data_3SV5
#
_model_server_result.job_id            AEM467bNRLVZTLAwtG9OBg 
_model_server_result.datetime_utc      '2024-10-18 16:22:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3sv5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":262}' 
#
_entry.id    3SV5 
#
_exptl.entry_id    3SV5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              126.904 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IODIDE ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3SV5 
_cell.length_a            51.488 
_cell.length_b            63.025 
_cell.length_c            66.07 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3SV5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 F N N 
? 3 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C PHE 65 A PHE 64 1_555 A N1 CR2 66 A CR2 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? 
covale ? covale2 A C3 CR2 66 A CR2 66 1_555 A N VAL 67 A VAL 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.309 ? 
#
_chem_comp.formula           'I -1' 
_chem_comp.formula_weight    126.904 
_chem_comp.id                IOD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IODIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3SV5 
_atom_sites.fract_transf_matrix[1][1]    0.019422 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015867 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015135 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 260 260 EDO EDO . 
C 3 IOD A 1 261 261 IOD IOD . 
D 3 IOD A 1 262 262 IOD IOD . 
E 4 FMT A 1 263 263 FMT FMT . 
F 3 IOD A 1 264 264 IOD IOD . 
G 3 IOD A 1 265 265 IOD IOD . 
H 5 HOH A 1 266 266 HOH HOH . 
H 5 HOH A 2 267 267 HOH HOH . 
H 5 HOH A 3 268 268 HOH HOH . 
H 5 HOH A 4 269 269 HOH HOH . 
H 5 HOH A 5 270 270 HOH HOH . 
H 5 HOH A 6 271 271 HOH HOH . 
H 5 HOH A 7 272 272 HOH HOH . 
H 5 HOH A 8 273 273 HOH HOH . 
H 5 HOH A 9 274 274 HOH HOH . 
H 5 HOH A 10 275 275 HOH HOH . 
H 5 HOH A 11 276 276 HOH HOH . 
H 5 HOH A 12 277 277 HOH HOH . 
H 5 HOH A 13 278 278 HOH HOH . 
H 5 HOH A 14 279 279 HOH HOH . 
H 5 HOH A 15 280 280 HOH HOH . 
H 5 HOH A 16 281 281 HOH HOH . 
H 5 HOH A 17 282 282 HOH HOH . 
H 5 HOH A 18 283 283 HOH HOH . 
H 5 HOH A 19 284 284 HOH HOH . 
H 5 HOH A 20 285 285 HOH HOH . 
H 5 HOH A 21 286 286 HOH HOH . 
H 5 HOH A 22 287 287 HOH HOH . 
H 5 HOH A 23 288 288 HOH HOH . 
H 5 HOH A 24 289 289 HOH HOH . 
H 5 HOH A 25 290 290 HOH HOH . 
H 5 HOH A 26 291 291 HOH HOH . 
H 5 HOH A 27 292 292 HOH HOH . 
H 5 HOH A 28 293 293 HOH HOH . 
H 5 HOH A 29 294 294 HOH HOH . 
H 5 HOH A 30 295 295 HOH HOH . 
H 5 HOH A 31 296 296 HOH HOH . 
H 5 HOH A 32 297 297 HOH HOH . 
H 5 HOH A 33 298 298 HOH HOH . 
H 5 HOH A 34 299 299 HOH HOH . 
H 5 HOH A 35 300 300 HOH HOH . 
H 5 HOH A 36 301 301 HOH HOH . 
H 5 HOH A 37 302 302 HOH HOH . 
H 5 HOH A 38 303 303 HOH HOH . 
H 5 HOH A 39 304 304 HOH HOH . 
H 5 HOH A 40 305 305 HOH HOH . 
H 5 HOH A 41 306 306 HOH HOH . 
H 5 HOH A 42 307 307 HOH HOH . 
H 5 HOH A 43 308 308 HOH HOH . 
H 5 HOH A 44 309 309 HOH HOH . 
H 5 HOH A 45 310 310 HOH HOH . 
H 5 HOH A 46 311 311 HOH HOH . 
H 5 HOH A 47 312 312 HOH HOH . 
H 5 HOH A 48 313 313 HOH HOH . 
H 5 HOH A 49 314 314 HOH HOH . 
H 5 HOH A 50 315 315 HOH HOH . 
H 5 HOH A 51 316 316 HOH HOH . 
H 5 HOH A 52 317 317 HOH HOH . 
H 5 HOH A 53 318 318 HOH HOH . 
H 5 HOH A 54 319 319 HOH HOH . 
H 5 HOH A 55 320 320 HOH HOH . 
H 5 HOH A 56 321 321 HOH HOH . 
H 5 HOH A 57 322 322 HOH HOH . 
H 5 HOH A 58 323 323 HOH HOH . 
H 5 HOH A 59 324 324 HOH HOH . 
H 5 HOH A 60 325 325 HOH HOH . 
H 5 HOH A 61 326 326 HOH HOH . 
H 5 HOH A 62 327 327 HOH HOH . 
H 5 HOH A 63 328 328 HOH HOH . 
H 5 HOH A 64 329 329 HOH HOH . 
H 5 HOH A 65 330 330 HOH HOH . 
H 5 HOH A 66 331 331 HOH HOH . 
H 5 HOH A 67 332 332 HOH HOH . 
H 5 HOH A 68 333 333 HOH HOH . 
H 5 HOH A 69 334 334 HOH HOH . 
H 5 HOH A 70 335 335 HOH HOH . 
H 5 HOH A 71 336 336 HOH HOH . 
H 5 HOH A 72 337 337 HOH HOH . 
H 5 HOH A 73 338 338 HOH HOH . 
H 5 HOH A 74 339 339 HOH HOH . 
H 5 HOH A 75 340 340 HOH HOH . 
H 5 HOH A 76 341 341 HOH HOH . 
H 5 HOH A 77 342 342 HOH HOH . 
H 5 HOH A 78 343 343 HOH HOH . 
H 5 HOH A 79 344 344 HOH HOH . 
H 5 HOH A 80 345 345 HOH HOH . 
H 5 HOH A 81 346 346 HOH HOH . 
H 5 HOH A 82 347 347 HOH HOH . 
H 5 HOH A 83 348 348 HOH HOH . 
H 5 HOH A 84 349 349 HOH HOH . 
H 5 HOH A 85 350 350 HOH HOH . 
H 5 HOH A 86 351 351 HOH HOH . 
H 5 HOH A 87 352 352 HOH HOH . 
H 5 HOH A 88 353 353 HOH HOH . 
H 5 HOH A 89 354 354 HOH HOH . 
H 5 HOH A 90 355 355 HOH HOH . 
H 5 HOH A 91 356 356 HOH HOH . 
H 5 HOH A 92 357 357 HOH HOH . 
H 5 HOH A 93 358 358 HOH HOH . 
H 5 HOH A 94 359 359 HOH HOH . 
H 5 HOH A 95 360 360 HOH HOH . 
H 5 HOH A 96 361 361 HOH HOH . 
H 5 HOH A 97 362 362 HOH HOH . 
H 5 HOH A 98 363 363 HOH HOH . 
H 5 HOH A 99 364 364 HOH HOH . 
H 5 HOH A 100 365 365 HOH HOH . 
H 5 HOH A 101 366 366 HOH HOH . 
H 5 HOH A 102 367 367 HOH HOH . 
H 5 HOH A 103 368 368 HOH HOH . 
H 5 HOH A 104 369 369 HOH HOH . 
H 5 HOH A 105 370 370 HOH HOH . 
H 5 HOH A 106 371 371 HOH HOH . 
H 5 HOH A 107 372 372 HOH HOH . 
H 5 HOH A 108 373 373 HOH HOH . 
H 5 HOH A 109 374 374 HOH HOH . 
H 5 HOH A 110 375 375 HOH HOH . 
H 5 HOH A 111 376 376 HOH HOH . 
H 5 HOH A 112 377 377 HOH HOH . 
H 5 HOH A 113 378 378 HOH HOH . 
H 5 HOH A 114 379 379 HOH HOH . 
H 5 HOH A 115 380 380 HOH HOH . 
H 5 HOH A 116 381 381 HOH HOH . 
H 5 HOH A 117 382 382 HOH HOH . 
H 5 HOH A 118 383 383 HOH HOH . 
H 5 HOH A 119 384 384 HOH HOH . 
H 5 HOH A 120 385 385 HOH HOH . 
H 5 HOH A 121 386 386 HOH HOH . 
H 5 HOH A 122 387 387 HOH HOH . 
H 5 HOH A 123 388 388 HOH HOH . 
H 5 HOH A 124 389 389 HOH HOH . 
H 5 HOH A 125 390 390 HOH HOH . 
H 5 HOH A 126 391 391 HOH HOH . 
H 5 HOH A 127 392 392 HOH HOH . 
H 5 HOH A 128 393 393 HOH HOH . 
H 5 HOH A 129 394 394 HOH HOH . 
H 5 HOH A 130 395 395 HOH HOH . 
H 5 HOH A 131 396 396 HOH HOH . 
H 5 HOH A 132 397 397 HOH HOH . 
H 5 HOH A 133 398 398 HOH HOH . 
H 5 HOH A 134 399 399 HOH HOH . 
H 5 HOH A 135 400 400 HOH HOH . 
H 5 HOH A 136 401 401 HOH HOH . 
H 5 HOH A 137 402 402 HOH HOH . 
H 5 HOH A 138 403 403 HOH HOH . 
H 5 HOH A 139 404 404 HOH HOH . 
H 5 HOH A 140 405 405 HOH HOH . 
H 5 HOH A 141 406 406 HOH HOH . 
H 5 HOH A 142 407 407 HOH HOH . 
H 5 HOH A 143 408 408 HOH HOH . 
H 5 HOH A 144 409 409 HOH HOH . 
H 5 HOH A 145 410 410 HOH HOH . 
H 5 HOH A 146 411 411 HOH HOH . 
H 5 HOH A 147 412 412 HOH HOH . 
H 5 HOH A 148 413 413 HOH HOH . 
H 5 HOH A 149 414 414 HOH HOH . 
H 5 HOH A 150 415 415 HOH HOH . 
H 5 HOH A 151 416 416 HOH HOH . 
H 5 HOH A 152 417 417 HOH HOH . 
H 5 HOH A 153 418 418 HOH HOH . 
H 5 HOH A 154 419 419 HOH HOH . 
H 5 HOH A 155 420 420 HOH HOH . 
H 5 HOH A 156 421 421 HOH HOH . 
H 5 HOH A 157 422 422 HOH HOH . 
H 5 HOH A 158 423 423 HOH HOH . 
H 5 HOH A 159 424 424 HOH HOH . 
H 5 HOH A 160 425 425 HOH HOH . 
H 5 HOH A 161 426 426 HOH HOH . 
H 5 HOH A 162 427 427 HOH HOH . 
H 5 HOH A 163 428 428 HOH HOH . 
H 5 HOH A 164 429 429 HOH HOH . 
H 5 HOH A 165 430 430 HOH HOH . 
H 5 HOH A 166 431 431 HOH HOH . 
H 5 HOH A 167 432 432 HOH HOH . 
H 5 HOH A 168 433 433 HOH HOH . 
H 5 HOH A 169 434 434 HOH HOH . 
H 5 HOH A 170 435 435 HOH HOH . 
H 5 HOH A 171 436 436 HOH HOH . 
H 5 HOH A 172 437 437 HOH HOH . 
H 5 HOH A 173 438 438 HOH HOH . 
H 5 HOH A 174 439 439 HOH HOH . 
H 5 HOH A 175 440 440 HOH HOH . 
H 5 HOH A 176 441 441 HOH HOH . 
H 5 HOH A 177 442 442 HOH HOH . 
H 5 HOH A 178 443 443 HOH HOH . 
H 5 HOH A 179 444 444 HOH HOH . 
H 5 HOH A 180 445 445 HOH HOH . 
H 5 HOH A 181 446 446 HOH HOH . 
H 5 HOH A 182 447 447 HOH HOH . 
H 5 HOH A 183 448 448 HOH HOH . 
H 5 HOH A 184 449 449 HOH HOH . 
H 5 HOH A 185 450 450 HOH HOH . 
H 5 HOH A 186 451 451 HOH HOH . 
H 5 HOH A 187 452 452 HOH HOH . 
H 5 HOH A 188 453 453 HOH HOH . 
H 5 HOH A 189 454 454 HOH HOH . 
H 5 HOH A 190 455 455 HOH HOH . 
H 5 HOH A 191 456 456 HOH HOH . 
H 5 HOH A 192 457 457 HOH HOH . 
H 5 HOH A 193 458 458 HOH HOH . 
H 5 HOH A 194 459 459 HOH HOH . 
H 5 HOH A 195 460 460 HOH HOH . 
H 5 HOH A 196 461 461 HOH HOH . 
H 5 HOH A 197 462 462 HOH HOH . 
H 5 HOH A 198 463 463 HOH HOH . 
H 5 HOH A 199 464 464 HOH HOH . 
H 5 HOH A 200 465 465 HOH HOH . 
H 5 HOH A 201 466 466 HOH HOH . 
H 5 HOH A 202 467 467 HOH HOH . 
H 5 HOH A 203 468 468 HOH HOH . 
H 5 HOH A 204 469 469 HOH HOH . 
H 5 HOH A 205 470 470 HOH HOH . 
H 5 HOH A 206 471 471 HOH HOH . 
H 5 HOH A 207 472 472 HOH HOH . 
H 5 HOH A 208 473 473 HOH HOH . 
H 5 HOH A 209 474 474 HOH HOH . 
H 5 HOH A 210 475 475 HOH HOH . 
H 5 HOH A 211 476 476 HOH HOH . 
H 5 HOH A 212 477 477 HOH HOH . 
H 5 HOH A 213 478 478 HOH HOH . 
H 5 HOH A 214 479 479 HOH HOH . 
H 5 HOH A 215 480 480 HOH HOH . 
H 5 HOH A 216 481 481 HOH HOH . 
H 5 HOH A 217 482 482 HOH HOH . 
H 5 HOH A 218 483 483 HOH HOH . 
H 5 HOH A 219 484 484 HOH HOH . 
H 5 HOH A 220 485 485 HOH HOH . 
H 5 HOH A 221 486 486 HOH HOH . 
H 5 HOH A 222 487 487 HOH HOH . 
H 5 HOH A 223 488 488 HOH HOH . 
H 5 HOH A 224 489 489 HOH HOH . 
H 5 HOH A 225 490 490 HOH HOH . 
H 5 HOH A 226 491 491 HOH HOH . 
H 5 HOH A 227 492 492 HOH HOH . 
H 5 HOH A 228 493 493 HOH HOH . 
H 5 HOH A 229 494 494 HOH HOH . 
H 5 HOH A 230 495 495 HOH HOH . 
H 5 HOH A 231 496 496 HOH HOH . 
H 5 HOH A 232 497 497 HOH HOH . 
H 5 HOH A 233 498 498 HOH HOH . 
H 5 HOH A 234 499 499 HOH HOH . 
H 5 HOH A 235 500 500 HOH HOH . 
H 5 HOH A 236 501 501 HOH HOH . 
H 5 HOH A 237 502 502 HOH HOH . 
H 5 HOH A 238 503 503 HOH HOH . 
H 5 HOH A 239 504 504 HOH HOH . 
H 5 HOH A 240 505 505 HOH HOH . 
H 5 HOH A 241 506 506 HOH HOH . 
H 5 HOH A 242 507 507 HOH HOH . 
H 5 HOH A 243 508 508 HOH HOH . 
H 5 HOH A 244 509 509 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           I 
_atom_site.label_atom_id         I 
_atom_site.label_comp_id         IOD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          A 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               30.106 
_atom_site.Cartn_y               -0.593 
_atom_site.Cartn_z               -6.75 
_atom_site.occupancy             0.51 
_atom_site.B_iso_or_equiv        17.1 
_atom_site.pdbx_formal_charge    -1 
_atom_site.auth_atom_id          I 
_atom_site.auth_comp_id          IOD 
_atom_site.auth_seq_id           262 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           259 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#