TIP . E 3 HOH A 76 342 154 HOH TIP . E 3 HOH A 77 343 155 HOH TIP . E 3 HOH A 78 344 156 HOH TIP . E 3 HOH A 79 345 157 HOH TIP . E 3 HOH A 80 346 158 HOH TIP . E 3 HOH A 81 347 159 HOH TIP . E 3 HOH A 82 348 160 HOH TIP . E 3 HOH A 83 349 161 HOH TIP . E 3 HOH A 84 350 162 HOH TIP . E 3 HOH A 85 351 163 HOH TIP . E 3 HOH A 86 352 166 HOH TIP . E 3 HOH A 87 353 167 HOH TIP . E 3 HOH A 88 354 175 HOH TIP . E 3 HOH A 89 355 176 HOH TIP . E 3 HOH A 90 356 177 HOH TIP . E 3 HOH A 91 357 184 HOH TIP . E 3 HOH A 92 358 185 HOH TIP . E 3 HOH A 93 359 186 HOH TIP . E 3 HOH A 94 360 188 HOH TIP . E 3 HOH A 95 361 189 HOH TIP . E 3 HOH A 96 362 191 HOH TIP . E 3 HOH A 97 363 192 HOH TIP . E 3 HOH A 98 364 193 HOH TIP . E 3 HOH A 99 365 206 HOH TIP . E 3 HOH A 100 366 207 HOH TIP . E 3 HOH A 101 367 209 HOH TIP . E 3 HOH A 102 368 210 HOH TIP . E 3 HOH A 103 369 211 HOH TIP . E 3 HOH A 104 370 212 HOH TIP . E 3 HOH A 105 371 215 HOH TIP . E 3 HOH A 106 372 216 HOH TIP . E 3 HOH A 107 373 217 HOH TIP . E 3 HOH A 108 374 218 HOH TIP . E 3 HOH A 109 375 219 HOH TIP . E 3 HOH A 110 376 220 HOH TIP . E 3 HOH A 111 377 221 HOH TIP . F 3 HOH B 1 267 3 HOH TIP . F 3 HOH B 2 268 4 HOH TIP . F 3 HOH B 3 269 5 HOH TIP . F 3 HOH B 4 270 8 HOH TIP . F 3 HOH B 5 271 9 HOH TIP . F 3 HOH B 6 272 11 HOH TIP . F 3 HOH B 7 273 16 HOH TIP . F 3 HOH B 8 274 17 HOH TIP . F 3 HOH B 9 275 18 HOH TIP . F 3 HOH B 10 276 23 HOH TIP . F 3 HOH B 11 277 27 HOH TIP . F 3 HOH B 12 278 28 HOH TIP . F 3 HOH B 13 279 29 HOH TIP . F 3 HOH B 14 280 31 HOH TIP . F 3 HOH B 15 281 33 HOH TIP . F 3 HOH B 16 282 34 HOH TIP . F 3 HOH B 17 283 36 HOH TIP . F 3 HOH B 18 284 40 HOH TIP . F 3 HOH B 19 285 42 HOH TIP . F 3 HOH B 20 286 43 HOH TIP . F 3 HOH B 21 287 45 HOH TIP . F 3 HOH B 22 288 48 HOH TIP . F 3 HOH B 23 289 49 HOH TIP . F 3 HOH B 24 290 50 HOH TIP . F 3 HOH B 25 291 53 HOH TIP . F 3 HOH B 26 292 56 HOH TIP . F 3 HOH B 27 293 58 HOH TIP . F 3 HOH B 28 294 59 HOH TIP . F 3 HOH B 29 295 62 HOH TIP . F 3 HOH B 30 296 63 HOH TIP . F 3 HOH B 31 297 64 HOH TIP . F 3 HOH B 32 298 66 HOH TIP . F 3 HOH B 33 299 67 HOH TIP . F 3 HOH B 34 300 70 HOH TIP . F 3 HOH B 35 301 71 HOH TIP . F 3 HOH B 36 302 72 HOH TIP . F 3 HOH B 37 303 75 HOH TIP . F 3 HOH B 38 304 78 HOH TIP . F 3 HOH B 39 305 80 HOH TIP . F 3 HOH B 40 306 81 HOH TIP . F 3 HOH B 41 307 83 HOH TIP . F 3 HOH B 42 308 84 HOH TIP . F 3 HOH B 43 309 85 HOH TIP . F 3 HOH B 44 310 86 HOH TIP . F 3 HOH B 45 311 88 HOH TIP . F 3 HOH B 46 312 90 HOH TIP . F 3 HOH B 47 313 94 HOH TIP . F 3 HOH B 48 314 95 HOH TIP . F 3 HOH B 49 315 96 HOH TIP . F 3 HOH B 50 316 98 HOH TIP . F 3 HOH B 51 317 99 HOH TIP . F 3 HOH B 52 318 100 HOH TIP . F 3 HOH B 53 319 102 HOH TIP . F 3 HOH B 54 320 103 HOH TIP . F 3 HOH B 55 321 106 HOH TIP . F 3 HOH B 56 322 107 HOH TIP . F 3 HOH B 57 323 110 HOH TIP . F 3 HOH B 58 324 113 HOH TIP . F 3 HOH B 59 325 114 HOH TIP . F 3 HOH B 60 326 115 HOH TIP . F 3 HOH B 61 327 116 HOH TIP . F 3 HOH B 62 328 117 HOH TIP . F 3 HOH B 63 329 119 HOH TIP . F 3 HOH B 64 330 121 HOH TIP . F 3 HOH B 65 331 122 HOH TIP . F 3 HOH B 66 332 123 HOH TIP . F 3 HOH B 67 333 125 HOH TIP . F 3 HOH B 68 334 127 HOH TIP . F 3 HOH B 69 335 131 HOH TIP . F 3 HOH B 70 336 138 HOH TIP . F 3 HOH B 71 337 139 HOH TIP . F 3 HOH B 72 338 140 HOH TIP . F 3 HOH B 73 339 142 HOH TIP . F 3 HOH B 74 340 143 HOH TIP . F 3 HOH B 75 341 145 HOH TIP . F 3 HOH B 76 342 146 HOH TIP . F 3 HOH B 77 343 147 HOH TIP . F 3 HOH B 78 344 153 HOH TIP . F 3 HOH B 79 345 164 HOH TIP . F 3 HOH B 80 346 165 HOH TIP . F 3 HOH B 81 347 168 HOH TIP . F 3 HOH B 82 348 169 HOH TIP . F 3 HOH B 83 349 170 HOH TIP . F 3 HOH B 84 350 171 HOH TIP . F 3 HOH B 85 351 172 HOH TIP . F 3 HOH B 86 352 173 HOH TIP . F 3 HOH B 87 353 174 HOH TIP . F 3 HOH B 88 354 178 HOH TIP . F 3 HOH B 89 355 179 HOH TIP . F 3 HOH B 90 356 180 HOH TIP . F 3 HOH B 91 357 181 HOH TIP . F 3 HOH B 92 358 182 HOH TIP . F 3 HOH B 93 359 183 HOH TIP . F 3 HOH B 94 360 187 HOH TIP . F 3 HOH B 95 361 190 HOH TIP . F 3 HOH B 96 362 194 HOH TIP . F 3 HOH B 97 363 195 HOH TIP . F 3 HOH B 98 364 196 HOH TIP . F 3 HOH B 99 365 197 HOH TIP . F 3 HOH B 100 366 198 HOH TIP . F 3 HOH B 101 367 199 HOH TIP . F 3 HOH B 102 368 200 HOH TIP . F 3 HOH B 103 369 201 HOH TIP . F 3 HOH B 104 370 202 HOH TIP . F 3 HOH B 105 371 203 HOH TIP . F 3 HOH B 106 372 204 HOH TIP . F 3 HOH B 107 373 205 HOH TIP . F 3 HOH B 108 374 208 HOH TIP . F 3 HOH B 109 375 213 HOH TIP . F 3 HOH B 110 376 214 HOH TIP . F 3 HOH B 111 377 222 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 2TD . . . D 2 -37.427 -3.896 2.57 1 26.04 ? O1 2TD 266 B 1 HETATM 2 C C2 2TD . . . D 2 -37.24 -4.699 3.379 1 27.59 ? C2 2TD 266 B 1 HETATM 3 C C1 2TD . . . D 2 -36.96 -6.04 2.876 1 31.2 ? C1 2TD 266 B 1 HETATM 4 C C3 2TD . . . D 2 -37.29 -4.352 4.847 1 34.2 ? C3 2TD 266 B 1 HETATM 5 C C4 2TD . . . D 2 -36.985 -2.88 5.162 1 35.28 ? C4 2TD 266 B 1 HETATM 6 C C5 2TD . . . D 2 -36.594 -2.614 6.587 1 35.8 ? C5 2TD 266 B 1 HETATM 7 C C6 2TD . . . D 2 -35.095 -2.658 6.869 1 38.19 ? C6 2TD 266 B 1 HETATM 8 C C7 2TD . . . D 2 -34.813 -2.367 8.356 1 41.65 ? C7 2TD 266 B 1 HETATM 9 C C8 2TD . . . D 2 -33.404 -2.624 8.895 1 44.29 ? C8 2TD 266 B 1 HETATM 10 C C9 2TD . . . D 2 -32.616 -1.344 9.119 1 44.25 ? C9 2TD 266 B 1 HETATM 11 C C10 2TD . . . D 2 -31.214 -1.595 9.656 1 45.47 ? C10 2TD 266 B 1 HETATM 12 C C11 2TD . . . D 2 -30.734 -0.543 10.663 1 46.51 ? C11 2TD 266 B 1 HETATM 13 C C12 2TD . . . D 2 -30.514 -1.174 12.043 1 47.61 ? C12 2TD 266 B 1 HETATM 14 C C13 2TD . . . D 2 -31.304 -0.629 13.243 1 46.97 ? C13 2TD 266 B 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 232 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #