data_3STX # _model_server_result.job_id 6HeCmVtns7YoeqY1pNzm6g _model_server_result.datetime_utc '2024-11-04 22:56:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3stx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":266}' # _entry.id 3STX # _exptl.entry_id 3STX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 144.168 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-oxoheptanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.59 _cell.angle_gamma 90 _cell.entry_id 3STX _cell.length_a 48.237 _cell.length_b 94.387 _cell.length_c 60.077 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3STX _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C7 H12 O3' _chem_comp.formula_weight 144.168 _chem_comp.id BKA _chem_comp.mon_nstd_flag . _chem_comp.name '3-oxoheptanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C3 BKA doub 70 n n C4 C3 BKA sing 71 n n C3 C2 BKA sing 72 n n C2 C1 BKA sing 73 n n C2 H2 BKA sing 74 n n C2 H2A BKA sing 75 n n C1 O1 BKA doub 76 n n C1 O2 BKA sing 77 n n O2 HO2 BKA sing 78 n n C4 C5 BKA sing 79 n n C4 H4 BKA sing 80 n n C4 H4A BKA sing 81 n n C6 C5 BKA sing 82 n n C5 H5 BKA sing 83 n n C5 H5A BKA sing 84 n n C6 C7 BKA sing 85 n n C6 H6 BKA sing 86 n n C6 H6A BKA sing 87 n n C7 H7 BKA sing 88 n n C7 H7A BKA sing 89 n n C7 H7B BKA sing 90 n n # _atom_sites.entry_id 3STX _atom_sites.fract_transf_matrix[1][1] 0.020731 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002764 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010595 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016793 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BKA A 1 266 1 BKA BKA . D 2 BKA B 1 266 2 BKA BKA . E 3 HOH A 1 267 1 HOH HOH . E 3 HOH A 2 268 3 HOH HOH . E 3 HOH A 3 269 5 HOH HOH . E 3 HOH A 4 270 8 HOH HOH . E 3 HOH A 5 271 9 HOH HOH . E 3 HOH A 6 272 12 HOH HOH . E 3 HOH A 7 273 15 HOH HOH . E 3 HOH A 8 274 16 HOH HOH . E 3 HOH A 9 275 18 HOH HOH . E 3 HOH A 10 276 19 HOH HOH . E 3 HOH A 11 277 20 HOH HOH . E 3 HOH A 12 278 22 HOH HOH . E 3 HOH A 13 279 25 HOH HOH . E 3 HOH A 14 280 26 HOH HOH . E 3 HOH A 15 281 28 HOH HOH . E 3 HOH A 16 282 29 HOH HOH . E 3 HOH A 17 283 30 HOH HOH . E 3 HOH A 18 284 33 HOH HOH . E 3 HOH A 19 285 35 HOH HOH . E 3 HOH A 20 286 36 HOH HOH . E 3 HOH A 21 287 38 HOH HOH . E 3 HOH A 22 288 41 HOH HOH . E 3 HOH A 23 289 45 HOH HOH . E 3 HOH A 24 290 46 HOH HOH . E 3 HOH A 25 291 49 HOH HOH . E 3 HOH A 26 292 51 HOH HOH . E 3 HOH A 27 293 52 HOH HOH . E 3 HOH A 28 294 54 HOH HOH . E 3 HOH A 29 295 56 HOH HOH . E 3 HOH A 30 296 57 HOH HOH . E 3 HOH A 31 297 61 HOH HOH . E 3 HOH A 32 298 62 HOH HOH . E 3 HOH A 33 299 65 HOH HOH . E 3 HOH A 34 300 66 HOH HOH . E 3 HOH A 35 301 67 HOH HOH . E 3 HOH A 36 302 68 HOH HOH . E 3 HOH A 37 303 70 HOH HOH . E 3 HOH A 38 304 73 HOH HOH . E 3 HOH A 39 305 77 HOH HOH . E 3 HOH A 40 306 83 HOH HOH . E 3 HOH A 41 307 85 HOH HOH . E 3 HOH A 42 308 86 HOH HOH . E 3 HOH A 43 309 89 HOH HOH . E 3 HOH A 44 310 93 HOH HOH . E 3 HOH A 45 311 94 HOH HOH . E 3 HOH A 46 312 95 HOH HOH . E 3 HOH A 47 313 96 HOH HOH . E 3 HOH A 48 314 98 HOH HOH . E 3 HOH A 49 315 99 HOH HOH . E 3 HOH A 50 316 100 HOH HOH . E 3 HOH A 51 317 101 HOH HOH . E 3 HOH A 52 318 105 HOH HOH . E 3 HOH A 53 319 106 HOH HOH . E 3 HOH A 54 320 108 HOH HOH . E 3 HOH A 55 321 110 HOH HOH . E 3 HOH A 56 322 111 HOH HOH . E 3 HOH A 57 323 114 HOH HOH . E 3 HOH A 58 324 115 HOH HOH . E 3 HOH A 59 325 116 HOH HOH . E 3 HOH A 60 326 117 HOH HOH . E 3 HOH A 61 327 118 HOH HOH . E 3 HOH A 62 328 119 HOH HOH . E 3 HOH A 63 329 120 HOH HOH . E 3 HOH A 64 330 121 HOH HOH . E 3 HOH A 65 331 125 HOH HOH . E 3 HOH A 66 332 130 HOH HOH . E 3 HOH A 67 333 136 HOH HOH . E 3 HOH A 68 334 137 HOH HOH . E 3 HOH A 69 335 138 HOH HOH . E 3 HOH A 70 336 139 HOH HOH . E 3 HOH A 71 337 140 HOH HOH . E 3 HOH A 72 338 141 HOH HOH . E 3 HOH A 73 339 149 HOH HOH . E 3 HOH A 74 340 150 HOH HOH . E 3 HOH A 75 341 151 HOH HOH . E 3 HOH A 76 342 152 HOH HOH . E 3 HOH A 77 343 155 HOH HOH . E 3 HOH A 78 344 156 HOH HOH . E 3 HOH A 79 345 157 HOH HOH . E 3 HOH A 80 346 160 HOH HOH . F 3 HOH B 1 267 2 HOH HOH . F 3 HOH B 2 268 4 HOH HOH . F 3 HOH B 3 269 6 HOH HOH . F 3 HOH B 4 270 7 HOH HOH . F 3 HOH B 5 271 10 HOH HOH . F 3 HOH B 6 272 11 HOH HOH . F 3 HOH B 7 273 13 HOH HOH . F 3 HOH B 8 274 14 HOH HOH . F 3 HOH B 9 275 17 HOH HOH . F 3 HOH B 10 276 21 HOH HOH . F 3 HOH B 11 277 23 HOH HOH . F 3 HOH B 12 278 24 HOH HOH . F 3 HOH B 13 279 27 HOH HOH . F 3 HOH B 14 280 31 HOH HOH . F 3 HOH B 15 281 32 HOH HOH . F 3 HOH B 16 282 34 HOH HOH . F 3 HOH B 17 283 37 HOH HOH . F 3 HOH B 18 284 39 HOH HOH . F 3 HOH B 19 285 40 HOH HOH . F 3 HOH B 20 286 42 HOH HOH . F 3 HOH B 21 287 43 HOH HOH . F 3 HOH B 22 288 44 HOH HOH . F 3 HOH B 23 289 47 HOH HOH . F 3 HOH B 24 290 48 HOH HOH . F 3 HOH B 25 291 50 HOH HOH . F 3 HOH B 26 292 53 HOH HOH . F 3 HOH B 27 293 55 HOH HOH . F 3 HOH B 28 294 58 HOH HOH . F 3 HOH B 29 295 59 HOH HOH . F 3 HOH B 30 296 60 HOH HOH . F 3 HOH B 31 297 63 HOH HOH . F 3 HOH B 32 298 64 HOH HOH . F 3 HOH B 33 299 69 HOH HOH . F 3 HOH B 34 300 71 HOH HOH . F 3 HOH B 35 301 72 HOH HOH . F 3 HOH B 36 302 74 HOH HOH . F 3 HOH B 37 303 75 HOH HOH . F 3 HOH B 38 304 76 HOH HOH . F 3 HOH B 39 305 78 HOH HOH . F 3 HOH B 40 306 79 HOH HOH . F 3 HOH B 41 307 80 HOH HOH . F 3 HOH B 42 308 81 HOH HOH . F 3 HOH B 43 309 82 HOH HOH . F 3 HOH B 44 310 84 HOH HOH . F 3 HOH B 45 311 87 HOH HOH . F 3 HOH B 46 312 88 HOH HOH . F 3 HOH B 47 313 90 HOH HOH . F 3 HOH B 48 314 91 HOH HOH . F 3 HOH B 49 315 92 HOH HOH . F 3 HOH B 50 316 97 HOH HOH . F 3 HOH B 51 317 102 HOH HOH . F 3 HOH B 52 318 103 HOH HOH . F 3 HOH B 53 319 104 HOH HOH . F 3 HOH B 54 320 107 HOH HOH . F 3 HOH B 55 321 109 HOH HOH . F 3 HOH B 56 322 112 HOH HOH . F 3 HOH B 57 323 113 HOH HOH . F 3 HOH B 58 324 122 HOH HOH . F 3 HOH B 59 325 123 HOH HOH . F 3 HOH B 60 326 124 HOH HOH . F 3 HOH B 61 327 126 HOH HOH . F 3 HOH B 62 328 127 HOH HOH . F 3 HOH B 63 329 128 HOH HOH . F 3 HOH B 64 330 129 HOH HOH . F 3 HOH B 65 331 131 HOH HOH . F 3 HOH B 66 332 132 HOH HOH . F 3 HOH B 67 333 133 HOH HOH . F 3 HOH B 68 334 134 HOH HOH . F 3 HOH B 69 335 135 HOH HOH . F 3 HOH B 70 336 142 HOH HOH . F 3 HOH B 71 337 143 HOH HOH . F 3 HOH B 72 338 144 HOH HOH . F 3 HOH B 73 339 145 HOH HOH . F 3 HOH B 74 340 146 HOH HOH . F 3 HOH B 75 341 147 HOH HOH . F 3 HOH B 76 342 148 HOH HOH . F 3 HOH B 77 343 153 HOH HOH . F 3 HOH B 78 344 154 HOH HOH . F 3 HOH B 79 345 158 HOH HOH . F 3 HOH B 80 346 159 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 BKA . . . C 2 18.005 -7.618 -0.175 1 40.26 ? O3 BKA 266 A 1 HETATM 2 C C3 BKA . . . C 2 18.229 -6.428 -0.006 1 40.25 ? C3 BKA 266 A 1 HETATM 3 C C2 BKA . . . C 2 17.092 -5.448 0.23 1 40.95 ? C2 BKA 266 A 1 HETATM 4 C C1 BKA . . . C 2 15.938 -5.945 1.08 1 41.62 ? C1 BKA 266 A 1 HETATM 5 O O1 BKA . . . C 2 15.835 -7.16 1.366 1 41.36 ? O1 BKA 266 A 1 HETATM 6 O O2 BKA . . . C 2 15.109 -5.087 1.469 1 42.12 ? O2 BKA 266 A 1 HETATM 7 C C4 BKA . . . C 2 19.663 -5.928 -0.088 1 38.81 ? C4 BKA 266 A 1 HETATM 8 C C5 BKA . . . C 2 20.174 -5.282 1.199 1 37.12 ? C5 BKA 266 A 1 HETATM 9 C C6 BKA . . . C 2 21.261 -4.247 0.914 1 35.72 ? C6 BKA 266 A 1 HETATM 10 C C7 BKA . . . C 2 22.655 -4.793 1.152 1 34.93 ? C7 BKA 266 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #